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Display genomic neighborhood for:

gene
enhancer
genomic coordinates

   GeneLoc map region for Chromosome 5 (21,443,586 - 25,528,597 bp) around "PRDM9"


GenesEnhancers
#
#
Location
Location
Strand
Strand
Gene
Gene
Enhancer ID
Enhancer ID
Unigene cluster
Unigene cluster
Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
Description
Description
1chr5: 21,458,872-21,460,600

GH05J021458



2chr5: 21,460,801-21,461,000

GH05J021460



3chr5: 21,480,859-21,480,889 + PIR60777
Exon structure





4chr5: 21,481,327-21,484,011 - ENSG00000233974
Exon structure



ENSG00000233974
5chr5: 21,481,485-21,481,515 + PIR42292
Exon structure





6chr5: 21,481,525-21,481,556 + PIR57807
Exon structure





7chr5: 21,481,711-21,481,740 + PIR32572
Exon structure





8chr5: 21,481,722-21,481,761 + PIR31261
Exon structure





9chr5: 21,481,831-21,481,863 + PIR59279
Exon structure





10chr5: 21,482,063-21,482,094 + PIR39215
Exon structure





11chr5: 21,482,145-21,482,171 + PIR45160
Exon structure





12chr5: 21,482,834-21,482,863 + PIR48872
Exon structure





13chr5: 21,488,271-21,488,299 + PIR33275
Exon structure





14chr5: 21,493,436-21,494,596 + ENSG00000279107
Exon structure



ENSG00000279107
15chr5: 21,493,583-21,493,953 + GC05P021686




16chr5: 21,495,102-21,495,130 + PIR44115
Exon structure





17chr5: 21,503,000-21,503,027 + PIR32825
Exon structure





18chr5: 21,522,141-21,528,783 + GC05P021691




19chr5: 21,528,443-21,528,472 + GC05P021688




20chr5: 21,528,443-21,528,472 + PIR50862
Exon structure





21chr5: 21,528,443-21,528,472 + GC05P021689




22chr5: 21,550,231-21,552,235 - GC05M021550




23chr5: 21,569,755-21,570,045 + ENSG00000272130
Exon structure



ENSG00000272130
24chr5: 21,581,092-21,582,420 + GC05P021687




25chr5: 21,588,854-21,588,881 + PIR32648
Exon structure





26chr5: 21,613,274-21,615,432

GH05J021613



27chr5: 21,615,452-21,615,641

GH05J021615



28chr5: 21,616,247-21,779,522 + LOC105374685
Exon structure


105374685 ENSG00000253766
29chr5: 21,679,685-21,681,140

GH05J021679



30chr5: 21,688,772-21,688,921

GH05J021688



31chr5: 21,750,673-22,853,622 - CDH12
Exon structure

Hs.113684 1010 ENSG00000154162 cadherin 12
32chr5: 21,774,151-21,775,637

GH05J021774



33chr5: 21,807,200-21,807,401

GH05J021807



34chr5: 21,808,072-21,808,201

GH05J021808



35chr5: 21,823,357-21,823,694

GH05J021823



36chr5: 21,823,363-21,826,613 + LOC105374683
Exon structure


105374683

37chr5: 21,882,517-21,884,766 + HSPD1P1
Exon structure


643300 ENSG00000213430 heat shock protein family D (Hsp60) member 1 pseudogene 1
38chr5: 21,971,703-21,972,039 - GC05M021971




39chr5: 21,971,703-21,972,039 - GC05M021972




40chr5: 22,015,001-22,015,400

GH05J022015



41chr5: 22,139,247-22,141,468 - ENSG00000253104
Exon structure



ENSG00000253104
42chr5: 22,142,352-22,152,356 + PMCHL1
Exon structure

Hs.247975 5369 ENSG00000168967 pro-melanin concentrating hormone like 1 (pseudogene)
43chr5: 22,181,537-22,191,675

