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Version: v1.3
Release:
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GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
de-novo genes. (More about GeneTide.)

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GeneTide Query Results for U95 Probe set 31556_at which was created from Genbank accession X61072

Gene Association Results Summary for X61072

GC Gene	GC ID	UniGene	DoTS	AceView	GeneAnnot	BGL	Co	Uq	Score	Rank
TRA@	GC14P021160	+	-	-	+	+	0.60	0.34	0.49	1
TRDC	GC14P022001	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ55	GC14P022021	-	-	-	+	+	0.40	0.01	0.28	2
TRDJ4	GC14P021994	-	-	-	+	+	0.40	0.01	0.28	2
TRAV21	GC14P021590	-	-	-	+	+	0.40	0.01	0.28	2
TRAV33	GC14P021727	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ40	GC14P022038	-	-	-	+	+	0.40	0.01	0.28	2
TRDD2	GC14P021978	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ58	GC14P022018	-	-	-	+	+	0.40	0.01	0.28	2
TRAV28	GC14P021692	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ35	GC14P022045	-	-	-	+	+	0.40	0.01	0.28	2
TRAV8-7	GC14P021670	-	-	-	+	+	0.40	0.01	0.28	2
TRAV30	GC14P021706	-	-	-	+	+	0.40	0.01	0.28	2
TRAV26-1	GC14P021661	-	-	-	+	+	0.40	0.01	0.28	2
TRAV20	GC14P021578	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ50	GC14P022027	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ42	GC14P022036	-	-	-	+	+	0.40	0.01	0.28	2
TRDJ1	GC14P021988	-	-	-	+	+	0.40	0.01	0.28	2
TRAV35	GC14P021759	-	-	-	+	+	0.40	0.01	0.28	2
TRAV39	GC14P021841	-	-	-	+	+	0.40	0.01	0.28	2
TRAV38-2DV8	GC14P021818	-	-	-	+	+	0.40	0.01	0.28	2
TRAV34	GC14P021745	-	-	-	+	+	0.40	0.01	0.28	2
TRAV19	GC14P021545	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ54	GC14P022022	-	-	-	+	+	0.40	0.01	0.28	2
TRAV24	GC14P021643	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ51	GC14P022026	-	-	-	+	+	0.40	0.01	0.28	2
TRDD1	GC14P021979	-	-	-	+	+	0.40	0.01	0.28	2
TRDV2	GC14P021182	-	-	-	+	+	0.40	0.01	0.28	2
ENSG00000166056	GC14P021635	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ61	GC14P022014	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ53	GC14P022023	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ43	GC14P022035	-	-	-	+	+	0.40	0.01	0.28	2
TRAV23DV6	GC14P021624	-	-	-	+	+	0.40	0.01	0.28	2
TRAV25	GC14P021650	-	-	-	+	+	0.40	0.01	0.28	2
TRAV37	GC14P021803	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ39	GC14P022040	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ47	GC14P022031	-	-	-	+	+	0.40	0.01	0.28	2
TRDJ2	GC14P021995	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ52	GC14P022025	-	-	-	+	+	0.40	0.01	0.28	2
TRDJ3	GC14P021997	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ41	GC14P022037	-	-	-	+	+	0.40	0.01	0.28	2
TRAV38-1	GC14P021809	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ46	GC14P022032	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ60	GC14P022016	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ32	GC14P022049	-	-	-	+	+	0.40	0.01	0.28	2
TRAV22	GC14P021608	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ33	GC14P022048	-	-	-	+	+	0.40	0.01	0.28	2
TRDD3	GC14P021987	-	-	-	+	+	0.40	0.01	0.28	2
TRAV29DV5	GC14P021701	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ57	GC14P022019	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ38	GC14P022041	-	-	-	+	+	0.40	0.01	0.28	2
TRAV32	GC14P021723	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ59	GC14P022017	-	-	-	+	+	0.40	0.01	0.28	2
TRAV36DV7	GC14P021764	-	-	-	+	+	0.40	0.01	0.28	2
TRAV26-2	GC14P021740	-	-	-	+	+	0.40	0.01	0.28	2
TRAV16	GC14P021530	-	-	-	+	+	0.40	0.01	0.28	2
TRAV31	GC14P021715	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ49	GC14P022028	-	-	-	+	+	0.40	0.01	0.28	2
TRAV41	GC14P021858	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ48	GC14P022029	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ37	GC14P022042	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ34	GC14P022046	-	-	-	+	+	0.40	0.01	0.28	2
TRAV18	GC14P021541	-	-	-	+	+	0.40	0.01	0.28	2
TRAV17	GC14P021535	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ56	GC14P022020	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ45	GC14P022033	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ44	GC14P022034	-	-	-	+	+	0.40	0.01	0.28	2
TRAV27	GC14P021685	-	-	-	+	+	0.40	0.01	0.28	2
TRAJ36	GC14P022043	-	-	-	+	+	0.40	0.01	0.28	2
ENSG00000092217	GC14P021546	-	-	-	+	+	0.40	0.01	0.28	2
TRAV40	GC14P021852	-	-	-	+	+	0.40	0.01	0.28	2
TRDV1	GC14P021634	-	-	-	+	+	0.40	0.01	0.28	2
TRD@	GC14P021963	-	-	-	+	+	0.40	0.01	0.28	2

