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Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
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GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
de-novo genes. (More about GeneTide.)

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GeneTide Query Results for U95 Probe set 31311_at which was created from Genbank accession X61070

Gene Association Results Summary for X61070

GC Gene	GC ID	UniGene	DoTS	AceView	GeneAnnot	BGL	Co	Uq	Score	Rank
TRDC	GC14P022001	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ22	GC14P022061	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ55	GC14P022021	-	-	-	+	+	0.40	0.01	0.28	1
TRDJ4	GC14P021994	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ6	GC14P022079	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ40	GC14P022038	-	-	-	+	+	0.40	0.01	0.28	1
TRDD2	GC14P021978	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ58	GC14P022018	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ35	GC14P022045	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ50	GC14P022027	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ12	GC14P022072	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ42	GC14P022036	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ31	GC14P022050	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ24	GC14P022059	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ19	GC14P022064	-	-	-	+	+	0.40	0.01	0.28	1
TRDJ1	GC14P021988	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ25	GC14P022058	-	-	-	+	+	0.40	0.01	0.28	1
TRAV39	GC14P021841	-	-	-	+	+	0.40	0.01	0.28	1
TRAV38-2DV8	GC14P021818	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ54	GC14P022022	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ51	GC14P022026	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ5	GC14P022080	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ7	GC14P022078	-	-	-	+	+	0.40	0.01	0.28	1
TRDD1	GC14P021979	-	-	-	+	+	0.40	0.01	0.28	1
TRDV2	GC14P021182	-	-	-	+	+	0.40	0.01	0.28	1
ENSG00000166056	GC14P021635	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ61	GC14P022014	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ53	GC14P022023	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ43	GC14P022035	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ9	GC14P022076	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ8	GC14P022077	-	-	-	+	+	0.40	0.01	0.28	1
TRAV37	GC14P021803	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ39	GC14P022040	-	-	-	+	+	0.40	0.01	0.28	1
TRA@	GC14P021160	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ47	GC14P022031	-	-	-	+	+	0.40	0.01	0.28	1
TRDJ2	GC14P021995	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ52	GC14P022025	-	-	-	+	+	0.40	0.01	0.28	1
TRDJ3	GC14P021997	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ41	GC14P022037	-	-	-	+	+	0.40	0.01	0.28	1
TRAV38-1	GC14P021809	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ3	GC14P022082	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ46	GC14P022032	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ15	GC14P022068	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ16	GC14P022067	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ60	GC14P022016	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ32	GC14P022049	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ11	GC14P022073	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ17	GC14P022066	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ33	GC14P022048	-	-	-	+	+	0.40	0.01	0.28	1
TRDD3	GC14P021987	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ29	GC14P022052	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ1	GC14P022084	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ23	GC14P022060	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ2	GC14P022083	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ57	GC14P022019	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ38	GC14P022041	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ27	GC14P022055	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ14	GC14P022069	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ59	GC14P022017	-	-	-	+	+	0.40	0.01	0.28	1
TRAV36DV7	GC14P021764	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ30	GC14P022051	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ49	GC14P022028	-	-	-	+	+	0.40	0.01	0.28	1
TRAV41	GC14P021858	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ13	GC14P022070	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ48	GC14P022029	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ34	GC14P022046	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ28	GC14P022054	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ21	GC14P022062	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ37	GC14P022042	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ10	GC14P022075	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ20	GC14P022063	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ18	GC14P022065	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ26	GC14P022057	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ56	GC14P022020	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ45	GC14P022033	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ44	GC14P022034	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ4	GC14P022081	-	-	-	+	+	0.40	0.01	0.28	1
TRAJ36	GC14P022043	-	-	-	+	+	0.40	0.01	0.28	1
TRAV40	GC14P021852	-	-	-	+	+	0.40	0.01	0.28	1
TRD@	GC14P021963	-	-	-	+	+	0.40	0.01	0.28	1

