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Display genomic neighborhood for:

gene
enhancer
genomic coordinates

   GeneLoc map region for Chromosome 3 (106,822,698 - 110,855,005 bp) around "TRAT1"


GenesEnhancers
#
#
Location
Location
Strand
Strand
Gene
Gene
Enhancer ID
Enhancer ID
Unigene cluster
Unigene cluster
Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
Description
Description
1chr3: 106,824,446-106,828,752

GH03J106824



2chr3: 106,829,048-106,832,334

GH03J106829



3chr3: 106,836,811-107,240,641 - LINC00882
Exon structure

Hs.648607 100302640 ENSG00000242759 long intergenic non-protein coding RNA 882
4chr3: 106,837,014-106,837,163

GH03J106837



5chr3: 106,839,358-106,840,647

GH03J106839



6chr3: 106,841,736-106,843,058

GH03J106841



7chr3: 106,848,606-106,851,680

GH03J106848



8chr3: 106,848,671-106,849,260 + FCF1P3
Exon structure


100128733 ENSG00000239997 FCF1 pseudogene 3
9chr3: 106,859,410-106,863,465

GH03J106859



10chr3: 106,876,041-106,876,702

GH03J106876



11chr3: 106,876,778-106,877,985

GH03J106877



12chr3: 106,878,207-106,881,927

GH03J106878



13chr3: 106,888,296-106,889,098

GH03J106888



14chr3: 106,894,142-106,894,213 - GC03M106937




15chr3: 106,894,351-106,895,718 - MTND4P16
Exon structure


100873241 ENSG00000241787 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 16
16chr3: 106,895,729-106,896,408 - MTND4LP3
Exon structure


107075245 ENSG00000239632 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L pseudogene 3
17chr3: 106,896,477-106,896,821 - MTND3P6
Exon structure


100873182 ENSG00000242214 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 pseudogene 6
18chr3: 106,896,891-106,897,671 - MTCO3P35
Exon structure


107075287 ENSG00000242836 mitochondrially encoded cytochrome c oxidase III pseudogene 35
19chr3: 106,897,318-106,897,344 - PIR35607
Exon structure





20chr3: 106,897,671-106,898,268 - MTATP6P22
Exon structure


107075202 ENSG00000249580 mitochondrially encoded ATP synthase 6 pseudogene 22
21chr3: 106,898,889-106,900,591 + MTND5P16
Exon structure


100862854 ENSG00000243658 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 pseudogene 16
22chr3: 106,900,593-106,900,855 - MTND6P6
Exon structure


106478944 ENSG00000240034 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 pseudogene 6
23chr3: 106,900,854-106,901,081 - MTCO1P35
Exon structure


107075234 ENSG00000250630 mitochondrially encoded cytochrome c oxidase I pseudogene 35
24chr3: 106,901,068-106,901,965 + MTND1P16
Exon structure


100873213 ENSG00000239586 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 16
25chr3: 106,902,030-106,902,102 - GC03M106941




26chr3: 106,902,031-106,902,102 - NMTRQ-TTG4-1
Exon structure


100189489
nuclear-encoded mitochondrial transfer RNA-Gln (TTG) 4-1
27chr3: 106,902,173-106,902,523 + MTND2P14
Exon structure


100873223 ENSG00000240796 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 pseudogene 14
28chr3: 106,912,350-106,914,788

