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Display genomic neighborhood for:
genomic entity (gene/enhancer/marker)
genomic coordinates

  Chromosome 9

   GeneLoc map region (19,349,835 - 23,351,378 bp) around gene/enhancer/marker "IFNA6"

   Explanation:
   IFNA6 is located at 21,349,835-21,351,378 bp

#
#
Start (bp)
Start (bp)
End (bp)
End (bp)
Strand
Strand
Gene
Gene
Enhancer ID
Enhancer ID
Unigene cluster
Unigene cluster
Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
Description
Description
119230435 19374268 + DENND4C
Exon structure

Hs.249591 55667 ENSG00000137145 DENN domain containing 4C
219367952 19367982 + PIR43296
Exon structure





319371386 19371945 - ENSG00000272842
Exon structure



ENSG00000272842
419374743 19375392

GH09E019374



519375451 19375996 + ENSG00000273226
Exon structure



ENSG00000273226
619375715 19380254 - RPS6
Exon structure

Hs.408073 6194 ENSG00000137154 ribosomal protein S6
719375955 19376783

GH09E019375



819377163 19377312

GH09E019378



919377405 19381640

GH09E019377



1019380189 19380236 - GC09M019381




1119380189 19380236 - GC09M019380




1219383217 19383887 - NDUFA5P3
Exon structure


100288035 ENSG00000234853 NADH:ubiquinone oxidoreductase subunit A5 pseudogene 3
1319386174 19387372

GH09E019386



1419397500 19398719

GH09E019397



1519403316 19406106

GH09E019403



1619403997 19404072 + GC09P019404




1719406011 19452505 + ACER2
Exon structure

Hs.41379 340485 ENSG00000177076 alkaline ceramidase 2
1819407698 19410503

GH09E019407



1919411483 19411509

GH09E019411



2019416745 19416776 + PIR51132
Exon structure





2119424057 19424790

GH09E019424



2219431071 19432514

GH09E019431



2319441167 19442406

GH09E019441



2419445063 19447280

GH09E019445



2519451247 19452202

GH09E019451



2619453209 19455173 + ENSG00000260912
Exon structure



ENSG00000260912
2719456602 19458000

GH09E019456



2819460815 19464524 - MAP1LC3BP1
Exon structure


392288 ENSG00000231909 microtubule associated protein 1 light chain 3 beta pseudogene 1
2919464723 19464952

GH09E019464



3019465003 19465192

GH09E019465



3119470455 19562872 + LOC105375988
Exon structure


105375988

3219470663 19470812

GH09E019470



3319471423 19472400

GH09E019471



3419480889 19482970

GH09E019480



3519493001 19494092

GH09E019493



3619507452 19789695 - SLC24A2
Exon structure

Hs.590750; Hs.283014; Hs.738749 25769 ENSG00000155886 solute carrier family 24 member 2
3719551201 19551829

