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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5


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 GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
 de-novo genes. (
More about GeneTide.)

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GeneTide Query Results for U95 Probe set 81642_at which was created from Genbank accession AI827849


Gene Association Results Summary for AI827849 [help]

GC Gene GC ID UniGene DoTS AceView GeneAnnot BGL Co Uq Score Rank
VTI1A
GC10P114197
+
-
+
+
-
0.60
1.00
0.82
1


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GeneTide Query Results for the EST AI827849 [help]

  General links [help]

Similar transcripts

FASTA

UCSC Genome Browser

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  Validation Level [help]

Validated by RepeatMasker Validation Score
UniGene DoTS AceView
+
+
+
---

4 - Very High

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  Resources Annotation [help]

Resource

Data

UniGene

unigene_id
locuslink_id
gc_id
gene_symbol
Hs.194554
143187
GC10P114197
VTI1A

DoTs

dots_id
locuslink_id
gc_id
gene_symbol
DT.407866



AceView

av_symbol
locuslink_id
gc_id
gene_symbol
VTI1A
143187
GC10P114197
VTI1A

GeneAnnot

gb_id
probe_set
resource
gc_id
gene_symbol
AI827849
81642_at
1.probe_set_to_gc
GC10P114197
VTI1A

BLAT
GeneLoc

---

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  Genomic location based data [help]

Genomic Location

Chr Str
orientation
chrom_start
chrom_end
cdna_start
cdna_end
length
matches
chr10
-
unknown
114578023
114578503
2
482
480
480

Nearest Gene

Str
start
end
distance (bp)
gc_id
gene_symbol
+
114603467
114605111
34974
GC10P114600
LOC143188

Splice Site
Known

NO


Current team:

Alexandra Sirota, Asaf Madi, Tsippi Iny Stein, Marilyn Safran (Head of the GeneCards project) and Doron Lancet (principal investigator).

Past team:

Maxim Shklar (founder), Shany Ron, Ohad Greenshpan.