GH03J106912



29chr3: 106,922,055-106,924,128 - GC03M106942




30chr3: 106,925,260-106,925,287 + PIR33156
Exon structure





31chr3: 107,001,714-107,001,863

GH03J107001



32chr3: 107,007,568-107,007,670 + RNU6-1308P
Exon structure


106480137 ENSG00000252626 RNA, U6 small nuclear 1308, pseudogene
33chr3: 107,039,001-107,041,649 - GC03M107039




34chr3: 107,045,994-107,046,040

GH03J107045



35chr3: 107,062,801-107,063,601

GH03J107062



36chr3: 107,064,001-107,065,600

GH03J107064



37chr3: 107,104,911-107,107,199 - LOC344593
Exon structure


344593 ENSG00000239455
38chr3: 107,118,002-107,118,923

GH03J107118



39chr3: 107,124,506-107,125,683

GH03J107124



40chr3: 107,132,903-107,134,249

GH03J107132



41chr3: 107,141,526-107,144,045

GH03J107141



42chr3: 107,197,282-107,200,441

GH03J107197



43chr3: 107,206,232-107,212,724

GH03J107206



44chr3: 107,213,870-107,213,888

GH03J107213



45chr3: 107,215,531-107,219,917

GH03J107215



46chr3: 107,220,279-107,224,350

GH03J107220



47chr3: 107,225,541-107,225,830

GH03J107225



48chr3: 107,226,333-107,228,062

GH03J107226



49chr3: 107,235,201-107,237,565

GH03J107235



50chr3: 107,240,001-107,242,601

GH03J107240



51chr3: 107,240,692-107,326,964 + DUBR
Exon structure

Hs.543039 344595 ENSG00000243701 DPPA2 upstream binding RNA
52chr3: 107,248,374-107,251,831 - GC03M107248




53chr3: 107,248,941-107,251,453 + GC03P107248




54chr3: 107,251,315-107,252,713

GH03J107251



55chr3: 107,262,618-107,265,678

GH03J107262



56chr3: 107,269,283-107,269,485

GH03J107269



57chr3: 107,270,118-107,270,872

GH03J107271



58chr3: 107,270,917-107,273,263

GH03J107270



59chr3: 107,272,611-107,421,304 - LOC101929579
Exon structure


101929579 ENSG00000239828
60chr3: 107,285,314-107,285,483

GH03J107285



61chr3: 107,327,830-107,329,197 - LOC649024
Exon structure


649024 ENSG00000241218
62chr3: 107,329,430-107,329,962 + ENSG00000272597
Exon structure



ENSG00000272597
63chr3: 107,347,627-107,348,648

GH03J107347



64chr3: 107,366,659-107,368,026

GH03J107366



65chr3: 107,377,194-107,378,637 + CCDC54
Exon structure

Hs.164799 84692 ENSG00000138483 coiled-coil domain containing 54
66chr3: 107,384,291-107,385,449

GH03J107384



67chr3: 107,387,555-107,387,853

GH03J107387



68chr3: 107,392,177-107,393,543

GH03J107392



69chr3: 107,403,862-107,406,060

GH03J107403



70chr3: 107,411,703-107,412,851

GH03J107411



71chr3: 107,421,001-107,421,401

GH03J107421



72chr3: 107,428,340-107,432,769

GH03J107428



73chr3: 107,430,930-107,463,912 + LINC01990
Exon structure


101929607 ENSG00000273125 long intergenic non-protein coding RNA 1990
74chr3: 107,432,814-107,432,963

GH03J107432



75chr3: 107,521,742-107,526,332

GH03J107521



76chr3: 107,522,936-107,811,329 + BBX
Exon structure

Hs.124366 56987 ENSG00000114439 BBX, HMG-box containing
77chr3: 107,597,759-107,600,451

GH03J107597



78chr3: 107,619,601-107,619,800

GH03J107619



79chr3: 107,629,697-107,629,986

GH03J107629



80chr3: 107,633,358-107,634,434

GH03J107633



81chr3: 107,657,763-107,658,074

GH03J107657



82chr3: 107,661,303-107,664,429

GH03J107661



83chr3: 107,684,469-107,685,705

GH03J107684



84chr3: 107,695,329-107,702,031 + GC03P107695




85chr3: 107,697,801-107,698,200

GH03J107697



86chr3: 107,710,486-107,711,340

GH03J107710



87chr3: 107,711,466-107,711,685

GH03J107711



88chr3: 107,785,564-107,785,884

GH03J107785



89chr3: 107,809,925-107,811,360

GH03J107809



90chr3: 107,824,794-107,824,943

GH03J107824



91chr3: 107,825,120-107,825,420

GH03J107825



92chr3: 107,834,397-107,834,723

GH03J107834



93chr3: 107,840,228-107,882,000 - LINC00635
Exon structure

Hs.159043 151658 ENSG00000241469 long intergenic non-protein coding RNA 635
94chr3: 107,845,557-107,845,571