GH09E019551



3819557642 19557721

GH09E019557



3919589854 19589877

GH09E019589



4019598848 19603209 + GC09P019599




4119618921 19619116

GH09E019618



4219633872 19634264

GH09E019633



4319642334 19642568

GH09E019642



4419698799 19699226

GH09E019698



4519704724 19704819

GH09E019704



4619705338 19705655 + C11orf98P1
Exon structure


106480289 ENSG00000232158 chromosome 11 open reading frame 98 pseudogene 1
4719743953 19744258

GH09E019743



4819746842 19747174

GH09E019746



4919748001 19749201

GH09E019748



5019768991 19769992

GH09E019768



5119788139 19789400

GH09E019788



5219789657 19789936

GH09E019789



5319799433 19800381

GH09E019799



5419806693 19809067

GH09E019806



5519875007 19877349

GH09E019875



5619895562 19895982 - CLK3P1
Exon structure


646505 ENSG00000276667 CDC like kinase 3 pseudogene 1
5719918392 19918459

GH09E019918



5819922603 19922732

GH09E019922



5919925703 19926471

GH09E019925



6019926094 19929937 + ENSG00000261402
Exon structure



ENSG00000261402
6119934123 19935399

GH09E019934



6219957394 19958147 - ENSG00000270712
Exon structure



ENSG00000270712
6319967198 19968010 - GLRX3P1
Exon structure


100418908 ENSG00000277711 glutaredoxin 3 pseudogene 1
6419967487 19968051

GH09E019967



6519968143 19968352

GH09E019968



6619969023 19969252

GH09E019969



6719976201 19976600

GH09E019976



6819988343 19988492

GH09E019988



6919991959 19993134

GH09E019991



7019997534 20000749

GH09E019997



7120015201 20015712

GH09E020015



7220042076 20042092

GH09E020043



7320042897 20044030

GH09E020042



7420064801 20065400

GH09E020064



7520111263 20111412

GH09E020112



7620111523 20111672

GH09E020111



7720116918 20118437

GH09E020116



7820189943 20190092

GH09E020189



7920190858 20191695

GH09E020190



8020198001 20198799

GH09E020198



8120200743 20201612

GH09E020200



8220201883 20201932

GH09E020201



8320209201 20210347

GH09E020209



8420215263 20215480

GH09E020215



8520219603 20219752

GH09E020219



8620224814 20225092

GH09E020224



8720225802 20226199

GH09E020225



8820235889 20237743

GH09E020235



8920241802 20245199

GH09E020241



9020265939 20265967 - GC09M020265




9120270378 20270475

GH09E020270



9220289394 20290764

GH09E020289



9320297303 20298239

GH09E020297



9420301674 20304752

GH09E020301



9520307823 20307972

GH09E020307



9620314869 20316477

GH09E020314



9720318933 20322360

GH09E020318



9820330165 20332555 - GC09M020330




9920331408 20332377 + SMNP
Exon structure


64939 ENSG00000237434
10020331446 20332277 + GC09P020332




10120341665 20622543 - MLLT3
Exon structure

Hs.591085 4300 ENSG00000171843 MLLT3, super elongation complex subunit
10220353201 20357599