GH05J022181



44chr5: 22,191,849-22,197,228

GH05J022191



45chr5: 22,212,449-22,216,197 + LOC105374682
Exon structure


105374682

46chr5: 22,212,759-22,212,818

GH05J022212



47chr5: 22,354,533-22,354,706 + GC05P022354




48chr5: 22,354,533-22,354,706 + GC05P022355




49chr5: 22,372,122-22,372,797

GH05J022372



50chr5: 22,480,849-22,481,878 + GC05P022480




51chr5: 22,560,080-22,560,629

GH05J022560



52chr5: 22,574,914-22,589,298 + LOC105374681
Exon structure


105374681

53chr5: 22,580,225-22,581,075 - GCNT1P2
Exon structure


100421560 ENSG00000249206 glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2
54chr5: 22,596,139-22,597,161

GH05J022596



55chr5: 22,620,667-22,621,841

GH05J022620



56chr5: 22,621,487-22,623,067 - GC05M022621




57chr5: 22,621,557-22,623,534 + GC05P022621




58chr5: 22,648,672-22,649,583

GH05J022648



59chr5: 22,692,971-23,250,522 - GC05M022692




60chr5: 22,754,448-22,760,403 + LOC101929617
Exon structure


101929617

61chr5: 22,770,079-22,771,108 - GC05M022770




62chr5: 22,852,801-22,853,001

GH05J022852



63chr5: 22,853,200-22,853,600

GH05J022853



64chr5: 22,928,918-22,929,451

GH05J022928



65chr5: 23,012,801-23,013,800

GH05J023012



66chr5: 23,013,048-23,014,527 + ENSG00000249404
Exon structure



ENSG00000249404
67chr5: 23,039,054-23,093,949 + LOC105374686
Exon structure


105374686

68chr5: 23,159,844-23,171,595 - LOC105374687
Exon structure


105374687

69chr5: 23,169,706-23,169,960

GH05J023169



70chr5: 23,201,445-23,201,727 + GC05P023204




71chr5: 23,209,092-23,209,201

GH05J023209



72chr5: 23,233,940-23,234,875

GH05J023233



73chr5: 23,262,159-23,263,185 - LOC100420804
Exon structure


100420804 ENSG00000250319
74chr5: 23,299,154-23,299,260 + GC05P023299




75chr5: 23,299,155-23,299,262 + ENSG00000206912
Exon structure



ENSG00000206912
76chr5: 23,303,565-23,305,342 - LOC391771
Exon structure


391771 ENSG00000250332
77chr5: 23,303,657-23,303,680

GH05J023303



78chr5: 23,314,452-23,315,576

GH05J023314



79chr5: 23,329,427-23,329,892 - ENSG00000249289
Exon structure



ENSG00000249289
80chr5: 23,344,658-23,349,272 - LOC105374688
Exon structure


105374688

81chr5: 23,352,592-23,352,721

GH05J023352



82chr5: 23,389,827-23,390,362

GH05J023389



83chr5: 23,412,092-23,412,241

GH05J023412



84chr5: 23,419,192-23,419,341

GH05J023419



85chr5: 23,443,480-23,443,539

GH05J023443



86chr5: 23,443,586-23,528,597 + PRDM9
Exon structure

Hs.283096 56979 ENSG00000164256 PR/SET domain 9
87chr5: 23,456,468-23,456,850 + ENSG00000248591
Exon structure



ENSG00000248591
88chr5: 23,465,734-23,467,378

GH05J023465



89chr5: 23,468,224-23,468,254 + GC05P023468




90chr5: 23,507,000-23,507,601

GH05J023507



91chr5: 23,527,332-23,527,481

GH05J023528



92chr5: 23,527,652-23,527,761

GH05J023527



93chr5: 23,630,937-23,632,091

GH05J023630



94chr5: 23,688,927-23,689,386 + ENSG00000249607
Exon structure



ENSG00000249607
95chr5: 23,690,531-23,690,562 - PIR39225
Exon structure





96chr5: 23,951,348-24,201,313 + C5orf17
Exon structure

Hs.638078 439936 ENSG00000248874 chromosome 5 open reading frame 17 (putative)
97chr5: 23,972,188-23,972,294 - ENSG00000252083
Exon structure



