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Weizmann Institute of Science

Version: v1.3
Release:
24 April 2007
Synchronized with: GeneCards v2.36
GeneLoc v2.36
GeneAnnot v1.5


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 GeneTide is an automated system for human transcripts (mRNA & ESTs) annotation and elucidation of
 de-novo genes. (
More about GeneTide.)

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GeneTide Query Results for U133 Probe set 160020_at which was created from Genbank accession Z48481


Gene Association Results Summary for Z48481 [help]

GC Gene GC ID UniGene DoTS AceView GeneAnnot BGL Co Uq Score Rank
MMP14
GC14P022375
+
+
+
+
+
1.00
1.00
1.00
1


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GeneTide Query Results for the mRNA Z48481 [help]

  General links [help]

Similar transcripts

FASTA

UCSC Genome Browser

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  Validation Level [help]

Validated by RepeatMasker Validation Score
UniGene DoTS AceView
+
+
+
repeat_name
repeat_class
repeat_family
AT
rich
Low

3 - High

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  Resources Annotation [help]

Resource

Data

UniGene

unigene_id
locuslink_id
gc_id
gene_symbol
Hs.2399
4323
GC14P022375
MMP14

DoTs

dots_id
locuslink_id
gc_id
gene_symbol
DT.40213418
4323
GC14P022375
MMP14

AceView

av_symbol
locuslink_id
gc_id
gene_symbol
MMP14
4323
GC14P022375
MMP14

GeneAnnot

gb_id
probe_set
resource
gc_id
gene_symbol
Z48481
160020_at
1.probe_set_to_gc
GC14P022375
MMP14

BLAT
GeneLoc

LocusLink_hit
Ensembl_hit
gc_id
gene_symbol
+
+
GC14P022375
MMP14

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  Genomic location based data [help]

Genomic Location

Chr Str
orientation
chrom_start
chrom_end
cdna_start
cdna_end
length
matches
chr14
+
unknown
23305913
23316803
0
3417
3417
3389

Gene Territory

Str
start
end
gc_id
gene_symbol
+
22375633
22386643
GC14P022375
MMP14

Splice Site
Known

YES

Repeat Masker

chrom
Str
start
end
repName
repClass
repFamily
14
+
22384756
22386642
AT
rich
Low


Current team:

Alexandra Sirota, Asaf Madi, Tsippi Iny Stein, Marilyn Safran (Head of the GeneCards project) and Doron Lancet (principal investigator).

Past team:

Maxim Shklar (founder), Shany Ron, Ohad Greenshpan.