GH09E020353



10320358185 20358800

GH09E020358



10420373111 20374012

GH09E020373



10520376272 20377486

GH09E020376



10620382334 20383199

GH09E020382



10720395001 20395201

GH09E020395



10820398703 20398852

GH09E020398



10920408141 20409189

GH09E020408



11020411148 20411238 - MIR4473
Exon structure


100616229 ENSG00000263790 microRNA 4473
11120418321 20418427 + RNU4-26P
Exon structure


106479569 ENSG00000222202 RNA, U4 small nuclear 26, pseudogene
11220441749 20443572

GH09E020441



11320477001 20477200

GH09E020477



11420478001 20479001

GH09E020478



11520502265 20502342 - MIR4474
Exon structure


100616441 ENSG00000264941 microRNA 4474
11620505043 20505172

GH09E020505



11720506601 20506800

GH09E020506



11820507002 20508600

GH09E020507



11920509006 20510344

GH09E020509



12020511701 20513800

GH09E020511



12120515001 20515600

GH09E020515



12220524863 20524992

GH09E020524



12320532400 20532532

GH09E020532



12420532526 20533398 + RPL7AP48
Exon structure


100271212 ENSG00000237088 ribosomal protein L7a pseudogene 48
12520550801 20552600

GH09E020550



12620553002 20554380

GH09E020553



12720557904 20559799

GH09E020557



12820568972 20571399

GH09E020568



12920579801 20580000

GH09E020579



13020592762 20592971

GH09E020592



13120592998 20593932

GH09E020593



13220599001 20599201

GH09E020599



13320599262 20599531

GH09E020600



13420601401 20602199

GH09E020601



13520603801 20605400

GH09E020603



13620606601 20606800

GH09E020606



13720610510 20612618

GH09E020610



13820618382 20618551

GH09E020618



13920618612 20618911

GH09E020620



14020619752 20624299

GH09E020619



14120624882 20625051

GH09E020624



14220634362 20634511

GH09E020634



14320640042 20641221

GH09E020640



14420658309 20995955 + FOCAD
Exon structure

Hs.136247 54914 ENSG00000188352 focadhesin
14520658322 20659247

GH09E020658



14620662201 20662600

GH09E020662



14720678462 20679561

GH09E020678



14820682920 20686304

GH09E020682



14920683302 20684750 - FOCAD-AS1
Exon structure


101929548 ENSG00000227071 FOCAD antisense RNA 1
15020692401 20693401

GH09E020692



15120700801 20701400

GH09E020700



15220716104 20716188 + GC09P020716




15320716105 20716188 + MIR491
Exon structure


574444 ENSG00000207609 microRNA 491
15420731373 20733310

GH09E020731



15520759800 20760955

GH09E020759



15620784778 20784886

GH09E020784



15720786926 20787055 + GC09P020786




15820786927 20787055 + ENSG00000202189
Exon structure



ENSG00000202189
15920821675 20822014

GH09E020821



16020825146 20826062

GH09E020825



16120835393 20836364

GH09E020835



16220853958 20854051

GH09E020853



16320854602 20854751

GH09E020854



16420872202 20873799

GH09E020872



16520941001 20941351

GH09E020941



16620945442 20945591

GH09E020945



16720962310 20963422

GH09E020962



16820973232 20975098

GH09E020973



16920980533 20982439

GH09E020980



17020984800 20985000

GH09E020984



17120989853 20991294

GH09E020989



17220996401 20997000

GH09E020996



17320997201 20998400

GH09E020997



17420999515 21031670 - HACD4
Exon structure

Hs.716678 401494 ENSG00000188921 3-hydroxyacyl-CoA dehydratase 4
17521001307 21003155

GH09E021001



17621016784 21016803

GH09E021016



17721017202 21017371

GH09E021017



17821023401 21024800

GH09E021023



17921028401 21028801

GH09E021028



18021030020 21032266

GH09E021030



18121030488 21054169 + LOC105375989
Exon structure


105375989

18221047601 21047800

GH09E021047



18321050681 21050716 + PIR56523
Exon structure





18421058771 21059323 - IFNNP1
Exon structure


654783 ENSG00000230208 interferon nu 1, pseudogene
18521060801 21061601

GH09E021060



18621069503 21070811

GH09E021069



18721077105 21077963 - IFNB1
Exon structure

Hs.93177 3456 ENSG00000171855 interferon beta 1
18821081402 21082599

GH09E021081



18921094435 21098071

GH09E021094



19021104402 21105300

GH09E021104



19121106543 21106836 + IFNWP4
Exon structure


hugo57 ENSG00000225027 interferon omega 1 pseudogene 4
19221106543 21106836 + GC09P021108




19321111042 21111191

GH09E021111



19421118965 21120150

GH09E021118



19521135598 21136350 - ENSG00000275980
Exon structure



ENSG00000275980
19621140214 21142145 - IFNW1
Exon structure

Hs.73010 3467 ENSG00000177047 interferon omega 1
19721144601 21145200

GH09E021144



19821153401 21154599

GH09E021153



19921160002 21160999

GH09E021160



20021160235 21160336 - ENSG00000199635
Exon structure



ENSG00000199635
20121160236 21160336 - GC09M021161




20221165637 21166660 - IFNA21
Exon structure

Hs.113211 3452 ENSG00000137080 interferon alpha 21
20321178510 21179598 - IFNWP15
Exon structure


100130866 ENSG00000232281 interferon omega 1 pseudogene 15
20421178589 21179188 - GC09M021274




20521183063 21183800

GH09E021183



20621186618 21187671 - IFNA4
Exon structure

Hs.1510 3441 ENSG00000236637 interferon alpha 4
20721190146 21191244 - IFNWP9
Exon structure


100130671 ENSG00000226597 interferon omega 1 pseudogene 9
20821195155 21196000

GH09E021195



20921201469 21202205 - IFNA7
Exon structure

Hs.282274 3444 ENSG00000214042 interferon alpha 7
21021206181 21207143 - IFNA10
Exon structure

Hs.282275 3446 ENSG00000186803 interferon alpha 10
21121209189 21209899 - IFNWP18
Exon structure


