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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5


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 GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
 de-novo genes. (
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Gene Association Results Summary for CD710046 [help]

GC Gene GC ID UniGene DoTS AceView GeneAnnot BGL Co Uq Score Rank
TRAV25
GC14P021650
-
-
+
-
+
0.40
0.51
0.46
1
TRAJ59
GC14P022017
-
-
-
-
+
0.20
0.01
0.14
2
TRAV32
GC14P021723
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ27
GC14P022055
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ38
GC14P022041
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ57
GC14P022019
-
-
-
-
+
0.20
0.01
0.14
2
TRAV29DV5
GC14P021701
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ29
GC14P022052
-
-
-
-
+
0.20
0.01
0.14
2
TRDD3
GC14P021987
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ33
GC14P022048
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ32
GC14P022049
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ60
GC14P022016
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ46
GC14P022032
-
-
-
-
+
0.20
0.01
0.14
2
TRAV38-1
GC14P021809
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ41
GC14P022037
-
-
-
-
+
0.20
0.01
0.14
2
TRDJ3
GC14P021997
-
-
-
-
+
0.20
0.01
0.14
2
TRAV36DV7
GC14P021764
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ30
GC14P022051
-
-
-
-
+
0.20
0.01
0.14
2
TRAV26-2
GC14P021740
-
-
-
-
+
0.20
0.01
0.14
2
TRD@
GC14P021963
-
-
-
-
+
0.20
0.01
0.14
2
TRAV40
GC14P021852
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ36
GC14P022043
-
-
-
-
+
0.20
0.01
0.14
2
TRAV27
GC14P021685
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ44
GC14P022034
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ45
GC14P022033
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ56
GC14P022020
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ26
GC14P022057
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ28
GC14P022054
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ34
GC14P022046
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ37
GC14P022042
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ48
GC14P022029
-
-
-
-
+
0.20
0.01
0.14
2
TRAV41
GC14P021858
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ49
GC14P022028
-
-
-
-
+
0.20
0.01
0.14
2
TRAV31
GC14P021715
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ52
GC14P022025
-
-
-
-
+
0.20
0.01
0.14
2
TRDJ2
GC14P021995
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ47
GC14P022031
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ24
GC14P022059
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ31
GC14P022050
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ42
GC14P022036
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ50
GC14P022027
-
-
-
-
+
0.20
0.01
0.14
2
TRAV26-1
GC14P021661
-
-
-
-
+
0.20
0.01
0.14
2
TRAV30
GC14P021706
-
-
-
-
+
0.20
0.01
0.14
2
TRAV8-7
GC14P021670
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ35
GC14P022045
-
-
-
-
+
0.20
0.01
0.14
2
TRAV28
GC14P021692
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ58
GC14P022018
-
-
-
-
+
0.20
0.01
0.14
2
TRDD2
GC14P021978
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ40
GC14P022038
-
-
-
-
+
0.20
0.01
0.14
2
TRAV33
GC14P021727
-
-
-
-
+
0.20
0.01
0.14
2
TRDJ4
GC14P021994
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ55
GC14P022021
-
-
-
-
+
0.20
0.01
0.14
2
TRDJ1
GC14P021988
-
-
-
-
+
0.20
0.01
0.14
2
TRAV35
GC14P021759
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ39
GC14P022040
-
-
-
-
+
0.20
0.01
0.14
2
TRA@
GC14P021160
-
-
-
-
+
0.20
0.01
0.14
2
TRAV37
GC14P021803
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ43
GC14P022035
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ53
GC14P022023
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ61
GC14P022014
-
-
-
-
+
0.20
0.01
0.14
2
ENSG00000166056
GC14P021635
-
-
-
-
+
0.20
0.01
0.14
2
TRDV2
GC14P021182
-
-
-
-
+
0.20
0.01
0.14
2
TRDD1
GC14P021979
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ51
GC14P022026
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ54
GC14P022022
-
-
-
-
+
0.20
0.01
0.14
2
TRAV34
GC14P021745
-
-
-
-
+
0.20
0.01
0.14
2
TRAV38-2DV8
GC14P021818
-
-
-
-
+
0.20
0.01
0.14
2
TRAV39
GC14P021841
-
-
-
-
+
0.20
0.01
0.14
2
TRAJ25
GC14P022058
-
-
-
-
+
0.20
0.01
0.14
2
TRDC
GC14P022001
-
-
-
-
+
0.20
0.01
0.14
2


Top

GeneTide Query Results for the EST CD710046 [help]

