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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5


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 GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
 de-novo genes. (
More about GeneTide.)

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GeneTide Query Results for putative gene EGC10080

  EGC gene properties:

egc_id
unigene_id
dots_gene
aceview_id
EGC10080
Hs.430300
DG.36586880
hutu

  DoTS transcripts in gene:

DT.91720140
DT.113918
DT.101956263
DT.40191911
DT.100650413
DT.100717124

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  Predicted genomic location(s) :

egc_id
Chr Str
start
end
UCSC browser
EGC10080
chr11
-
130240989
130245352
UCSC browser

Jump to the Expression  Top

   59 member transcript(s) found:

gb_id
type
Chr Str
transcription
orientation
start
end
splice site
known
RM
AI126709
EST
chr11
+
unknown
130735779
130736541
NO
-
AI671383
EST
chr11
+
unknown
130736131
130736521
NO
-
AA256267
EST
chr11
+
unknown
130736143
130736525
NO
-
R52967
EST
chr11
+
unknown
130736144
130736511
NO
-
BF447990
EST
chr11
+
unknown
130736144
130736444
NO
-
AW008845
EST
chr11
+
unknown
130736144
130736583
NO
-
N56982
EST
chr11
+
unknown
130736144
130736619
NO
-
CA311671
EST
chr11
+
unknown
130736144
130736806
NO
+
BM974069
EST
chr11
+
unknown
130736144
130736935
NO
+
AI140391
EST
chr11
+
unknown
130736144
130736541
NO
-
BE856778
EST
chr11
+
unknown
130736144
130736660
NO
-
R37438
EST
chr11
+
unknown
130736145
130736520
NO
-
AI024416
EST
chr11
+
unknown
130736146
130736611
NO
-
N34955
EST
chr11
+
unknown
130736146
130736592
NO
-
AA826943
EST
chr11
+
unknown
130736147
130736469
NO
-
AA805496
EST
chr11
+
unknown
130736147
130736600
NO
-
AW016840
EST
chr11
+
unknown
130736148
130736619
NO
-
AI204416
EST
chr11
+
unknown
130736149
130736439
NO
-
AA629392
EST
chr11
+
unknown
130736149
130736513
NO
-
AK025253
mRNA
chr11
-
alignment
130736149
130738176
YES
+
BF221867
EST
chr11
+
unknown
130736150
130736640
NO
-
AW182612
EST
chr11
+
unknown
130736150
130736547
NO
-
AK124423
mRNA
chr11
-
alignment
130736151
130740142
YES
+
AI814777
EST
chr11
+
unknown
130736151
130736633
NO
-
AA213478
EST
chr11
+
unknown
130736151
130736589
NO
-
AI569417
EST
chr11
+
unknown
130736151
130736522
NO
-
AI246249
EST
chr11
+
unknown
130736153
130736459
NO
-
AW977676
EST
chr11
+
unknown
130736153
130736645
NO
-
AI376428
EST
chr11
+
unknown
130736154
130736669
NO
-
BF593032
EST
chr11
+
unknown
130736154
130736596
NO
-
BM979366
EST
chr11
+
unknown
130736154
130736866
NO
+
AI142673
EST
chr11
+
unknown
130736154
130736600
NO
-
AI088181
EST
chr11
+
unknown
130736155
130736516
NO
-
AW001058
EST
chr11
+
unknown
130736155
130736661
NO
-
AI439579
EST
chr11
+
unknown
130736155
130736610
NO
-
AI031541
EST
chr11
+
unknown
130736155
130736524
NO
-
BU620819
EST
chr11
+
unknown
130736156
130736806
NO
+
AI867828
EST
chr11
+
unknown
130736156
130736418
NO
-
R54980
EST
chr11
+
unknown
130736157
130736539
NO
-
AI332857
EST
chr11
+
unknown
130736157
130736531
NO
-
AL833360
mRNA
chr11
-
alignment
130736158
130737609
YES
-
BU632358
EST
chr11
+
unknown
130736161
130736694
NO
-
CA388895
EST
chr11
+
unknown
130736193
130736658
NO
-
BX115669
EST
chr11
-
unknown
130736283
130736988
NO
+
BF902320
EST
chr11
-
unknown
130736355
130736704
NO
-
N44022
EST
chr11
-
unknown
130736389
130736695
NO
-
AA256195
EST
chr11
-
unknown
130736513
130737016
NO
+
N47366
EST
chr11
-
unknown
130736592
130736986
NO
+
CF141705
EST
chr11
-
unknown
130736813
130737416
NO
+
AW747822
EST
chr11
+
unknown
130736840
130737327
NO
+
CF596667
EST
chr11
-
unknown
130736866
130737620
NO
+
BU146692
EST
chr11
-
unknown
130736904
130737771
NO
+
AA344375
EST
chr11
-
unknown
130736997
130737239
NO
+
BI766197
EST
chr11
-
unknown
130737005
130737889
NO
+
AL602820
EST
chr11
-
unknown
130738352
130738936
NO
-
R52966
EST
chr11
-
unknown
130738425
130738826
NO
-
AL602548
EST
chr11
-
unknown
130738620
130739197
NO
+
BX096365
EST
chr11
+
unknown
130738709
130739426
NO
+
AA213613
EST
chr11
-
unknown
130738807
130739253
NO
+

Back to the table top  Top

   2 of the transcripts exhibit(s) expression according to GeneNote data:

GB ID P Set
Class
BRN SPC BMR SPL TMS LNG PNC PST HRT MSL KDN LVR
AI376428
52264_at
Differentialy_expressed
7
7
4
6
7
4
5
5
3
4
4
4
AA256195
54758_at
Housekeeping
8
8
7
8
8
7
8
7
7
6
7
7

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  Common Nearest Gene

GC ID
Gene Symbol
Average Distance (bp)
GC11M130221
hCG_2032978
4325



Current team:

Alexandra Sirota, Asaf Madi, Tsippi Iny Stein, Marilyn Safran (Head of the GeneCards project) and Doron Lancet (principal investigator).

Past team:

Maxim Shklar (founder), Shany Ron, Ohad Greenshpan.