an academic website of the in association with
Home Overview Multiple Query EGC List Sources Publications GeneTide Team
 


What's New

Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5


Contact us Click here to email us


 GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
 de-novo genes. (
More about GeneTide.)

Search GeneTide


GeneTide Query Results for U133 Probe set 211057_at which was created from Genbank accession BC006374


Gene Association Results Summary for BC006374 [help]

GC Gene GC ID UniGene DoTS AceView GeneAnnot BGL Co Uq Score Rank
ROR1
GC01P063951
-
-
+
-
-
0.20
1.00
0.72
1


Top

GeneTide Query Results for the mRNA BC006374 [help]

  General links [help]

Similar transcripts

FASTA

UCSC Genome Browser

Top

  Validation Level [help]

Validated by RepeatMasker Validation Score
UniGene DoTS AceView
-
+
+
repeat_name
repeat_class
repeat_family
GC
rich
Low
FLAM
C
SINE

2 - Medium

Top

  Resources Annotation [help]

Resource

Data

UniGene

---

DoTs

dots_id
locuslink_id
gc_id
gene_symbol
DT.95253870



AceView

av_symbol
locuslink_id
gc_id
gene_symbol
ROR1
4919
GC01P063951
ROR1

GeneAnnot

---

BLAT
GeneLoc

---

Top

  Genomic location based data [help]

Genomic Location

Chr Str
orientation
chrom_start
chrom_end
cdna_start
cdna_end
length
matches
chr1
+
unknown
64239696
64609052
8
2293
2285
2116

Gene Territory

Str
start
end
gc_id
gene_symbol
+
64012281
64419769
GC01P063951
ROR1

Splice Site
Known

YES

Repeat Masker

chrom
Str
start
end
repName
repClass
repFamily
1
+
64380675
64381629
FLAM
C
SINE
1
+
64012284
64012767
GC
rich
Low


Current team:

Alexandra Sirota, Asaf Madi, Tsippi Iny Stein, Marilyn Safran (Head of the GeneCards project) and Doron Lancet (principal investigator).

Past team:

Maxim Shklar (founder), Shany Ron, Ohad Greenshpan.