  General links [help]

Similar transcripts

FASTA

UCSC Genome Browser

Top

  Validation Level [help]

Validated by RepeatMasker Validation Score
UniGene DoTS AceView
+
-
+
repeat_name
repeat_class
repeat_family
L1PA5
LINE
L1

2 - Medium

Top

  Resources Annotation [help]

Resource

Data

UniGene

unigene_id
locuslink_id
gc_id
gene_symbol
Hs.495112



DoTs

---

AceView

av_symbol
locuslink_id
gc_id
gene_symbol
TRAV25
28658
GC14P021650
TRAV25

GeneAnnot

---

BLAT
GeneLoc

LocusLink_hit
Ensembl_hit
gc_id
gene_symbol
-
+
GC14P021818
TRAV38-2DV8
-
+
GC14P021841
TRAV39
-
+
GC14P021723
TRAV32
-
+
GC14P022045
TRAJ35
-
+
GC14P021852
TRAV40
-
+
GC14P022034
TRAJ44
-
+
GC14P021858
TRAV41
-
+
GC14P021740
TRAV26-2
-
+
GC14P022001
TRDC
-
+
GC14P021988
TRDJ1
-
+
GC14P021650
TRAV25
-
+
GC14P021803
TRAV37
-
+
GC14P021715
TRAV31
-
+
GC14P022033
TRAJ45
-
+
GC14P021701
TRAV29DV5
-
+
GC14P022049
TRAJ32
-
+
GC14P021160
TRA@
-
+
GC14P022031
TRAJ47
-
+
GC14P022046
TRAJ34
-
+
GC14P022019
TRAJ57
-
+
GC14P022016
TRAJ60
-
+
GC14P021182
TRDV2
-
+
GC14P022037
TRAJ41
-
+
GC14P022014
TRAJ61
-
+
GC14P022057
TRAJ26
-
+
GC14P022059
TRAJ24
-
+
GC14P022042
TRAJ37
+
-
GC14P021635
ENSG00000166056
-
+
GC14P022032
TRAJ46
-
+
GC14P022017
TRAJ59
-
+
GC14P022018
TRAJ58
-
+
GC14P021745
TRAV34
-
+
GC14P021727
TRAV33
-
+
GC14P022048
TRAJ33
-
+
GC14P022038
TRAJ40
-
+
GC14P021995
TRDJ2
-
+
GC14P022051
TRAJ30
-
+
GC14P022050
TRAJ31
-
+
GC14P021987
TRDD3
-
+
GC14P021963
TRD@
-
+
GC14P021759
TRAV35
-
+
GC14P022058
TRAJ25
-
+
GC14P022035
TRAJ43
-
+
GC14P022043
TRAJ36
-
+
GC14P021706
TRAV30
-
+
GC14P021670
TRAV8-7
-
+
GC14P022041
TRAJ38
-
+
GC14P021994
TRDJ4
-
+
GC14P022020
TRAJ56
-
+
GC14P021685
TRAV27
-
+
GC14P022022
TRAJ54
-
+
GC14P022025
TRAJ52
-
+
GC14P022040
TRAJ39
-
+
GC14P021692
TRAV28
-
+
GC14P021764
TRAV36DV7
-
+
GC14P022055
TRAJ27
-
+
GC14P022028
TRAJ49
-
+
GC14P022036
TRAJ42
-
+
GC14P021978
TRDD2
-
+
GC14P022029
TRAJ48
-
+
GC14P022052
TRAJ29
-
+
GC14P021809
TRAV38-1
-
+
GC14P022021
TRAJ55
-
+
GC14P022027
TRAJ50
-
+
GC14P021979
TRDD1
-
+
GC14P021997
TRDJ3
-
+
GC14P022026
TRAJ51
-
+
GC14P022054
TRAJ28
-
+
GC14P021661
TRAV26-1
-
+
GC14P022023
TRAJ53

Top

  Genomic location based data [help]

Genomic Location

Chr Str
orientation
chrom_start
chrom_end
cdna_start
cdna_end
length
matches
chr14
+
unknown
22580311
22580982
36
425
389
384

