GeneTide V1.3

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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5

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GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
de-novo genes. (More about GeneTide.)

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Gene Association Results Summary for AF485436

GC Gene	GC ID	UniGene	DoTS	AceView	GeneAnnot	BGL	Co	Uq	Score	Rank
IGKV2-19	GC02M089215	-	-	-	-	+	0.20	0.05	0.15	1
IGKV2-10	GC02M089100	-	-	-	-	+	0.20	0.05	0.15	1
IGKV1-6	GC02M089050	-	-	-	-	+	0.20	0.05	0.15	1
IGKV3-11	GC02M089107	-	-	-	-	+	0.20	0.05	0.15	1
IGKV2-23	GC02M089252	-	-	-	-	+	0.20	0.05	0.15	1
IGKV1-22	GC02M089251	-	-	-	-	+	0.20	0.05	0.15	1
IGKV2-14	GC02M089159	-	-	-	-	+	0.20	0.05	0.15	1
IGKV1-13	GC02M089126	-	-	-	-	+	0.20	0.05	0.15	1
IGKV3-20	GC02M089224	-	-	-	-	+	0.20	0.05	0.15	1
IGKV1-12	GC02M089120	-	-	-	-	+	0.20	0.05	0.15	1
IGKV1-16	GC02M089182	-	-	-	-	+	0.20	0.05	0.15	1
IGKV7-3	GC02M089016	-	-	-	-	+	0.20	0.05	0.15	1
IGKV1-17	GC02M089181	-	-	-	-	+	0.20	0.05	0.15	1
IGKV1-8	GC02M089077	-	-	-	-	+	0.20	0.05	0.15	1
IGKV2-4	GC02M089018	-	-	-	-	+	0.20	0.05	0.15	1
IGKV3-7	GC02M089061	-	-	-	-	+	0.20	0.05	0.15	1
IGKV3-15	GC02M089166	-	-	-	-	+	0.20	0.05	0.15	1
IGKV1-9	GC02M089090	-	-	-	-	+	0.20	0.05	0.15	1
IGKV6-21	GC02M089240	-	-	-	-	+	0.20	0.05	0.15	1
IGKJ1	GC02M088942	-	-	-	-	+	0.20	0.05	0.15	1
IGKV1-5	GC02M088938	-	-	-	-	+	0.20	0.05	0.15	1
IGKV2-18	GC02M089209	-	-	-	-	+	0.20	0.05	0.15	1

GeneTide Query Results for the mRNA AF485436

General links

Similar transcripts	FASTA	UCSC Genome Browser

Validation Level

Validated by

RepeatMasker

Validation Score

UniGene	DoTS	AceView
+	+	-

---

3 - High

Resources Annotation

Resource

Data

UniGene

unigene_id	locuslink_id	gc_id	gene_symbol
Hs.535593

DoTs

dots_id	locuslink_id	gc_id	gene_symbol
DT.97858255

AceView

---

GeneAnnot

---

BLAT
GeneLoc

LocusLink_hit	Ensembl_hit	gc_id	gene_symbol
-	+	GC02M089251	IGKV1-22
+	+	GC02M089166	IGKV3-15
-	+	GC02M088938	IGKV1-5
-	+	GC02M089120	IGKV1-12
-	+	GC02M089252	IGKV2-23
+	+	GC02M089100	IGKV2-10
-	+	GC02M089018	IGKV2-4
-	+	GC02M089107	IGKV3-11
-	+	GC02M089240	IGKV6-21
-	+	GC02M089215	IGKV2-19
+	+	GC02M089224	IGKV3-20
-	+	GC02M089061	IGKV3-7
-	+	GC02M089050	IGKV1-6
-	+	GC02M089090	IGKV1-9
-	+	GC02M089159	IGKV2-14
-	+	GC02M089182	IGKV1-16
+	+	GC02M089209	IGKV2-18
-	+	GC02M089077	IGKV1-8
+	+	GC02M089016	IGKV7-3
-	+	GC02M089126	IGKV1-13
-	+	GC02M088942	IGKJ1
+	+	GC02M089181	IGKV1-17

Genomic location based data

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Table 'ucsc_hg18_v4.all_est' doesn't exist

Genomic Location