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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5


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 GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
 de-novo genes. (
More about GeneTide.)

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GeneTide Query Results for U95 Probe set 61491_at which was created from Genbank accession AI283435


Gene Association Results Summary for AI283435 [help]

GC Gene GC ID UniGene DoTS AceView GeneAnnot BGL Co Uq Score Rank
PENK
GC08M057516
-
-
+
-
+
0.40
0.75
0.60
1
LOC442388
GC08M057448
-
-
+
-
-
0.20
0.25
0.23
2


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GeneTide Query Results for the EST AI283435 [help]

  General links [help]

Similar transcripts

FASTA

UCSC Genome Browser

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  Validation Level [help]

Validated by RepeatMasker Validation Score
UniGene DoTS AceView
+
+
+
---

4 - Very High

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  Resources Annotation [help]

Resource

Data

UniGene

unigene_id
locuslink_id
gc_id
gene_symbol
Hs.104920



DoTs

dots_id
locuslink_id
gc_id
gene_symbol
DT.107394



AceView

av_symbol
locuslink_id
gc_id
gene_symbol
PENK
442388
GC08M057448
LOC442388
PENK
5179
GC08M057516
PENK

GeneAnnot

gb_id
probe_set
resource
gc_id
gene_symbol
AI283435
61491_at
4.est_unigene_cluster


BLAT
GeneLoc

LocusLink_hit
Ensembl_hit
gc_id
gene_symbol
+
-
GC08M057516
PENK

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  Genomic location based data [help]

Genomic Location

Chr Str
orientation
chrom_start
chrom_end
cdna_start
cdna_end
length
matches
chr8
+
unknown
57349232
57358499
1
529
528
323

Gene Territory

Str
start
end
gc_id
gene_symbol
-
57516070
57521143
GC08M057516
PENK

Splice Site
Known

YES


Current team:

Alexandra Sirota, Asaf Madi, Tsippi Iny Stein, Marilyn Safran (Head of the GeneCards project) and Doron Lancet (principal investigator).

Past team:

Maxim Shklar (founder), Shany Ron, Ohad Greenshpan.