GeneTide V1.3

an academic website of the

in association with

Home

Overview

Multiple Query

EGC List

Sources

Publications

GeneTide Team

What's New

Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5

Contact us

GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
de-novo genes. (More about GeneTide.)

Search GeneTide

Gene Association Results Summary for M87867

GC Gene	GC ID	UniGene	DoTS	AceView	GeneAnnot	BGL	Co	Uq	Score	Rank
TRDC	GC14P022001	-	-	+	-	+	0.40	0.02	0.28	1
TRDJ4	GC14P021994	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ40	GC14P022038	-	-	+	-	+	0.40	0.02	0.28	1
TRAV26-1	GC14P021661	-	-	+	-	+	0.40	0.02	0.28	1
TRAV20	GC14P021578	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ50	GC14P022027	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ42	GC14P022036	-	-	+	-	+	0.40	0.02	0.28	1
TRDJ1	GC14P021988	-	-	+	-	+	0.40	0.02	0.28	1
TRAV38-2DV8	GC14P021818	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ54	GC14P022022	-	-	+	-	+	0.40	0.02	0.28	1
TRDV2	GC14P021182	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ53	GC14P022023	-	-	+	-	+	0.40	0.02	0.28	1
TRAV23DV6	GC14P021624	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ39	GC14P022040	-	-	+	-	+	0.40	0.02	0.28	1
TRDJ2	GC14P021995	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ52	GC14P022025	-	-	+	-	+	0.40	0.02	0.28	1
TRDJ3	GC14P021997	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ41	GC14P022037	-	-	+	-	+	0.40	0.02	0.28	1
TRAV38-1	GC14P021809	-	-	+	-	+	0.40	0.02	0.28	1
TRAV29DV5	GC14P021701	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ57	GC14P022019	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ38	GC14P022041	-	-	+	-	+	0.40	0.02	0.28	1
TRAV26-2	GC14P021740	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ48	GC14P022029	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ45	GC14P022033	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ44	GC14P022034	-	-	+	-	+	0.40	0.02	0.28	1
TRAV27	GC14P021685	-	-	+	-	+	0.40	0.02	0.28	1
TRDV1	GC14P021634	-	-	+	-	+	0.40	0.02	0.28	1
TRAJ55	GC14P022021	-	-	-	-	+	0.20	0.01	0.14	2
TRAV21	GC14P021590	-	-	-	-	+	0.20	0.01	0.14	2
TRAV33	GC14P021727	-	-	-	-	+	0.20	0.01	0.14	2
TRDD2	GC14P021978	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ58	GC14P022018	-	-	-	-	+	0.20	0.01	0.14	2
TRAV28	GC14P021692	-	-	-	-	+	0.20	0.01	0.14	2
TRAV8-7	GC14P021670	-	-	-	-	+	0.20	0.01	0.14	2
TRAV30	GC14P021706	-	-	-	-	+	0.20	0.01	0.14	2
TRAV35	GC14P021759	-	-	-	-	+	0.20	0.01	0.14	2
TRAV39	GC14P021841	-	-	-	-	+	0.20	0.01	0.14	2
TRAV34	GC14P021745	-	-	-	-	+	0.20	0.01	0.14	2
TRAV24	GC14P021643	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ51	GC14P022026	-	-	-	-	+	0.20	0.01	0.14	2
TRDD1	GC14P021979	-	-	-	-	+	0.20	0.01	0.14	2
ENSG00000166056	GC14P021635	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ61	GC14P022014	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ43	GC14P022035	-	-	-	-	+	0.20	0.01	0.14	2
TRAV25	GC14P021650	-	-	-	-	+	0.20	0.01	0.14	2
TRAV37	GC14P021803	-	-	-	-	+	0.20	0.01	0.14	2
TRA@	GC14P021160	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ47	GC14P022031	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ46	GC14P022032	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ60	GC14P022016	-	-	-	-	+	0.20	0.01	0.14	2
TRAV22	GC14P021608	-	-	-	-	+	0.20	0.01	0.14	2
TRDD3	GC14P021987	-	-	-	-	+	0.20	0.01	0.14	2
TRAV32	GC14P021723	-	-	-	-	+	0.20	0.01	0.14	2
TRAV36DV7	GC14P021764	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ59	GC14P022017	-	-	-	-	+	0.20	0.01	0.14	2
TRAV31	GC14P021715	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ49	GC14P022028	-	-	-	-	+	0.20	0.01	0.14	2
TRAV41	GC14P021858	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ37	GC14P022042	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ56	GC14P022020	-	-	-	-	+	0.20	0.01	0.14	2
TRAV40	GC14P021852	-	-	-	-	+	0.20	0.01	0.14	2
TRD@	GC14P021963	-	-	-	-	+	0.20	0.01	0.14	2
TRAJ6	GC14P022079	-	-	+	-	-	0.20	0.01	0.14	3
TRAV1-2	GC14P021181	-	-	+	-	-	0.20	0.01	0.14	3
TRAV12-1	GC14P021379	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ12	GC14P022072	-	-	+	-	-	0.20	0.01	0.14	3
TRAV10	GC14P021363	-	-	+	-	-	0.20	0.01	0.14	3
TRAV4	GC14P021274	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ24	GC14P022059	-	-	+	-	-	0.20	0.01	0.14	3
TRAV5	GC14P021287	-	-	+	-	-	0.20	0.01	0.14	3
TRAV19	GC14P021545	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ9	GC14P022076	-	-	+	-	-	0.20	0.01	0.14	3
TRAV13-2	GC14P021456	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ8	GC14P022077	-	-	+	-	-	0.20	0.01	0.14	3
TRAV3	GC14P021261	-	-	+	-	-	0.20	0.01	0.14	3
TRAC	GC14P022086	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ3	GC14P022082	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ15	GC14P022068	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ32	GC14P022049	-	-	+	-	-	0.20	0.01	0.14	3
TRAV8-4	GC14P021432	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ11	GC14P022073	-	-	+	-	-	0.20	0.01	0.14	3
TRAV14DV4	GC14P021462	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ17	GC14P022066	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ33	GC14P022048	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ29	GC14P022052	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ23	GC14P022060	-	-	+	-	-	0.20	0.01	0.14	3
TRAV13-1	GC14P021406	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ27	GC14P022055	-	-	+	-	-	0.20	0.01	0.14	3
TRAV12-3	GC14P021503	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ13	GC14P022070	-	-	+	-	-	0.20	0.01	0.14	3
TRAV8-2	GC14P021384	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ34	GC14P022046	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ21	GC14P022062	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ10	GC14P022075	-	-	+	-	-	0.20	0.01	0.14	3
TRAV18	GC14P021541	-	-	+	-	-	0.20	0.01	0.14	3
TRAV17	GC14P021535	-	-	+	-	-	0.20	0.01	0.14	3
TRAV9-2	GC14P021479	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ20	GC14P022063	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ18	GC14P022065	-	-	+	-	-	0.20	0.01	0.14	3
TRAJ4	GC14P022081	-	-	+	-	-	0.20	0.01	0.14	3

