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Display genomic neighborhood for:

gene
enhancer
genomic coordinates

   GeneLoc map region for Chromosome 13 (54,214,373 - 58,216,942 bp) around "SPATA2P1"


GenesEnhancers
#
#
 Location
Location
 Strand
Strand
Gene
Gene
 Enhancer ID
Enhancer ID
 Unigene cluster
Unigene cluster
 Entrez Gene Id
Entrez Gene Id
Ensembl Id
Ensembl Id
 Description
Description
1chr13: 54,226,966-54,227,115

GH13J054226



2chr13: 54,263,715-54,264,706

GH13J054263



3chr13: 54,265,003-54,265,483

GH13J054265



4chr13: 54,266,600-54,268,249

GH13J054266



5chr13: 54,268,406-54,269,387

GH13J054268



6chr13: 54,270,651-54,272,789

GH13J054270



7chr13: 54,272,933-54,274,079

GH13J054272



8chr13: 54,301,206-54,301,355

GH13J054302



9chr13: 54,301,402-54,301,846

GH13J054301



10chr13: 54,311,972-54,312,048 - MIR1297
Exon structure

100302187 ENSG00000283126 microRNA 1297
11chr13: 54,355,147-54,358,349

GH13J054355



12chr13: 54,394,183-54,395,318

GH13J054394



13chr13: 54,440,678-54,441,337 - RPL13AP25
Exon structure

100287887 ENSG00000136149 ribosomal protein L13a pseudogene 25
14chr13: 54,634,442-54,634,774

GH13J054634



15chr13: 54,637,466-54,637,615

GH13J054637



16chr13: 54,690,839-54,697,881 + GC13P054691




17chr13: 54,800,172-54,841,989 + LOC105370213
Exon structure

105370213

18chr13: 54,899,849-54,906,129 + GC13P054899




19chr13: 54,918,657-54,929,396 + GC13P054918




20chr13: 54,930,469-54,938,913 - GC13M054930




21chr13: 54,940,843-54,986,719 + ENSG00000277047
Exon structure


ENSG00000277047
22chr13: 54,941,338-54,941,425

GH13J054941



23chr13: 54,944,262-54,945,991

GH13J054944



24chr13: 54,946,086-54,946,335

GH13J054946



25chr13: 54,976,551-54,977,652 - GC13M054976




26chr13: 54,988,729-54,989,623 - GC13M054988




27chr13: 54,999,197-55,000,775

GH13J054999



28chr13: 55,000,817-55,002,709

GH13J055000



29chr13: 55,013,213-55,014,649

GH13J055013



30chr13: 55,046,703-55,047,232 - GC13M055046




31chr13: 55,051,714-55,051,741 + PIR52645
Exon structure




32chr13: 55,062,945-55,161,490 + LINC02335
Exon structure

107984565 ENSG00000278630 long intergenic non-protein coding RNA 2335
33chr13: 55,076,863-55,081,784 + GC13P055076




34chr13: 55,086,822-55,087,375

GH13J055086



35chr13: 55,128,285-55,128,444 + ENSG00000275071
Exon structure


ENSG00000275071
36chr13: 55,174,454-55,174,548 + MIR5007
Exon structure

100846996 ENSG00000264387 microRNA 5007
37chr13: 55,229,687-55,230,549

GH13J055229



38chr13: 55,230,606-55,230,755

GH13J055230



39chr13: 55,245,106-55,245,275

GH13J055245



40chr13: 55,245,386-55,245,406

GH13J055246



41chr13: 55,245,426-55,245,575

GH13J055247



42chr13: 55,320,835-55,321,853 + GC13P055320




43chr13: 55,362,034-55,362,333

GH13J055362



44chr13: 55,384,622-55,384,763

GH13J055384



45chr13: 55,388,461-55,390,620 + GC13P055388




46chr13: 55,432,565-55,439,173 + GC13P055432




47chr13: 55,436,838-55,437,645

GH13J055436



48chr13: 55,454,551-55,464,932 - GC13M055454




49chr13: 55,510,725-55,511,310 - GC13M055511




50chr13: 55,535,697-55,583,524 - ENSG00000274090
Exon structure


ENSG00000274090
51chr13: 55,563,986-55,564,675

GH13J055563



52chr13: 55,571,386-55,571,535

GH13J055572



53chr13: 55,571,646-55,571,795

GH13J055571



54chr13: 55,574,905-55,575,520

GH13J055574



55chr13: 55,575,953-55,578,316

GH13J055575



56chr13: 55,578,346-55,578,348

GH13J055578



57chr13: 55,583,566-55,584,557

GH13J055583



58chr13: 55,652,206-55,655,029

GH13J055652



59chr13: 55,654,619-55,659,848 + GC13P055654




60chr13: 55,655,801-55,656,000

GH13J055655



61chr13: 55,659,472-55,661,825

GH13J055659



62chr13: 55,663,874-55,664,515

GH13J055663



63chr13: 55,673,908-55,674,350

GH13J055673



64chr13: 55,817,890-55,863,425 + GC13P055817




65chr13: 55,822,524-55,823,066 + GC13P055822




66chr13: 55,822,524-55,823,066 + GC13P055823




67chr13: 55,863,838-55,863,866 + PIR47898
Exon structure




68chr13: 55,930,672-55,932,978 - GC13M055930




69chr13: 55,996,489-56,000,450 - HNF4GP1
Exon structure

100130462 ENSG00000228611 hepatocyte nuclear factor 4 gamma pseudogene 1
70chr13: 55,999,200-56,000,448 - GC13M055999




71chr13: 56,051,610-56,053,000 + GC13P056051