GH03J107845



95chr3: 107,846,074-107,846,600

GH03J107846



96chr3: 107,862,014-107,862,163

GH03J107862



97chr3: 107,883,205-107,928,907 + LINC00636
Exon structure

Hs.737218; Hs.134882 285205 ENSG00000240423 long intergenic non-protein coding RNA 636
98chr3: 107,910,994-107,911,307

GH03J107910



99chr3: 107,927,074-107,928,600

GH03J107927



100chr3: 107,938,449-107,938,547

GH03J107938



101chr3: 107,942,341-107,942,567

GH03J107942



102chr3: 107,943,454-107,943,583

GH03J107943



103chr3: 107,944,158-107,944,402

GH03J107944



104chr3: 107,956,712-107,958,559

GH03J107956



105chr3: 107,962,560-107,963,429

GH03J107962



106chr3: 107,969,570-107,971,222

GH03J107969



107chr3: 107,975,444-107,976,659

GH03J107975



108chr3: 107,978,299-107,979,257

GH03J107978



109chr3: 107,980,985-107,982,439

GH03J107980



110chr3: 107,985,400-107,994,691

GH03J107985



111chr3: 107,998,734-107,999,820

GH03J107998



112chr3: 108,000,452-108,002,513

GH03J108000



113chr3: 108,004,401-108,005,200

GH03J108004



114chr3: 108,005,963-108,007,765

GH03J108005



115chr3: 108,008,254-108,008,403

GH03J108008



116chr3: 108,009,029-108,009,238

GH03J108009



117chr3: 108,021,668-108,023,924

GH03J108021



118chr3: 108,028,721-108,030,640

GH03J108028



119chr3: 108,031,003-108,032,261 - ENSG00000284828
Exon structure



ENSG00000284828
120chr3: 108,035,401-108,035,600

GH03J108035



121chr3: 108,035,802-108,037,610

GH03J108036



122chr3: 108,036,718-108,038,445 - ENSG00000279277
Exon structure



ENSG00000279277
123chr3: 108,043,094-108,091,862 - CD47
Exon structure

Hs.446414 961 ENSG00000196776 CD47 molecule
124chr3: 108,045,481-108,048,432

GH03J108045



125chr3: 108,052,899-108,053,920

GH03J108052



126chr3: 108,056,674-108,058,055

GH03J108056



127chr3: 108,059,934-108,060,901

GH03J108059



128chr3: 108,062,023-108,062,485

GH03J108062



129chr3: 108,065,799-108,068,697

GH03J108065



130chr3: 108,067,191-108,069,775 - GC03M108067




131chr3: 108,068,718-108,070,323

GH03J108068



132chr3: 108,072,460-108,074,477

GH03J108072



133chr3: 108,083,550-108,083,867

GH03J108083



134chr3: 108,087,122-108,093,312

GH03J108087



135chr3: 108,096,383-108,097,473

GH03J108096



136chr3: 108,097,992-108,122,067 + LOC105374031
Exon structure


105374031

137chr3: 108,098,650-108,102,114

GH03J108098



138chr3: 108,102,201-108,102,855

GH03J108102



139chr3: 108,103,247-108,108,242

GH03J108103



140chr3: 108,117,059-108,120,516

GH03J108117



141chr3: 108,123,016-108,129,193

GH03J108123



142chr3: 108,125,064-108,138,610 + LINC01215
Exon structure


101929623 ENSG00000271856 long intergenic non-protein coding RNA 1215
143chr3: 108,125,199-108,129,088 - GC03M108125




144chr3: 108,129,907-108,134,944

GH03J108129



145chr3: 108,136,259-108,137,810

GH03J108136



146chr3: 108,139,770-108,141,524

GH03J108139



147chr3: 108,152,397-108,152,671

GH03J108152



148chr3: 108,153,401-108,153,801

GH03J108153



149chr3: 108,158,342-108,158,572

GH03J108158



150chr3: 108,160,812-108,222,570 - IFT57
Exon structure

Hs.412196 55081 ENSG00000114446 intraflagellar transport 57
151chr3: 108,179,862-108,180,658

