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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5


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 GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
 de-novo genes. (
More about GeneTide.)

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GeneTide Query Results for U95 Probe set 85946_at which was created from Genbank accession AA935529


Gene Association Results Summary for AA935529 [help]

GC Gene GC ID UniGene DoTS AceView GeneAnnot BGL Co Uq Score Rank
NOS1
GC12M116111
+
-
+
-
-
0.40
1.00
0.76
1


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GeneTide Query Results for the EST AA935529 [help]

  General links [help]

Similar transcripts

FASTA

UCSC Genome Browser

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  Validation Level [help]

Validated by RepeatMasker Validation Score
UniGene DoTS AceView
+
+
+
repeat_name
repeat_class
repeat_family
AluJo
SINE
Alu

3 - High

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  Resources Annotation [help]

Resource

Data

UniGene

unigene_id
locuslink_id
gc_id
gene_symbol
Hs.253420
4842
GC12M116111
NOS1

DoTs

dots_id
locuslink_id
gc_id
gene_symbol
DT.454960



AceView

av_symbol
locuslink_id
gc_id
gene_symbol
NOS1
4842
GC12M116111
NOS1

GeneAnnot

gb_id
probe_set
resource
gc_id
gene_symbol
AA935529
85946_at
3.probe_set_to_mrna


BLAT
GeneLoc

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  Genomic location based data [help]

Genomic Location

Chr Str
orientation
chrom_start
chrom_end
cdna_start
cdna_end
length
matches
chr12
+
unknown
117648007
117648486
0
479
479
404

Nearest Gene

Str
start
end
distance (bp)
gc_id
gene_symbol
-
116135362
116283965
2493
GC12M116111
NOS1

Splice Site
Known

NO

Repeat Masker

chrom
Str
start
end
repName
repClass
repFamily
12
-
116132390
116132869
AluJo
SINE
Alu


Current team:

Alexandra Sirota, Asaf Madi, Tsippi Iny Stein, Marilyn Safran (Head of the GeneCards project) and Doron Lancet (principal investigator).

Past team:

Maxim Shklar (founder), Shany Ron, Ohad Greenshpan.