GeneTide Query Results for the mRNA M87867

General links

Similar transcripts	FASTA	UCSC Genome Browser

Validation Level

Validated by

RepeatMasker

Validation Score

UniGene	DoTS	AceView
+	+	+

---

4 - Very High

Resources Annotation

Resource

Data

UniGene

unigene_id	locuslink_id	gc_id	gene_symbol
Hs.508884

DoTs

dots_id	locuslink_id	gc_id	gene_symbol
DT.95150815

AceView

av_symbol	locuslink_id	gc_id	gene_symbol
TRDandTRA_	28755	GC14P022086	TRAC
TRDandTRA_	28752	GC14P022082	TRAJ3
TRDandTRA_	28751	GC14P022081	TRAJ4
TRDandTRA_	28749	GC14P022079	TRAJ6
TRDandTRA_	28747	GC14P022077	TRAJ8
TRDandTRA_	28746	GC14P022076	TRAJ9
TRDandTRA_	28745	GC14P022075	TRAJ10
TRDandTRA_	28744	GC14P022073	TRAJ11
TRDandTRA_	28743	GC14P022072	TRAJ12
TRDandTRA_	28742	GC14P022070	TRAJ13
TRDandTRA_	28740	GC14P022068	TRAJ15
TRDandTRA_	28738	GC14P022066	TRAJ17
TRDandTRA_	28737	GC14P022065	TRAJ18
TRDandTRA_	28735	GC14P022063	TRAJ20
TRDandTRA_	28734	GC14P022062	TRAJ21
TRDandTRA_	28732	GC14P022060	TRAJ23
TRDandTRA_	28731	GC14P022059	TRAJ24
TRDandTRA_	28728	GC14P022055	TRAJ27
TRDandTRA_	28726	GC14P022052	TRAJ29
TRDandTRA_	28723	GC14P022049	TRAJ32
TRDandTRA_	28722	GC14P022048	TRAJ33
TRDandTRA_	28721	GC14P022046	TRAJ34
TRDandTRA_	28717	GC14P022041	TRAJ38
TRDandTRA_	28716	GC14P022040	TRAJ39
TRDandTRA_	28715	GC14P022038	TRAJ40
TRDandTRA_	28714	GC14P022037	TRAJ41
TRDandTRA_	28713	GC14P022036	TRAJ42
TRDandTRA_	28711	GC14P022034	TRAJ44
TRDandTRA_	28710	GC14P022033	TRAJ45
TRDandTRA_	28707	GC14P022029	TRAJ48
TRDandTRA_	28705	GC14P022027	TRAJ50
TRDandTRA_	28703	GC14P022025	TRAJ52
TRDandTRA_	28702	GC14P022023	TRAJ53
TRDandTRA_	28701	GC14P022022	TRAJ54
TRDandTRA_	28698	GC14P022019	TRAJ57
TRDandTRA_	28692	GC14P021181	TRAV1-2
TRDandTRA_	28690	GC14P021261	TRAV3
TRDandTRA_	28689	GC14P021274	TRAV4
TRDandTRA_	28688	GC14P021287	TRAV5
TRDandTRA_	28684	GC14P021384	TRAV8-2
TRDandTRA_	28682	GC14P021432	TRAV8-4
TRDandTRA_	28677	GC14P021479	TRAV9-2
TRDandTRA_	28676	GC14P021363	TRAV10
TRDandTRA_	28674	GC14P021379	TRAV12-1
TRDandTRA_	28672	GC14P021503	TRAV12-3
TRDandTRA_	28671	GC14P021406	TRAV13-1
TRDandTRA_	28670	GC14P021456	TRAV13-2
TRDandTRA_	28669	GC14P021462	TRAV14DV4
TRDandTRA_	28666	GC14P021535	TRAV17
TRDandTRA_	28665	GC14P021541	TRAV18
TRDandTRA_	28664	GC14P021545	TRAV19
TRDandTRA_	28663	GC14P021578	TRAV20
TRDandTRA_	28660	GC14P021624	TRAV23DV6
TRDandTRA_	28657	GC14P021661	TRAV26-1
TRDandTRA_	28656	GC14P021740	TRAV26-2
TRDandTRA_	28655	GC14P021685	TRAV27
TRDandTRA_	28653	GC14P021701	TRAV29DV5
TRDandTRA_	28644	GC14P021809	TRAV38-1
TRDandTRA_	28643	GC14P021818	TRAV38-2DV8
TRDandTRA_	28526	GC14P022001	TRDC
TRDandTRA_	28522	GC14P021988	TRDJ1
TRDandTRA_	28521	GC14P021995	TRDJ2
TRDandTRA_	28520	GC14P021997	TRDJ3
TRDandTRA_	28519	GC14P021994	TRDJ4
TRDandTRA_	28518	GC14P021634	TRDV1
TRDandTRA_	28517	GC14P021182	TRDV2