GH03J108179



152chr3: 108,208,416-108,210,345

GH03J108208



153chr3: 108,219,345-108,225,096

GH03J108219



154chr3: 108,234,534-108,234,683

GH03J108234



155chr3: 108,250,054-108,252,146

GH03J108250



156chr3: 108,284,360-108,285,979

GH03J108284



157chr3: 108,292,570-108,293,729

GH03J108292



158chr3: 108,293,974-108,293,984

GH03J108293



159chr3: 108,295,486-108,300,922

GH03J108295



160chr3: 108,296,485-108,388,971 + HHLA2
Exon structure

Hs.252351 11148 ENSG00000114455 HERV-H LTR-associating 2
161chr3: 108,312,001-108,312,200

GH03J108312



162chr3: 108,325,508-108,326,814 - HNRNPA1P17
Exon structure


100421376 ENSG00000243188 heterogeneous nuclear ribonucleoprotein A1 pseudogene 17
163chr3: 108,346,001-108,346,200

GH03J108346



164chr3: 108,377,667-108,394,866 - GC03M108377




165chr3: 108,380,368-108,549,465 - MYH15
Exon structure

Hs.731060 22989 ENSG00000144821 myosin heavy chain 15
166chr3: 108,387,596-108,389,281 + GC03P108387




167chr3: 108,403,414-108,403,563

GH03J108403



168chr3: 108,406,694-108,406,863

GH03J108406



169chr3: 108,441,174-108,441,323

GH03J108441



170chr3: 108,465,977-108,530,907 - GC03M108465




171chr3: 108,470,518-108,474,162

GH03J108470



172chr3: 108,477,401-108,478,000

GH03J108477



173chr3: 108,485,254-108,485,403

GH03J108485



174chr3: 108,486,633-108,487,723

GH03J108486



175chr3: 108,488,694-108,488,843

GH03J108488



176chr3: 108,489,814-108,489,963

GH03J108489



177chr3: 108,543,367-108,543,875 - RPL13P8
Exon structure


100270928 ENSG00000241634 ribosomal protein L13 pseudogene 8
178chr3: 108,545,752-108,589,644 - CIP2A
Exon structure

Hs.591308 57650 ENSG00000163507 cell proliferation regulating inhibitor of protein phosphatase 2A
179chr3: 108,552,694-108,552,843

GH03J108552



180chr3: 108,574,564-108,574,698 + GC03P108588




181chr3: 108,574,565-108,574,698 + ENSG00000202379
Exon structure



ENSG00000202379
182chr3: 108,574,683-108,575,064 + ENSG00000276763
Exon structure



ENSG00000276763
183chr3: 108,587,716-108,591,058

GH03J108587



184chr3: 108,589,490-108,694,846 + DZIP3
Exon structure

Hs.409210 9666 ENSG00000198919 DAZ interacting zinc finger protein 3
185chr3: 108,602,170-108,604,584

GH03J108602



186chr3: 108,662,294-108,662,423

GH03J108662



187chr3: 108,713,549-108,727,630 - LOC105374033
Exon structure


105374033 ENSG00000241777
188chr3: 108,742,490-108,748,179 - LOC105374034
Exon structure


105374034

189chr3: 108,743,424-108,757,384 - RETNLB
Exon structure

Hs.307047 84666 ENSG00000163515 resistin like beta
190chr3: 108,757,400-108,757,459

GH03J108757



191chr3: 108,757,494-108,757,683

GH03J108758



192chr3: 108,780,086-108,781,070

GH03J108780



193chr3: 108,805,080-108,805,223

GH03J108806



194chr3: 108,805,894-108,807,434

GH03J108805



195chr3: 108,818,489-108,819,036

GH03J108818



196chr3: 108,820,187-108,821,400

GH03J108820



197chr3: 108,821,647-108,826,651

GH03J108821



198chr3: 108,822,698-108,855,005 + TRAT1
Exon structure

Hs.138701 50852 ENSG00000163519 T cell receptor associated transmembrane adaptor 1
199chr3: 108,833,267-108,835,960