360001 ENSG00000223684 interferon omega 1 pseudogene 18
21221213747 21214400

GH09E021213



21321216373 21217311 - IFNA16
Exon structure

Hs.56303 3449 ENSG00000147885 interferon alpha 16
21421226373 21231405 + GC09P021226




21521227243 21228222 - IFNA17
Exon structure

Hs.282276 3451 ENSG00000234829 interferon alpha 17
21621230821 21231853 - IFNWP5
Exon structure


392292 ENSG00000232138 interferon omega 1 pseudogene 5
21721235749 21236400

GH09E021235



21821239002 21239991 - IFNA14
Exon structure

Hs.93907 3448 ENSG00000228083 interferon alpha 14
21921252802 21253604

GH09E021252



22021268001 21268400

GH09E021268



22121277688 21278619 - IFNA22P
Exon structure

Hs.545842; Hs.742632 3453 ENSG00000224416 interferon alpha 22, pseudogene
22221286646 21287600

GH09E021286



22321294400 21294601

GH09E021294



22421295001 21295799

GH09E021295



22521296201 21296400

GH09E021296



22621304326 21305313 - IFNA5
Exon structure

Hs.37113 3442 ENSG00000147873 interferon alpha 5
22721321300 21321827 + IFNA20P
Exon structure


3463 ENSG00000226393 interferon alpha 20, pseudogene
22821326662 21326811

GH09E021326



22921329671 21335430 - KLHL9
Exon structure

Hs.744736; Hs.710126; Hs.701778 55958 ENSG00000198642 kelch like family member 9
23021333922 21334071

GH09E021333



23121334164 21336011

GH09E021334



23221349835 21351378 - IFNA6
Exon structure

Hs.533470 3443 ENSG00000120235 interferon alpha 6
23321357110 21358599

GH09E021357



23421367372 21368962 - IFNA13
Exon structure

Hs.533471 3447 ENSG00000233816 interferon alpha 13
23521372788 21372828

GH09E021372



23621381401 21382531

GH09E021381



23721384254 21385397 - IFNA2
Exon structure

Hs.211575 3440 ENSG00000188379 interferon alpha 2
23821385201 21385400

GH09E021385



23921388343 21388354

GH09E021388



24021394888 21396346 - ENSG00000261696
Exon structure



ENSG00000261696
24121396022 21396191

GH09E021398



24221396242 21396411

GH09E021397



24321396442 21396499

GH09E021396



24421398614 21399139 - IFNA11P
Exon structure


3461 ENSG00000231195 interferon alpha 11, pseudogene
24521403081 21403651 + IFNA12P
Exon structure


158011 ENSG00000235108 interferon alpha 12, pseudogene
24621409147 21410185 + IFNA8
Exon structure

Hs.73890 3445 ENSG00000120242 interferon alpha 8
24721409169 21441316 + IFNA1
Exon structure

Hs.37026 3439 ENSG00000197919 interferon alpha 1
24821413601 21414085

GH09E021413



24921420234 21420813 + IFNWP2
Exon structure


646581 ENSG00000237691 interferon omega 1 pseudogene 2
25021432601 21433000

GH09E021432



25121443602 21445000

GH09E021443



25221450884 21452280

GH09E021450



25321454268 21559698 - MIR31HG
Exon structure

Hs.458096 554202 ENSG00000171889 MIR31 host gene
25421455439 21456068 + IFNWP19
Exon structure