GeneAnnot

---

BLAT
GeneLoc

LocusLink_hit	Ensembl_hit	gc_id	gene_symbol
-	+	GC14P021818	TRAV38-2DV8
-	+	GC14P021841	TRAV39
-	+	GC14P022038	TRAJ40
-	+	GC14P021995	TRDJ2
-	+	GC14P021723	TRAV32
-	+	GC14P021624	TRAV23DV6
-	+	GC14P021852	TRAV40
-	+	GC14P021634	TRDV1
-	+	GC14P022034	TRAJ44
-	+	GC14P021987	TRDD3
-	+	GC14P021963	TRD@
-	+	GC14P021858	TRAV41
-	+	GC14P021759	TRAV35
-	+	GC14P022035	TRAJ43
-	+	GC14P021740	TRAV26-2
-	+	GC14P022001	TRDC
-	+	GC14P021988	TRDJ1
-	+	GC14P021650	TRAV25
-	+	GC14P021706	TRAV30
-	+	GC14P021803	TRAV37
-	+	GC14P021643	TRAV24
-	+	GC14P021670	TRAV8-7
-	+	GC14P022041	TRAJ38
-	+	GC14P021994	TRDJ4
-	+	GC14P021715	TRAV31
-	+	GC14P022033	TRAJ45
-	+	GC14P021701	TRAV29DV5
-	+	GC14P022020	TRAJ56
-	+	GC14P021160	TRA@
-	+	GC14P022031	TRAJ47
-	+	GC14P022019	TRAJ57
-	+	GC14P022016	TRAJ60
-	+	GC14P022022	TRAJ54
-	+	GC14P021685	TRAV27
-	+	GC14P021182	TRDV2
-	+	GC14P022037	TRAJ41
-	+	GC14P022025	TRAJ52
-	+	GC14P022014	TRAJ61
-	+	GC14P022040	TRAJ39
-	+	GC14P021590	TRAV21
-	+	GC14P022042	TRAJ37
-	+	GC14P021692	TRAV28
-	+	GC14P021764	TRAV36DV7
-	+	GC14P022036	TRAJ42
-	+	GC14P022028	TRAJ49
-	+	GC14P021578	TRAV20
-	+	GC14P021978	TRDD2
-	+	GC14P022029	TRAJ48
-	+	GC14P022027	TRAJ50
-	+	GC14P022021	TRAJ55
-	+	GC14P021608	TRAV22
-	+	GC14P021809	TRAV38-1
-	+	GC14P021979	TRDD1
+	-	GC14P021635	ENSG00000166056
-	+	GC14P022032	TRAJ46
-	+	GC14P022017	TRAJ59
-	+	GC14P022026	TRAJ51
-	+	GC14P022018	TRAJ58
-	+	GC14P021997	TRDJ3
-	+	GC14P021745	TRAV34
-	+	GC14P021661	TRAV26-1
-	+	GC14P021727	TRAV33
-	+	GC14P022023	TRAJ53

Genomic location based data

Error: can't execute SQL query:

Table 'ucsc_hg18_v4.all_est' doesn't exist

Genomic Location