GH03J108833



200chr3: 108,840,370-108,842,995

GH03J108840



201chr3: 108,845,021-108,848,856

GH03J108845



202chr3: 108,848,953-108,850,471

GH03J108848



203chr3: 108,850,960-108,852,250

GH03J108850



204chr3: 108,859,542-108,860,773

GH03J108859



205chr3: 108,862,621-108,864,314

GH03J108862



206chr3: 108,894,755-108,942,522 + GC03P108894




207chr3: 108,907,644-108,955,188 - GUCA1C
Exon structure

Hs.233363 9626 ENSG00000138472 guanylate cyclase activator 1C
208chr3: 108,915,134-108,915,283

GH03J108915



209chr3: 108,946,714-108,946,863

GH03J108946



210chr3: 108,953,769-108,953,828

GH03J108953



211chr3: 108,958,239-109,118,146 - MORC1
Exon structure

Hs.591296 27136 ENSG00000114487 MORC family CW-type zinc finger 1
212chr3: 109,018,909-109,019,116 - ENSG00000221633
Exon structure



ENSG00000221633
213chr3: 109,018,909-109,019,116 - GC03M109019




214chr3: 109,057,575-109,058,493

GH03J109057



215chr3: 109,059,201-109,059,400

GH03J109059



216chr3: 109,070,201-109,070,800

GH03J109070



217chr3: 109,071,601-109,072,600

GH03J109071



218chr3: 109,082,000-109,082,201

GH03J109082



219chr3: 109,101,456-109,110,342 + MORC1-AS1
Exon structure


100506506 ENSG00000239314 MORC1 antisense RNA 1
220chr3: 109,118,093-109,118,152

GH03J109119



221chr3: 109,118,206-109,118,265

GH03J109118



222chr3: 109,118,252-109,150,514 + C3orf85
Exon structure

Hs.280892 401081 ENSG00000241224 chromosome 3 open reading frame 85
223chr3: 109,125,084-109,128,703

GH03J109125



224chr3: 109,132,546-109,134,483

GH03J109132



225chr3: 109,136,080-109,137,514

GH03J109136



226chr3: 109,160,892-109,162,670

GH03J109160



227chr3: 109,176,438-109,177,365 - ENSG00000261364
Exon structure



ENSG00000261364
228chr3: 109,178,165-109,185,261 + LINC00488
Exon structure

Hs.618669 677779 ENSG00000214381 long intergenic non-protein coding RNA 488
229chr3: 109,225,129-109,225,227 + RNU6-1236P
Exon structure


106481570 ENSG00000252889 RNA, U6 small nuclear 1236, pseudogene
230chr3: 109,234,454-109,234,583

GH03J109234



231chr3: 109,241,507-109,243,160 + LOC100419877
Exon structure


100419877 ENSG00000239288
232chr3: 109,256,914-109,257,879

GH03J109256



233chr3: 109,293,788-109,316,535 - DPPA2
Exon structure

Hs.351113 151871 ENSG00000163530 developmental pluripotency associated 2
234chr3: 109,295,239-109,295,498 + ENSG00000277635
Exon structure



ENSG00000277635
235chr3: 109,316,096-109,316,777

GH03J109316



236chr3: 109,325,154-109,326,064

GH03J109325



237chr3: 109,326,141-109,337,572 - DPPA4
Exon structure

Hs.317659 55211 ENSG00000121570 developmental pluripotency associated 4
238chr3: 109,332,065-109,332,091 - PIR39830
Exon structure





239chr3: 109,332,358-109,340,235

GH03J109332



240chr3: 109,346,275-109,346,830

GH03J109346



241chr3: 109,353,962-109,358,103

GH03J109353



242chr3: 109,364,047-109,364,234 - ENSG00000241257
Exon structure



ENSG00000241257
243chr3: 109,396,514-109,396,663

GH03J109396



244chr3: 109,396,613-109,397,870 + LOC100129989
Exon structure


100129989 ENSG00000244561
245chr3: 109,408,516-109,410,202 - H3F3AP3
Exon structure


100689229 ENSG00000230618 H3 histone family member 3A pseudogene 3
246chr3: 109,409,990-109,495,167 + LINC01205
Exon structure

Hs.477089 401082 ENSG00000228980 long intergenic non-protein coding RNA 1205
247chr3: 109,432,688-109,433,519