3474 ENSG00000238271 interferon omega 1 pseudogene 19
25521455484 21456049 + GC09P021456




25621466042 21466191

GH09E021466



25721480839 21482313 - IFNE
Exon structure

Hs.682604 338376 ENSG00000184995 interferon epsilon
25821481201 21482110

GH09E021481



25921490002 21490399

GH09E021490



26021500042 21500151

GH09E021500



26121503954 21508220

GH09E021503



26221512091 21512290 + GC09P021512




26321512115 21512185 - MIR31
Exon structure


407035 ENSG00000199177 microRNA 31
26421513582 21513731

GH09E021513



26521520142 21520291

GH09E021520



26621521022 21521171

GH09E021522



26721521582 21521711

GH09E021521



26821523202 21523291

GH09E021523



26921524306 21524385 - GC09M021524




27021524307 21524382 - ENSG00000264379
Exon structure



ENSG00000264379
27121542609 21544118

GH09E021542



27221547201 21547400

GH09E021548



27321547672 21562295

GH09E021547



27421562617 21573541

GH09E021562



27521573873 21593957

GH09E021573



27621595660 21595810

GH09E021595



27721605356 21606331

GH09E021605



27821610595 21612820

GH09E021610



27921614267 21617456

GH09E021614



28021634321 21635501

GH09E021634



28121638285 21638676 + ENSG00000227443
Exon structure



ENSG00000227443
28221653395 21653678

GH09E021653



28321656573 21658598

GH09E021656



28421672882 21673031

GH09E021672



28521674146 21691044

GH09E021674



28621695174 21700073 + KHSRPP1
Exon structure


402359 ENSG00000229835 KH-type splicing regulatory protein pseudogene 1
28721695811 21696233

GH09E021695



28821696522 21696699

GH09E021696



28921696702 21697114

GH09E021697



29021699314 21699596 + RN7SL151P
Exon structure


107075319 ENSG00000244230 RNA, 7SL, cytoplasmic 151, pseudogene
29121699321 21699394

GH09E021699



29221702720 21702757

GH09E021702



29321707922 21709554

GH09E021707



29421709582 21709771

GH09E021709



29521710251 21712238

GH09E021710



29621728605 21729290

GH09E021728



29721744906 21745182

GH09E021744



29821746458 21748145

GH09E021746



29921770654 21772020

GH09E021770



30021777002 21779799

GH09E021777



30121781301 21783420

GH09E021781



30221787737 21790318

GH09E021787



30321796684 21797384

GH09E021796



30421801123 21804421

GH09E021801



30521802543 21937651 + MTAP
Exon structure

Hs.193268 4507 ENSG00000099810 methylthioadenosine phosphorylase
30621802636 22032986 + ENSG00000264545
Exon structure



ENSG00000264545
30721809707 21814482

GH09E021809



30821810652 21810678 + PIR60166
Exon structure





30921811621 21812347 - TUBB8P1
Exon structure


100418937 ENSG00000229298 tubulin beta 8 class VIII pseudogene 1
31021817236 21817451

GH09E021817



31121830168 21838154

GH09E021830



31221852423 21857533

GH09E021852



31321858910 21861926 - ENSG00000265194
Exon structure



ENSG00000265194
31421863782 21863931

GH09E021863



31521872822 21874706

GH09E021872



31621892188 21893857 + ENSG00000279670
Exon structure



ENSG00000279670
31721896733 21906907 - GC09M021896




31821901396 21901429

GH09E021901



31921919145 21920617

GH09E021919



32021929455 21931073 + ERVFRD-3
Exon structure


100533725 ENSG00000264801 endogenous retrovirus group FRD member 3
32121933382 21933531

GH09E021933



32221933801 21934400

GH09E021934



32321934040 21934068 + PIR35648
Exon structure





32421964819 21966035

GH09E021964



32521966929 21967754 + CDKN2A-AS1
Exon structure

Hs.721053 51198 ENSG00000224854 CDKN2A antisense RNA 1 (head to head)
32621967702 21967751

GH09E021967



32721967752 21995301 - CDKN2A
Exon structure

Hs.512599 1029 ENSG00000147889 cyclin dependent kinase inhibitor 2A
32821974247 21975683

GH09E021974



32921976232 21976264 - PIR47863
Exon structure





33021976232 21976264 - GC09M021977




33121983001 21983200

GH09E021984



33221983401 21983600

GH09E021983



33321983801 21984000

GH09E021987



33421984232 21984382

GH09E021985



33521986409 21989200

GH09E021986



33621989401 21992000

GH09E021989



33721992805 21996531

GH09E021992



33821994778 22121097 + CDKN2B-AS1
Exon structure

Hs.493614 100048912 ENSG00000240498 CDKN2B antisense RNA 1
33921995482 21996013 + ENSG00000266446
Exon structure