GeneTide Query Results for the mRNA X61070

General links

Similar transcripts	FASTA	UCSC Genome Browser

Validation Level

Validated by

RepeatMasker

Validation Score

UniGene	DoTS	AceView
+	+	-

repeat_name	repeat_class	repeat_family
MER3	DNA	MER1

2 - Medium

Resources Annotation

Resource

Data

UniGene

unigene_id	locuslink_id	gc_id	gene_symbol
Hs.121492

DoTs

dots_id	locuslink_id	gc_id	gene_symbol
DT.40124766

AceView

---

GeneAnnot

gb_id	probe_set	resource	gc_id	gene_symbol
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022040	TRAJ39
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021963	TRD@
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021818	TRAV38-2DV8
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022019	TRAJ57
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022018	TRAJ58
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022017	TRAJ59
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022016	TRAJ60
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022014	TRAJ61
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022038	TRAJ40
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022037	TRAJ41
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022036	TRAJ42
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021160	TRA@
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022035	TRAJ43
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022084	TRAJ1
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022083	TRAJ2
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022082	TRAJ3
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022034	TRAJ44
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022081	TRAJ4
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022080	TRAJ5
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021858	TRAV41
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022001	TRDC
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021852	TRAV40
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021635	ENSG00000166056
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022033	TRAJ45
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022032	TRAJ46
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022079	TRAJ6
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022031	TRAJ47
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022078	TRAJ7
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022077	TRAJ8
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021809	TRAV38-1
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022076	TRAJ9
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022075	TRAJ10
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021803	TRAV37
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022073	TRAJ11
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021997	TRDJ3
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022072	TRAJ12
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021995	TRDJ2
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022070	TRAJ13
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021994	TRDJ4
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022029	TRAJ48
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021841	TRAV39
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022028	TRAJ49
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022069	TRAJ14
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022068	TRAJ15
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022067	TRAJ16
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022066	TRAJ17
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022065	TRAJ18
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022027	TRAJ50
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022064	TRAJ19
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021988	TRDJ1
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022063	TRAJ20
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022026	TRAJ51
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021987	TRDD3
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022062	TRAJ21
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022061	TRAJ22
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022060	TRAJ23
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022025	TRAJ52
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021764	TRAV36DV7
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022023	TRAJ53
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022022	TRAJ54
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022021	TRAJ55
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022020	TRAJ56
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022059	TRAJ24
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022058	TRAJ25
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021182	TRDV2
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022057	TRAJ26
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022055	TRAJ27
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022054	TRAJ28
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021979	TRDD1
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P021978	TRDD2
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022052	TRAJ29
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022051	TRAJ30
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022050	TRAJ31
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022049	TRAJ32
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022048	TRAJ33
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022046	TRAJ34
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022045	TRAJ35
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022043	TRAJ36
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022042	TRAJ37
X61070	31311_at	2.probe_set_to_gc_via_geneloc	GC14P022041	TRAJ38

BLAT
GeneLoc

LocusLink_hit	Ensembl_hit	gc_id	gene_symbol
-	+	GC14P021818	TRAV38-2DV8
-	+	GC14P021841	TRAV39
-	+	GC14P022060	TRAJ23
-	+	GC14P022045	TRAJ35
-	+	GC14P021852	TRAV40
-	+	GC14P022034	TRAJ44
-	+	GC14P021858	TRAV41
-	+	GC14P022077	TRAJ8
-	+	GC14P022075	TRAJ10
-	+	GC14P022001	TRDC
-	+	GC14P021988	TRDJ1
-	+	GC14P021803	TRAV37
-	+	GC14P022080	TRAJ5
-	+	GC14P022068	TRAJ15
-	+	GC14P022061	TRAJ22
-	+	GC14P022083	TRAJ2
-	+	GC14P022033	TRAJ45
-	+	GC14P022082	TRAJ3
-	+	GC14P022049	TRAJ32
-	+	GC14P021160	TRA@
-	+	GC14P022031	TRAJ47
-	+	GC14P022046	TRAJ34
-	+	GC14P022019	TRAJ57
-	+	GC14P022016	TRAJ60
-	+	GC14P021182	TRDV2
-	+	GC14P022037	TRAJ41
-	+	GC14P022014	TRAJ61
-	+	GC14P022072	TRAJ12
-	+	GC14P022057	TRAJ26
-	+	GC14P022062	TRAJ21
-	+	GC14P022059	TRAJ24
-	+	GC14P022063	TRAJ20
-	+	GC14P022042	TRAJ37
-	+	GC14P022069	TRAJ14
-	+	GC14P022064	TRAJ19
-	+	GC14P022073	TRAJ11
+	-	GC14P021635	ENSG00000166056
-	+	GC14P022032	TRAJ46
-	+	GC14P022017	TRAJ59
-	+	GC14P022018	TRAJ58
-	+	GC14P022048	TRAJ33
-	+	GC14P022038	TRAJ40
-	+	GC14P021995	TRDJ2
-	+	GC14P022051	TRAJ30
-	+	GC14P022050	TRAJ31
-	+	GC14P021987	TRDD3
-	+	GC14P021963	TRD@
-	+	GC14P022035	TRAJ43
-	+	GC14P022043	TRAJ36
-	+	GC14P022058	TRAJ25
-	+	GC14P022078	TRAJ7
-	+	GC14P022041	TRAJ38
-	+	GC14P021994	TRDJ4
-	+	GC14P022065	TRAJ18
-	+	GC14P022084	TRAJ1
-	+	GC14P022020	TRAJ56
-	+	GC14P022081	TRAJ4
-	+	GC14P022070	TRAJ13
-	+	GC14P022022	TRAJ54
-	+	GC14P022067	TRAJ16
-	+	GC14P022025	TRAJ52
-	+	GC14P022040	TRAJ39
-	+	GC14P022076	TRAJ9
-	+	GC14P021764	TRAV36DV7
-	+	GC14P022028	TRAJ49
-	+	GC14P022036	TRAJ42
-	+	GC14P022055	TRAJ27
-	+	GC14P021978	TRDD2
-	+	GC14P022029	TRAJ48
-	+	GC14P022027	TRAJ50
-	+	GC14P022021	TRAJ55
-	+	GC14P021809	TRAV38-1
-	+	GC14P022052	TRAJ29
-	+	GC14P021979	TRDD1
-	+	GC14P022079	TRAJ6
-	+	GC14P022026	TRAJ51
-	+	GC14P021997	TRDJ3
-	+	GC14P022054	TRAJ28
-	+	GC14P022066	TRAJ17
-	+	GC14P022023	TRAJ53

Genomic location based data

Error: can't execute SQL query:

Table 'ucsc_hg18_v4.all_est' doesn't exist

Genomic Location