GH03J109432



248chr3: 109,471,120-109,471,857 - PPIAP15
Exon structure


5487 ENSG00000244196 peptidylprolyl isomerase A pseudogene 15
249chr3: 109,579,427-109,587,956 - GC03M109579




250chr3: 109,602,828-109,602,897 + MIR4445
Exon structure


100616129 ENSG00000265956 microRNA 4445
251chr3: 109,613,451-109,621,186 - GC03M109613




252chr3: 109,648,107-109,810,861 + ENSG00000242029
Exon structure



ENSG00000242029
253chr3: 109,684,807-109,686,315

GH03J109684



254chr3: 109,701,456-109,702,295 - DIMT1P1
Exon structure


100422385 ENSG00000271249 DIM1 dimethyladenosine transferase 1 homolog pseudogene 1
255chr3: 109,702,314-109,702,463

GH03J109702



256chr3: 109,732,014-109,732,143

GH03J109732



257chr3: 109,777,786-109,777,814 + PIR32781
Exon structure





258chr3: 109,804,511-109,808,938

GH03J109804



259chr3: 109,915,976-109,916,940 - LOC440973
Exon structure


440973 ENSG00000214380
260chr3: 109,926,159-109,928,926

GH03J109926



261chr3: 109,977,540-109,977,767 - ENSG00000243945
Exon structure



ENSG00000243945
262chr3: 109,995,494-109,995,643

GH03J109995



263chr3: 110,027,139-110,028,131

GH03J110027



264chr3: 110,069,756-110,070,990

GH03J110069



265chr3: 110,098,415-110,125,067 - GC03M110098




266chr3: 110,164,911-110,166,678

GH03J110164



267chr3: 110,180,345-110,182,159

GH03J110180



268chr3: 110,343,060-110,345,789

GH03J110343



269chr3: 110,352,803-110,353,645

GH03J110352



270chr3: 110,367,125-110,367,154 + PIR42724
Exon structure





271chr3: 110,384,714-110,384,863

GH03J110384



272chr3: 110,412,606-110,416,472

GH03J110412



273chr3: 110,418,529-110,421,791

GH03J110418



274chr3: 110,447,235-110,471,580 + LOC105374036
Exon structure


105374036

275chr3: 110,520,084-110,522,619

GH03J110520



276chr3: 110,526,206-110,529,462

GH03J110526



277chr3: 110,527,482-110,529,582 - ENSG00000240895
Exon structure



ENSG00000240895
278chr3: 110,551,844-110,551,965 - GC03M110552




279chr3: 110,551,845-110,551,965 - RNU6ATAC15P
Exon structure


106481867 ENSG00000221206 RNA, U6atac small nuclear 15, pseudogene
280chr3: 110,567,694-110,569,346

GH03J110567



281chr3: 110,575,512-110,580,418

GH03J110575



282chr3: 110,598,079-110,599,465

GH03J110598



283chr3: 110,625,494-110,625,700

GH03J110625



284chr3: 110,626,986-110,627,462

GH03J110626



285chr3: 110,638,487-110,667,287 - LOC105374037
Exon structure


105374037

286chr3: 110,654,305-110,656,412

GH03J110654



287chr3: 110,656,514-110,656,703

GH03J110656



288chr3: 110,682,216-110,683,237 - RPSAP29
Exon structure


389141 ENSG00000244722 ribosomal protein SA pseudogene 29
289chr3: 110,683,029-110,691,851 - GC03M110683




290chr3: 110,684,531-110,687,037

GH03J110684



291chr3: 110,705,553-110,716,595 + GC03P110705




292chr3: 110,709,473-110,712,643

GH03J110709



293chr3: 110,727,020-110,727,119 + GC03P110728




294chr3: 110,727,021-110,727,121 + ENSG00000201426
Exon structure



ENSG00000201426
295chr3: 110,742,874-110,743,871

GH03J110742



296chr3: 110,772,439-110,775,567

GH03J110772



297chr3: 110,810,719-110,814,312 + GC03P110810




298chr3: 110,813,220-110,816,288

GH03J110813



299chr3: 110,822,442-110,823,073

GH03J110822



300chr3: 110,827,049-110,827,233

GH03J110827



301chr3: 110,840,807-110,841,196

GH03J110840