ENSG00000266446
34021996543 21996791

GH09E021996



34122002903 22009363 - CDKN2B
Exon structure

Hs.72901 1030 ENSG00000147883 cyclin dependent kinase inhibitor 2B
34222005325 22006471

GH09E022005



34322007826 22010135

GH09E022007



34422011950 22012538 + UBA52P6
Exon structure


100130239 ENSG00000215221 ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 6
34522012525 22012847

GH09E022012



34622026828 22027086

GH09E022026



34722029402 22030971

GH09E022029



34822035600 22035801

GH09E022035



34922036585 22038600

GH09E022036



35022038826 22039181

GH09E022038



35122039201 22042903

GH09E022039



35222044600 22044891

GH09E022044



35322046758 22046901 + ENSG00000274055
Exon structure



ENSG00000274055
35422049400 22049601

GH09E022049



35522050402 22053690

GH09E022050



35622078886 22082106

GH09E022078



35722083311 22086381

GH09E022083



35822087553 22089799

GH09E022087



35922096341 22099440

GH09E022096



36022101775 22106088

GH09E022101



36122106687 22109801

GH09E022106



36222111188 22112547

GH09E022111



36322112782 22112814

GH09E022112



36422113114 22113754

GH09E022113



36522115082 22115231

GH09E022115



36622116508 22119801

GH09E022116



36722117665 22117814 + ENSG00000277653
Exon structure



ENSG00000277653
36822124087 22125290

GH09E022124



36922127678 22130815

GH09E022127



37022135579 22137943

GH09E022135



37122142000 22143001

GH09E022142



37222144214 22144969

GH09E022144



37322147093 22149648

GH09E022147



37422156467 22160599

GH09E022156



37522165001 22165800

GH09E022165



37622168881 22171999

GH09E022168



37722195135 22207552 - GC09M022195




37822203601 22204200

GH09E022203



37922203990 22214672 - ENSG00000236921
Exon structure



ENSG00000236921
38022208554 22213035

GH09E022208



38122214398 22215416

GH09E022214



38222216409 22217852

GH09E022216



38322237248 22241999

GH09E022237



38422244712 22245200

GH09E022244



38522256030 22258946

GH09E022256



38622287753 22338258 - GC09M022287




38722342658 22343398

GH09E022342



38822388862 22390339

GH09E022388



38922395982 22396131

GH09E022395



39022408638 22408663

GH09E022408



39122414050 22414274

GH09E022414



39222416447 22416971

GH09E022416



39322446182 22448366

GH09E022446



39422446841 22455740 + DMRTA1
Exon structure

Hs.371976 63951 ENSG00000176399 DMRT like family A1
39522468826 22468906

GH09E022468



39622482962 22483351

GH09E022482



39722496449 22496475 + PIR58903
Exon structure





39822550629 22551629 - GC09M022550




39922555179 22555554 + GC09P022555




40022626727 22639114 + GC09P022626




40122646200 22824213 + LINC01239
Exon structure


441389 ENSG00000234840 long intergenic non-protein coding RNA 1239
40222683182 22683371

GH09E022684



40322683802 22683931

GH09E022683



40422747692 22748234 + CLIC4P1
Exon structure


646609 ENSG00000236739 chloride intracellular channel 4 pseudogene 1
40522767175 22768316 + ENSG00000224549
Exon structure



ENSG00000224549
40622792838 22793127

GH09E022792



40722917085 22934992 - LOC105375990
Exon structure


105375990

40822969142 22970009

GH09E022969



40923001182 23001293

GH09E023001



41023004731 23005790

GH09E023004



41123021792 23024226 + GC09P023021




41223088953 23089679

GH09E023088



41323117722 23117871

GH09E023117



41423135571 23138228 + GC09P023135




41523228083 23228232

GH09E023228



41623230123 23230332

GH09E023230



41723328659 23328685 + PIR39728
Exon structure





41823342469 23343032

GH09E023342