GeneTide V1.3

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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
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GeneAnnot v1.5

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GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
de-novo genes. (More about GeneTide.)

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Gene Association Results Summary for AW794552

GC Gene	GC ID	UniGene	DoTS	AceView	GeneAnnot	BGL	Co	Uq	Score	Rank
TRBC2	GC07P142208	-	-	+	-	+	0.40	0.18	0.31	1
PRSS1	GC07P142136	+	-	-	-	-	0.20	0.33	0.27	2
TRB@	GC07P141648	-	-	-	-	+	0.20	0.17	0.18	3
TRBC1	GC07P141672	-	-	+	-	-	0.20	0.01	0.14	4
TRBV3-1	GC07P141654	-	-	+	-	-	0.20	0.01	0.14	4
TRBV19	GC07P141671	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ2-6	GC07P142213	-	-	+	-	-	0.20	0.01	0.14	4
TRBV7-3	GC07P141753	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ2-3	GC07P142215	-	-	+	-	-	0.20	0.01	0.14	4
TRBV18	GC07P142022	-	-	+	-	-	0.20	0.01	0.14	4
TRBV15	GC07P142009	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ2-2	GC07P142217	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ1-2	GC07P142219	-	-	+	-	-	0.20	0.01	0.14	4
TRBV8-2	GC07P141754	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ1-1	GC07P142201	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ2-1	GC07P142218	-	-	+	-	-	0.20	0.01	0.14	4
TRBV29-1	GC07P142129	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ1-3	GC07P142195	-	-	+	-	-	0.20	0.01	0.14	4
TRBV28	GC07P142108	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ1-6	GC07P142196	-	-	+	-	-	0.20	0.01	0.14	4
TRBV7-2	GC07P141729	-	-	+	-	-	0.20	0.01	0.14	4
TRBV13	GC07P141927	-	-	+	-	-	0.20	0.01	0.14	4
TRBV21-1	GC07P141922	-	-	+	-	-	0.20	0.01	0.14	4
TRBV5-5	GC07P141851	-	-	+	-	-	0.20	0.01	0.14	4
TRBV5-6	GC07P141869	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ2-5	GC07P142204	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ1-5	GC07P142202	-	-	+	-	-	0.20	0.01	0.14	4
TRBV5-4	GC07P141833	-	-	+	-	-	0.20	0.01	0.14	4
TRBV12-3	GC07P141949	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ2-2P	GC07P142216	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ1-4	GC07P142223	-	-	+	-	-	0.20	0.01	0.14	4
TRBJ2-7	GC07P142205	-	-	+	-	-	0.20	0.01	0.14	4

GeneTide Query Results for the EST AW794552

General links

Similar transcripts	FASTA	UCSC Genome Browser

Validation Level

Validated by

RepeatMasker

Validation Score

UniGene	DoTS	AceView
+	+	+

---

4 - Very High

Resources Annotation

Resource

Data

UniGene

unigene_id	locuslink_id	gc_id	gene_symbol
Hs.622865	5644	GC07P142136	PRSS1

DoTs

dots_id	locuslink_id	gc_id	gene_symbol
DT.95166463

AceView

av_symbol	locuslink_id	gc_id	gene_symbol
TRBVandTRBJ_	28638	GC07P142208	TRBC2
TRBVandTRBJ_	28635	GC07P142201	TRBJ1-1
TRBVandTRBJ_	28634	GC07P142219	TRBJ1-2
TRBVandTRBJ_	28633	GC07P142195	TRBJ1-3
TRBVandTRBJ_	28632	GC07P142223	TRBJ1-4
TRBVandTRBJ_	28631	GC07P142202	TRBJ1-5
TRBVandTRBJ_	28630	GC07P142196	TRBJ1-6
TRBVandTRBJ_	28629	GC07P142218	TRBJ2-1
TRBVandTRBJ_	28628	GC07P142217	TRBJ2-2
TRBVandTRBJ_	28627	GC07P142216	TRBJ2-2P
TRBVandTRBJ_	28626	GC07P142215	TRBJ2-3
TRBVandTRBJ_	28624	GC07P142204	TRBJ2-5
TRBVandTRBJ_	28623	GC07P142213	TRBJ2-6
TRBVandTRBJ_	28622	GC07P142205	TRBJ2-7
TRBVandTRBJ_	28619	GC07P141654	TRBV3-1
TRBVandTRBJ_	28611	GC07P141833	TRBV5-4
TRBVandTRBJ_	28610	GC07P141851	TRBV5-5
TRBVandTRBJ_	28609	GC07P141869	TRBV5-6
TRBVandTRBJ_	28596	GC07P141729	TRBV7-2
TRBVandTRBJ_	28595	GC07P141753	TRBV7-3
TRBVandTRBJ_	28587	GC07P141754	TRBV8-2
TRBVandTRBJ_	28577	GC07P141949	TRBV12-3
TRBVandTRBJ_	28574	GC07P141927	TRBV13
TRBVandTRBJ_	28572	GC07P142009	TRBV15
TRBVandTRBJ_	28569	GC07P142022	TRBV18
TRBVandTRBJ_	28568	GC07P141671	TRBV19
TRBVandTRBJ_	28566	GC07P141922	TRBV21-1
TRBVandTRBJ_	28559	GC07P142108	TRBV28
TRBVandTRBJ_	28558	GC07P142129	TRBV29-1
TRBVandTRBJ_	28639	GC07P141672	TRBC1

GeneAnnot

---

BLAT
GeneLoc

LocusLink_hit	Ensembl_hit	gc_id	gene_symbol
-	+	GC07P141648	TRB@
-	+	GC07P142208	TRBC2

Genomic location based data

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Table 'ucsc_hg18_v4.all_est' doesn't exist

Genomic Location