GeneTide Query Results for the mRNA X61072

General links

Similar transcripts	FASTA	UCSC Genome Browser

Validation Level

Validated by

RepeatMasker

Validation Score

UniGene	DoTS	AceView
+	-	-

---

2 - Medium

Resources Annotation

Resource

Data

UniGene

unigene_id	locuslink_id	gc_id	gene_symbol
Hs.74647	6955	GC14P021160	TRA@

DoTs

---

AceView

---

GeneAnnot

gb_id	probe_set	resource	gc_id	gene_symbol
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021541	TRAV18
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022042	TRAJ37
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022041	TRAJ38
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021182	TRDV2
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022040	TRAJ39
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021997	TRDJ3
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021963	TRD@
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021979	TRDD1
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021858	TRAV41
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021978	TRDD2
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022001	TRDC
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022019	TRAJ57
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021852	TRAV40
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022018	TRAJ58
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021818	TRAV38-2DV8
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022017	TRAJ59
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022016	TRAJ60
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022014	TRAJ61
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021759	TRAV35
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021685	TRAV27
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021578	TRAV20
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021643	TRAV24
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021715	TRAV31
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021535	TRAV17
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021608	TRAV22
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021745	TRAV34
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021670	TRAV8-7
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021635	ENSG00000166056
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021740	TRAV26-2
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021530	TRAV16
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022049	TRAJ32
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021634	TRDV1
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021701	TRAV29DV5
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022048	TRAJ33
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021706	TRAV30
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022046	TRAJ34
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022045	TRAJ35
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022043	TRAJ36
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022038	TRAJ40
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021995	TRDJ2
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022037	TRAJ41
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021994	TRDJ4
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022036	TRAJ42
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021160	TRA@
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022035	TRAJ43
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022034	TRAJ44
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022033	TRAJ45
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022032	TRAJ46
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022031	TRAJ47
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021841	TRAV39
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021809	TRAV38-1
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021590	TRAV21
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021661	TRAV26-1
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021803	TRAV37
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021624	TRAV23DV6
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021988	TRDJ1
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021987	TRDD3
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022029	TRAJ48
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022028	TRAJ49
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022027	TRAJ50
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022026	TRAJ51
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022025	TRAJ52
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022023	TRAJ53
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022022	TRAJ54
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022021	TRAJ55
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P022020	TRAJ56
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021692	TRAV28
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021764	TRAV36DV7
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021727	TRAV33
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021546	ENSG00000092217
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021723	TRAV32
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021650	TRAV25
X61072	31556_at	2.probe_set_to_gc_via_geneloc	GC14P021545	TRAV19

BLAT
GeneLoc

LocusLink_hit	Ensembl_hit	gc_id	gene_symbol
-	+	GC14P021818	TRAV38-2DV8
-	+	GC14P021535	TRAV17
-	+	GC14P021841	TRAV39
-	+	GC14P021530	TRAV16
-	+	GC14P021723	TRAV32
-	+	GC14P022045	TRAJ35
-	+	GC14P021852	TRAV40
-	+	GC14P022034	TRAJ44
-	+	GC14P021858	TRAV41
-	+	GC14P021740	TRAV26-2
-	+	GC14P022001	TRDC
-	+	GC14P021988	TRDJ1
-	+	GC14P021650	TRAV25
-	+	GC14P021803	TRAV37
-	+	GC14P021715	TRAV31
-	+	GC14P022033	TRAJ45
+	-	GC14P021546	ENSG00000092217
-	+	GC14P021701	TRAV29DV5
-	+	GC14P022049	TRAJ32
-	+	GC14P021160	TRA@
-	+	GC14P022031	TRAJ47
-	+	GC14P022046	TRAJ34
-	+	GC14P022019	TRAJ57
-	+	GC14P022016	TRAJ60
-	+	GC14P021182	TRDV2
-	+	GC14P022037	TRAJ41
-	+	GC14P022014	TRAJ61
-	+	GC14P022042	TRAJ37
-	+	GC14P021578	TRAV20
-	+	GC14P021608	TRAV22
+	-	GC14P021635	ENSG00000166056
-	+	GC14P022032	TRAJ46
-	+	GC14P022017	TRAJ59
-	+	GC14P022018	TRAJ58
-	+	GC14P021745	TRAV34
-	+	GC14P021727	TRAV33
-	+	GC14P022048	TRAJ33
-	+	GC14P022038	TRAJ40
-	+	GC14P021995	TRDJ2
-	+	GC14P021624	TRAV23DV6
-	+	GC14P021634	TRDV1
-	+	GC14P021987	TRDD3
-	+	GC14P021963	TRD@
-	+	GC14P021759	TRAV35
-	+	GC14P022043	TRAJ36
-	+	GC14P022035	TRAJ43
-	+	GC14P021706	TRAV30
-	+	GC14P021643	TRAV24
-	+	GC14P021545	TRAV19
-	+	GC14P021670	TRAV8-7
-	+	GC14P022041	TRAJ38
-	+	GC14P021994	TRDJ4
-	+	GC14P022020	TRAJ56
-	+	GC14P021541	TRAV18
-	+	GC14P021685	TRAV27
-	+	GC14P022022	TRAJ54
-	+	GC14P022025	TRAJ52
-	+	GC14P022040	TRAJ39
-	+	GC14P021590	TRAV21
-	+	GC14P021764	TRAV36DV7
-	+	GC14P021692	TRAV28
-	+	GC14P022028	TRAJ49
-	+	GC14P022036	TRAJ42
-	+	GC14P021978	TRDD2
-	+	GC14P022029	TRAJ48
-	+	GC14P021809	TRAV38-1
-	+	GC14P022021	TRAJ55
-	+	GC14P022027	TRAJ50
-	+	GC14P021979	TRDD1
-	+	GC14P021997	TRDJ3
-	+	GC14P022026	TRAJ51
-	+	GC14P021661	TRAV26-1
-	+	GC14P022023	TRAJ53

Genomic location based data

Error: can't execute SQL query:

Table 'ucsc_hg18_v4.all_est' doesn't exist

Genomic Location