Gene Territory

Str
start
end
gc_id
gene_symbol
+
21634167
22003154
GC14P021635
ENSG00000166056
+
21181363
22090936
GC14P021182
TRDV2
+
21159897
22090915
GC14P021160
TRA@
+
21650216
21650824
GC14P021650
TRAV25
+
21661325
21662083
GC14P021661
TRAV26-1
+
21670355
21670836
GC14P021670
TRAV8-7
+
21685886
21686427
GC14P021685
TRAV27
+
21692852
21693411
GC14P021692
TRAV28
+
21701085
21701606
GC14P021701
TRAV29DV5
+
21706165
21706724
GC14P021706
TRAV30
+
21715010
21715601
GC14P021715
TRAV31
+
21723298
21723797
GC14P021723
TRAV32
+
21727892
21728448
GC14P021727
TRAV33
+
21740317
21741102
GC14P021740
TRAV26-2
+
21745270
21745865
GC14P021745
TRAV34
+
21759632
21760211
GC14P021759
TRAV35
+
21764497
21764989
GC14P021764
TRAV36DV7
+
21803472
21804896
GC14P021803
TRAV37
+
21809694
21810286
GC14P021809
TRAV38-1
+
21818874
21819471
GC14P021818
TRAV38-2DV8
+
21841779
21842278
GC14P021841
TRAV39
+
21852762
21853191
GC14P021852
TRAV40
+
21858460
21858963
GC14P021858
TRAV41
+
21961377
22005409
GC14P021963
TRD@
+
21977379
21977386
GC14P021979
TRDD1
+
21977839
21977847
GC14P021978
TRDD2
+
21987945
21987957
GC14P021987
TRDD3
+
21988921
21988971
GC14P021988
TRDJ1
+
21994081
21994128
GC14P021994
TRDJ4
+
21995521
21995574
GC14P021995
TRDJ2
+
21997930
21997988
GC14P021997
TRDJ3
+
22001746
22005409
GC14P022001
TRDC
+
22014146
22014205
GC14P022014
TRAJ61
+
22015136
22015192
GC14P022016
TRAJ60
+
22015383
22015436
GC14P022017
TRAJ59
+
22016536
22016598
GC14P022018
TRAJ58
+
22017701
22017763
GC14P022019
TRAJ57
+
22018350
22018411
GC14P022020
TRAJ56
+
22020526
22020582
GC14P022021
TRAJ55
+
22021116
22021175
GC14P022022
TRAJ54
+
22021833
22021898
GC14P022023
TRAJ53
+
22025056
22025124
GC14P022025
TRAJ52
+
22026011
22026073
GC14P022026
TRAJ51
+
22027421
22027480
GC14P022027
TRAJ50
+
22028316
22028371
GC14P022028
TRAJ49
+
22029319
22029381
GC14P022029
TRAJ48
+
22031678
22031734
GC14P022031
TRAJ47
+
22032229
22032291
GC14P022032
TRAJ46
+
22032751
22032816
GC14P022033
TRAJ45
+
22033646
22033708
GC14P022034
TRAJ44
+
22034736
22034789
GC14P022035
TRAJ43
+
22035712
22035777
GC14P022036
TRAJ42
+
22036482
22036543
GC14P022037
TRAJ41
+
22038512
22038572
GC14P022038
TRAJ40
+
22040425
22040487
GC14P022040
TRAJ39
+
22041055
22041116
GC14P022041
TRAJ38
+
22042575
22042637
GC14P022042
TRAJ37
+
22043936
22043995
GC14P022043
TRAJ36
+
22045469
22045527
GC14P022045
TRAJ35
+
22046491
22046548
GC14P022046
TRAJ34
+
22047427
22047483
GC14P022048
TRAJ33
+
22048165
22048230
GC14P022049
TRAJ32
+
22049791
22049847
GC14P022050
TRAJ31
+
22051674
22051730
GC14P022051
TRAJ30
+
22052761
22052820
GC14P022052
TRAJ29
+
22054441
22054506
GC14P022054
TRAJ28
+
22055091
22055149
GC14P022055
TRAJ27
+
22057264
22057323
GC14P022057
TRAJ26
+
22057630
22057689
GC14P022058
TRAJ25
+
22058787
22058849
GC14P022059
TRAJ24

Splice Site
Known

YES

Repeat Masker

chrom
Str
start
end
repName
repClass
repFamily
14
+
21892947
21892950
L1PA5
LINE
L1


Current team:

Alexandra Sirota, Asaf Madi, Tsippi Iny Stein, Marilyn Safran (Head of the GeneCards project) and Doron Lancet (principal investigator).

Past team:

Maxim Shklar (founder), Shany Ron, Ohad Greenshpan.