72chr13: 56,112,647-56,112,796

GH13J056112



73chr13: 56,166,445-56,167,723

GH13J056166



74chr13: 56,214,373-56,216,942 + SPATA2P1
Exon structure

100873966 ENSG00000228319 spermatogenesis associated 2 pseudogene 1
75chr13: 56,233,678-56,325,313 - GC13M056233




76chr13: 56,258,461-56,735,485 - LOC105370214
Exon structure

105370214

77chr13: 56,271,741-56,271,893

GH13J056271



78chr13: 56,291,346-56,291,372 - PIR56223
Exon structure




79chr13: 56,392,931-56,392,960 + GC13P056392




80chr13: 56,424,347-56,424,496

GH13J056424



81chr13: 56,480,836-56,482,020 - GC13M056480




82chr13: 56,582,034-56,601,508 - GC13M056582




83chr13: 56,603,108-56,612,045 - GC13M056603




84chr13: 56,846,710-56,849,599 - GC13M056846




85chr13: 56,885,279-56,885,602 - GC13M056886




86chr13: 56,885,284-56,885,602 - RN7SKP6
Exon structure

100873850 ENSG00000201665 RNA, 7SK small nuclear pseudogene 6
87chr13: 57,045,913-57,046,611

GH13J057045



88chr13: 57,053,254-57,070,236 + GC13P057053




89chr13: 57,123,360-57,124,418

GH13J057123



90chr13: 57,137,687-57,137,836

GH13J057137



91chr13: 57,140,918-57,143,939 + PRR20A
Exon structure
Hs.525056 122183 ENSG00000204919 proline rich 20A
92chr13: 57,140,918-57,157,082 + PRR20C
Exon structure

729240 ENSG00000229665 proline rich 20C
93chr13: 57,147,488-57,150,509 + PRR20B
Exon structure
Hs.723090 729233 ENSG00000204918 proline rich 20B
94chr13: 57,160,632-57,163,653 + PRR20D
Exon structure

729246 ENSG00000227151 proline rich 20D
95chr13: 57,167,178-57,167,237

GH13J057167



96chr13: 57,167,197-57,170,218 + PRR20E
Exon structure

729250 ENSG00000234278 proline rich 20E
97chr13: 57,173,453-57,173,632 + PRR20FP
Exon structure

106480416 ENSG00000271140 proline rich 20F, pseudogene
98chr13: 57,200,433-57,202,199 + GC13P057200




99chr13: 57,204,379-57,204,804 + MTCO2P3
Exon structure

100873203 ENSG00000230009 mitochondrially encoded cytochrome c oxidase II pseudogene 3
100chr13: 57,213,047-57,216,730 - LOC105370216
Exon structure

105370216

101chr13: 57,314,665-57,316,417 + SLC25A5P4
Exon structure

100131027 ENSG00000234421 solute carrier family 25 member 5 pseudogene 4
102chr13: 57,315,287-57,315,396

GH13J057315



103chr13: 57,375,703-57,375,734 + GC13P057375




104chr13: 57,391,165-57,391,518 - RPL31P53
Exon structure

100271477 ENSG00000225352 ribosomal protein L31 pseudogene 53
105chr13: 57,457,461-57,520,231 - LOC105370217
Exon structure

105370217

106chr13: 57,492,466-57,492,818

GH13J057492



107chr13: 57,527,387-57,527,476

GH13J057527



108chr13: 57,582,087-57,582,236

GH13J057582



109chr13: 57,629,467-57,633,944

GH13J057629



110chr13: 57,630,104-57,729,311 + PCDH17
Exon structure
Hs.106511 27253 ENSG00000118946 protocadherin 17
111chr13: 57,632,759-57,633,575 - ENSG00000278722
Exon structure


ENSG00000278722
112chr13: 57,636,745-57,638,939

GH13J057636



113chr13: 57,640,102-57,641,383

GH13J057640



114chr13: 57,643,304-57,645,288

GH13J057643



115chr13: 57,655,439-57,656,848

GH13J057655



116chr13: 57,661,231-57,662,331

GH13J057661



117chr13: 57,662,550-57,664,469

GH13J057662



118chr13: 57,666,245-57,666,589

GH13J057666



119chr13: 57,672,708-57,673,294 - GC13M057672




120chr13: 57,672,827-57,673,510

GH13J057672



121chr13: 57,726,180-57,726,379

GH13J057726



122chr13: 57,739,874-57,740,706 + GC13P057739




123chr13: 57,773,552-57,773,839 + GC13P057773




124chr13: 57,865,211-57,866,259

GH13J057865



125chr13: 57,869,340-57,871,505 + GC13P057869




126chr13: 57,884,416-57,884,487 - TRE-CTC4-1
Exon structure

100189506
transfer RNA-Glu (CTC) 4-1
127chr13: 57,892,348-57,912,169 + GC13P057892




128chr13: 57,903,095-57,903,123 + GC13P057903




129chr13: 57,974,268-57,978,761 - GC13M057974




130chr13: 57,981,794-57,984,719 + GC13P057981




131chr13: 57,991,349-57,991,464 + GC13P057993




132chr13: 57,991,350-57,991,464 + RNA5SP30
Exon structure

100873362 ENSG00000202422 RNA, 5S ribosomal pseudogene 30
133chr13: 58,012,390-58,018,201 + GC13P058012




134chr13: 58,050,736-58,052,328

GH13J058050



135chr13: 58,056,234-58,057,189

GH13J058056



136chr13: 58,165,827-58,209,483 + LINC02338
Exon structure

101926897 ENSG00000277448 long intergenic non-protein coding RNA 2338