GeneTide V1.3

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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5

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GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
de-novo genes. (More about GeneTide.)

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GeneTide Query Results for U95 Probe set 35935_at which was created from Genbank accession Y08683

Gene Association Results Summary for Y08683

GC Gene	GC ID	UniGene	DoTS	AceView	GeneAnnot	BGL	Co	Uq	Score	Rank
CPT1B	GC22M049354	+	-	+	+	-	0.60	0.50	0.55	1
CHKB	GC22M049364	-	-	+	+	-	0.40	0.25	0.33	2
CHKB-CPT1B	GC22M049355	-	-	-	-	+	0.20	0.25	0.23	3

GeneTide Query Results for the mRNA Y08683

General links

Similar transcripts	FASTA	UCSC Genome Browser

Validation Level

Validated by

RepeatMasker

Validation Score

UniGene	DoTS	AceView
+	-	+

---

3 - High

Resources Annotation

Resource

Data

UniGene

unigene_id	locuslink_id	gc_id	gene_symbol
Hs.439777	1375	GC22M049354	CPT1B

DoTs

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AceView

av_symbol	locuslink_id	gc_id	gene_symbol
CHKB	1120	GC22M049364	CHKB
CHKB	1375	GC22M049354	CPT1B

GeneAnnot

gb_id	probe_set	resource	gc_id	gene_symbol
Y08683	35935_at	1.probe_set_to_gc	GC22M049364	CHKB
Y08683	35935_at	1.probe_set_to_gc	GC22M049364	CHKB
Y08683	35935_at	1.probe_set_to_gc	GC22M049354	CPT1B
Y08683	35935_at	1.probe_set_to_gc	GC22M049354	CPT1B
Y08683	35936_g_at	1.probe_set_to_gc	GC22M049364	CHKB
Y08683	35936_g_at	1.probe_set_to_gc	GC22M049364	CHKB
Y08683	35936_g_at	1.probe_set_to_gc	GC22M049364	CHKB
Y08683	35936_g_at	1.probe_set_to_gc	GC22M049354	CPT1B
Y08683	35936_g_at	1.probe_set_to_gc	GC22M049354	CPT1B
Y08683	35936_g_at	1.probe_set_to_gc	GC22M049354	CPT1B

BLAT
GeneLoc

LocusLink_hit	Ensembl_hit	gc_id	gene_symbol
-	+	GC22M049355	CHKB-CPT1B

Genomic location based data

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Table 'ucsc_hg18_v4.all_est' doesn't exist

Genomic Location