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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5


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 GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
 de-novo genes. (
More about GeneTide.)

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Gene Association Results Summary for BC068196 [help]

GC Gene GC ID UniGene DoTS AceView GeneAnnot BGL Co Uq Score Rank
JDP2
GC14P074964
+
-
+
-
+
0.60
1.00
0.82
1


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GeneTide Query Results for the mRNA BC068196 [help]

  General links [help]

Similar transcripts

FASTA

UCSC Genome Browser

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  Validation Level [help]

Validated by RepeatMasker Validation Score
UniGene DoTS AceView
+
+
+
repeat_name
repeat_class
repeat_family
T-rich
Low
complexity
(GGA)n
Simple
repeat

3 - High

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  Resources Annotation [help]

Resource

Data

UniGene

unigene_id
locuslink_id
gc_id
gene_symbol
Hs.196482
122953
GC14P074964
JDP2

DoTs

dots_id
locuslink_id
gc_id
gene_symbol
DT.100656624



AceView

av_symbol
locuslink_id
gc_id
gene_symbol
JDP2
122953
GC14P074964
JDP2

GeneAnnot

---

BLAT
GeneLoc

LocusLink_hit
Ensembl_hit
gc_id
gene_symbol
+
+
GC14P074964
JDP2

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  Genomic location based data [help]

Genomic Location

Chr Str
orientation
chrom_start
chrom_end
cdna_start
cdna_end
length
matches
chr14
+
unknown
75895059
75937158
0
1742
1742
1641

Gene Territory

Str
start
end
gc_id
gene_symbol
+
74964813
75006909
GC14P074964
JDP2

Splice Site
Known

YES

Repeat Masker

chrom
Str
start
end
repName
repClass
repFamily
14
+
75006630
75006910
T-rich
Low
complexity
14
+
75005745
75006628
(GGA)n
Simple
repeat
14
+
75005745
75006628
T-rich
Low
complexity


Current team:

Alexandra Sirota, Asaf Madi, Tsippi Iny Stein, Marilyn Safran (Head of the GeneCards project) and Doron Lancet (principal investigator).

Past team:

Maxim Shklar (founder), Shany Ron, Ohad Greenshpan.