ENSG00000252083
98chr5: 23,980,587-23,980,938 + ENSG00000234865
Exon structure



ENSG00000234865
99chr5: 23,994,502-23,994,603 - ENSG00000200600
Exon structure



ENSG00000200600
100chr5: 23,994,503-23,994,603 - GC05M023994




101chr5: 24,065,932-24,066,081

GH05J024065



102chr5: 24,132,697-24,133,042

GH05J024132



103chr5: 24,155,672-24,155,832

GH05J024155



104chr5: 24,161,784-24,161,841

GH05J024161



105chr5: 24,163,172-24,163,247

GH05J024163



106chr5: 24,170,190-24,172,277 - LOC503540
Exon structure


503540

107chr5: 24,170,370-24,171,246 + LOC100130746
Exon structure


100130746 ENSG00000226432
108chr5: 24,208,103-24,209,121

GH05J024208



109chr5: 24,258,995-24,260,743

GH05J024258



110chr5: 24,263,682-24,265,943

GH05J024263



111chr5: 24,266,363-24,269,336

GH05J024266



112chr5: 24,272,857-24,273,199

GH05J024272



113chr5: 24,283,173-24,283,532

GH05J024283



114chr5: 24,285,974-24,296,050

GH05J024285



115chr5: 24,291,916-24,323,113 + LOC105374689
Exon structure


105374689

116chr5: 24,352,309-24,353,443 - ENSG00000250694
Exon structure



ENSG00000250694
117chr5: 24,381,660-24,382,381

GH05J024381



118chr5: 24,449,351-24,449,615 - ENSG00000277455
Exon structure



ENSG00000277455
119chr5: 24,451,403-24,451,437 + PIR31830
Exon structure





120chr5: 24,487,100-24,645,024 - CDH10
Exon structure

Hs.92489 1008 ENSG00000040731 cadherin 10
121chr5: 24,547,272-24,547,421

GH05J024547



122chr5: 24,549,304-24,549,570

GH05J024549



123chr5: 24,554,018-24,613,222 + ENSG00000251294
Exon structure



ENSG00000251294
124chr5: 24,567,005-24,567,023

GH05J024567



125chr5: 24,578,294-24,578,561 - ENSG00000249562
Exon structure



ENSG00000249562
126chr5: 24,579,162-24,579,439

GH05J024579



127chr5: 24,585,636-24,585,667 + GC05P024585




128chr5: 24,595,388-24,595,766

GH05J024595



129chr5: 24,614,563-24,614,950

GH05J024614



130chr5: 24,643,858-24,643,905 - GC05M024643




131chr5: 24,644,572-24,645,381

GH05J024644



132chr5: 24,740,052-24,740,218

GH05J024740



133chr5: 24,749,289-24,749,895 - LOC100422502
Exon structure


100422502 ENSG00000250099
134chr5: 24,749,374-24,749,772 - GC05M024751




135chr5: 24,786,842-24,787,024 - BTG4P1
Exon structure


106480330 ENSG00000248156 BTG anti-proliferation factor 4 pseudogene 1
136chr5: 24,788,452-24,790,327

GH05J024788



137chr5: 24,803,870-24,805,001

GH05J024803



138chr5: 24,811,480-24,811,548 + GC05P024811




139chr5: 24,811,481-24,811,548 + ENSG00000223004
Exon structure



ENSG00000223004
140chr5: 24,835,280-24,840,583 - LINC02239
Exon structure

Hs.145181 340107 ENSG00000248908 long intergenic non-protein coding RNA 2239
141chr5: 24,881,943-24,885,461 - ENSG00000250524
Exon structure



ENSG00000250524
142chr5: 24,910,593-24,910,693 + GC05P024910




143chr5: 24,910,594-24,910,695 + ENSG00000199911
Exon structure



ENSG00000199911
144chr5: 25,061,203-25,105,441 - GC05M025061




145chr5: 25,087,450-25,190,956 - LINC02228
Exon structure


105374694 ENSG00000251273 long intergenic non-protein coding RNA 2228
146chr5: 25,097,955-25,098,072

GH05J025097



147chr5: 25,149,829-25,380,155 + GC05P025149




148chr5: 25,187,800-25,520,991 + LINC02211
Exon structure


105374693 ENSG00000245662 long intergenic non-protein coding RNA 2211
149chr5: 25,188,059-25,188,778 - ENSG00000285042
Exon structure



ENSG00000285042
150chr5: 25,188,601-25,191,000

GH05J025188



151chr5: 25,189,499-25,189,594 + GC05P025189




152chr5: 25,218,633-25,218,661 - PIR62044
Exon structure





153chr5: 25,218,973-25,298,612 - ENSG00000251654
Exon structure



ENSG00000251654
154chr5: 25,306,231-25,391,030 - GC05M025306




155chr5: 25,319,834-25,321,346 + ENSG00000260761
Exon structure



ENSG00000260761
156chr5: 25,345,442-25,345,941

GH05J025345



157chr5: 25,349,841-25,350,073 + ENSG00000279671
Exon structure



ENSG00000279671
158chr5: 25,362,732-25,363,289

GH05J025362



159chr5: 25,404,733-25,445,925 - ENSG00000248605
Exon structure



ENSG00000248605
160chr5: 25,425,412-25,425,599 - ENSG00000279531
Exon structure



ENSG00000279531
161chr5: 25,443,028-25,443,390

GH05J025443



162chr5: 25,445,313-25,446,696

GH05J025445



163chr5: 25,447,692-25,449,819

GH05J025447