GeneTide V1.3

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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
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GeneAnnot v1.5

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GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
de-novo genes. (More about GeneTide.)

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Gene Association Results Summary for AF471581

GC Gene	GC ID	UniGene	DoTS	AceView	GeneAnnot	BGL	Co	Uq	Score	Rank
IGHVIII-26-1	GC14M105836	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-36	GC14M105919	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-21	GC14M105762	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-19	GC14M105724	-	-	-	-	+	0.20	0.02	0.14	1
IGHV4-28	GC14M105851	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-30	GC14M105862	-	-	-	-	+	0.20	0.02	0.14	1
IGHVIII-47-1	GC14M106058	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-40-1	GC14M105967	-	-	-	-	+	0.20	0.02	0.14	1
IGHV7-34-1	GC14M105904	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-33	GC14M105888	-	-	-	-	+	0.20	0.02	0.14	1
LOC192128	GC14M105706	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-33-1	GC14M105894	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-46-1	GC14M106042	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-32	GC14M105883	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-20	GC14M105738	-	-	-	-	+	0.20	0.02	0.14	1
IGHVIV-44-1	GC14M106016	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-16	GC14M105692	-	-	-	-	+	0.20	0.02	0.14	1
IGHV7-27	GC14M105845	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-38	GC14M105937	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-22	GC14M105785	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-43-1	GC14M105999	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-28-1	GC14M105856	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-30-1	GC14M105869	-	-	-	-	+	0.20	0.02	0.14	1
IGHV7-40	GC14M105952	-	-	-	-	+	0.20	0.02	0.14	1
IGHV1-46	GC14M106038	-	-	-	-	+	0.20	0.02	0.14	1
IGHV1-17	GC14M105702	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-41	GC14M105970	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-20-1	GC14M105740	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-35	GC14M105916	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-47	GC14M106046	-	-	-	-	+	0.20	0.02	0.14	1
IGHV2-26	GC14M105828	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-43	GC14M105997	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-25	GC14M105816	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-44-2	GC14M106021	-	-	-	-	+	0.20	0.02	0.14	1
IGHVIII-38-1	GC14M105944	-	-	-	-	+	0.20	0.02	0.14	1
LOC192131	GC14M105884	-	-	-	-	+	0.20	0.02	0.14	1
IGHV1-24	GC14M105804	-	-	-	-	+	0.20	0.02	0.14	1
IGHVIII-44	GC14M106005	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-23	GC14M105796	-	-	-	-	+	0.20	0.02	0.14	1
LOC192132	GC14M105859	-	-	-	-	+	0.20	0.02	0.14	1
IGHVIII-25-1	GC14M105821	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-42	GC14M105990	-	-	-	-	+	0.20	0.02	0.14	1
IGHVIII-16-1	GC14M105698	-	-	-	-	+	0.20	0.02	0.14	1
ENSG00000205387	GC14M105996	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-30-2	GC14M105871	-	-	-	-	+	0.20	0.02	0.14	1
IGHV4-34	GC14M105900	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-26-2	GC14M105841	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-15-1	GC14M105691	-	-	-	-	+	0.20	0.02	0.14	1
IGHV1-18	GC14M105712	-	-	-	-	+	0.20	0.02	0.14	1
IGHV1-45	GC14M106033	-	-	-	-	+	0.20	0.02	0.14	1
IGHVIII-22-2	GC14M105792	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-29	GC14M105858	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-37	GC14M105923	-	-	-	-	+	0.20	0.02	0.14	1
IGHV4-39	GC14M105948	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-33-2	GC14M105896	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-31-1	GC14M105881	-	-	-	-	+	0.20	0.02	0.14	1
IGHVII-22-1	GC14M105790	-	-	-	-	+	0.20	0.02	0.14	1
IGHV3-48	GC14M106045	-	-	-	-	+	0.20	0.02	0.14	1
IGHV4-31	GC14M105876	-	-	-	-	+	0.20	0.02	0.14	1

GeneTide Query Results for the mRNA AF471581

General links

Similar transcripts	FASTA	UCSC Genome Browser

Validation Level

Validated by

RepeatMasker

Validation Score

UniGene	DoTS	AceView
-	+	-

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2 - Medium

Resources Annotation

Resource

Data

UniGene

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DoTs

dots_id	locuslink_id	gc_id	gene_symbol
DT.101985816

AceView

---

GeneAnnot

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BLAT
GeneLoc

LocusLink_hit	Ensembl_hit	gc_id	gene_symbol
-	+	GC14M105724	IGHV3-19
-	+	GC14M105762	IGHV3-21
-	+	GC14M105896	IGHV3-33-2
-	+	GC14M105881	IGHVII-31-1
-	+	GC14M105856	IGHVII-28-1
+	+	GC14M105888	IGHV3-33
-	+	GC14M105970	IGHV3-41
-	+	GC14M105894	IGHVII-33-1
-	+	GC14M105997	IGHV3-43
-	+	GC14M105967	IGHVII-40-1
+	+	GC14M105712	IGHV1-18
+	-	GC14M105996	ENSG00000205387
-	+	GC14M105884	LOC192131
-	+	GC14M105923	IGHV3-37
-	+	GC14M105845	IGHV7-27
+	+	GC14M106033	IGHV1-45
-	+	GC14M105816	IGHV3-25
-	+	GC14M105869	IGHVII-30-1
-	+	GC14M105858	IGHV3-29
+	+	GC14M105804	IGHV1-24
-	+	GC14M105706	LOC192128
-	+	GC14M105740	IGHVII-20-1
-	+	GC14M105904	IGHV7-34-1
+	+	GC14M105900	IGHV4-34
-	+	GC14M105691	IGHVII-15-1
-	+	GC14M106042	IGHVII-46-1
+	+	GC14M105862	IGHV3-30
+	+	GC14M105937	IGHV3-38
-	+	GC14M105944	IGHVIII-38-1
-	+	GC14M105738	IGHV3-20
-	+	GC14M105919	IGHV3-36
+	+	GC14M105876	IGHV4-31
-	+	GC14M105821	IGHVIII-25-1
-	+	GC14M106005	IGHVIII-44
-	+	GC14M105790	IGHVII-22-1
-	+	GC14M105871	IGHV3-30-2
-	+	GC14M105883	IGHV3-32
-	+	GC14M105702	IGHV1-17
-	+	GC14M105999	IGHVII-43-1
-	+	GC14M105841	IGHVII-26-2
-	+	GC14M105859	LOC192132
-	+	GC14M106021	IGHVII-44-2
-	+	GC14M105990	IGHV3-42
+	+	GC14M105948	IGHV4-39
-	+	GC14M105698	IGHVIII-16-1
-	+	GC14M105792	IGHVIII-22-2
-	+	GC14M106016	IGHVIV-44-1
-	+	GC14M105952	IGHV7-40
-	+	GC14M105796	IGHV3-23
+	+	GC14M105916	IGHV3-35
-	+	GC14M105692	IGHV3-16
-	+	GC14M105836	IGHVIII-26-1
+	-	GC14M106045	IGHV3-48
-	+	GC14M106046	IGHV3-47
+	+	GC14M106038	IGHV1-46
+	+	GC14M105828	IGHV2-26
+	+	GC14M105851	IGHV4-28
-	+	GC14M106058	IGHVIII-47-1
-	+	GC14M105785	IGHV3-22

Genomic location based data

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Table 'ucsc_hg18_v4.all_est' doesn't exist

Genomic Location