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MarkerCard for AFM269xg5


Location

Synonyms
  • RH617
  • D19S409
  • RH13584
  • RH72457
  • STS1844
  • STS29071
  • stSG1028
  • AFM269xg5
  • SHGC-2305
  • * AFM269xg5
  • SHGC-pending:RH617:a
  • SHGC-pending:RH617:b

Marker types
  • STS mapped on RH map
  • Polymorphic marker
  • STS mapped on YAC contig

External Links --
Radiation Hybrid Mapping

According to:
AFM269xg5 (G3 panel) from Stanford
Location (cR10,000):1046 cR
Bin 14

AFM269xg5 (G3 panel) from GeneMap
Location (cR10,000):1057 cR
Lod Score:F
Data obtained from:Stanford Human Genome Center
Marker type:microsatellite
RHDB ID RH617
Linkage Mapping

According to:
Entry AFM269xg5 from Genethon
Location:51.0 cM
Heterozygosity:0.60
Number of Alleles:5
Allele Size Range:167 - 177 bp
Entry * AFM269xg5 from Marshfield
Location:51.88 cM
Heterozygosity:0.60
Allele Size Range:167 - 177 bp
STS to YAC Content Mapping

According to:
Entry AFM269XG5 from Whitehead
YAC Contig Name:WC19.2
Sequences

According to:

Entry AFM269xg5 from Genethon
CA strand primer:GGGGGGCTGATTAGTG
GT strand primer:CAACCCCCAAAGGATG
Allele Size Range:167 - 177 bp
Full Sequence

Entry AFM269XG5 from Whitehead
Left strand primer:GGGGGGCTGATTAGTG
Right strand primer:CAACCCCCAAAGGATG
Product Size:172

Primer 1:TGTCTTTCCAGACAATGGTC
Primer 2:GCACCTGTGGAGTGTACAGT
Product Size:288

GeneMap Primers:
Left strand primer:TGTCTTTCCAGACAATGGTC
Right strand primer:GCACCTGTGGAGTGTACAGT
Product Size:288