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  Chromosome X

   GeneLoc map region (47,687,225 - 51,863,892 bp) around gene/marker "CLCN5"

   Explanation:
   CLCN5 is located at 49,687,225-49,863,892 bp

    [ GeneLoc Home Page ]


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#
Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
147695352 47696186 - LOC441493
Exon structure
Hs.496083 441493
Uncharacterized LOC441493 (est)
247698848 47698874 + PIR57381
Exon structure




347700362 47701109 - RPL7P57
Exon structure

643507 ENSG00000224401 ribosomal protein L7 pseudogene 57
447696301 47861960 + ZNF81
Exon structure
Hs.114246 347344 ENSG00000197779 zinc finger protein 81
547783117 47785023 + GC0XP047785



647835694 47835862 - GC0XM047839



747836020 47836049 - PIR34840
Exon structure




847834250 47863394 - ZNF182
Exon structure
Hs.189690 7569 ENSG00000147118 zinc finger protein 182
947863734 47869130 + SPACA5
Exon structure

389852 ENSG00000171489 sperm acrosome associated 5
1047875919 47875946 + PIR35699
Exon structure




1147842756 47931025 - ZNF630
Exon structure
Hs.650883 57232 ENSG00000221994 zinc finger protein 630
1247915699 47925971 + ZNF630-AS1
Exon structure

100874120 ENSG00000238068 ZNF630 antisense RNA 1
1347917566 47931025 - GC0XM047919



1447941136 47941239 + ENSG00000238473
Exon structure


ENSG00000238473
1547967365 47980073 + SSX6
Exon structure
Hs.511998 280657 ENSG00000171483 synovial sarcoma, X breakpoint 6 (pseudogene)
1647975310 47975342 + PIR56028
Exon structure




1747990039 47991995 + SPACA5B
Exon structure
Hs.319319; Hs.712503 729201 ENSG00000171478 sperm acrosome associated 5B
1847995036 47995537 - ENSG00000230241
Exon structure


ENSG00000230241
1948013395 48013502 - GC0XM048041



2048013408 48013502 - RNU6-707P
Exon structure

hugo2931 ENSG00000201517 RNA, U6 small nuclear 707, pseudogene
2148012421 48015399 - LOC643554
Exon structure

643554

2248013296 48015369 - ENSG00000233139
Exon structure


ENSG00000233139
2348015795 48025778 + SSXP3
Exon structure

326341 ENSG00000225198 SSX family pseudogene 3
2448037167 48037459 - ENSG00000238032
Exon structure


ENSG00000238032
2548045656 48056199 - SSX5
Exon structure
Hs.166198 6758 ENSG00000165583 synovial sarcoma, X breakpoint 5
2648056657 48058867 + LOC100420083
Exon structure

100420083 ENSG00000234780
2748065693 48065809 + RNA5SP503
Exon structure

100873554 ENSG00000252856 RNA, 5S ribosomal pseudogene 503
2848072226 48077445 + ENSG00000204368
Exon structure


ENSG00000204368
2948078053 48078818 - GC0XM048080



3048088268 48088394 - ENSG00000231568
Exon structure


ENSG00000231568
3148104314 48105181 + LOC100420084
Exon structure

100420084 ENSG00000229662
3248114752 48126879 + SSX1
Exon structure
Hs.434142 6756 ENSG00000126752 synovial sarcoma, X breakpoint 1
3348134339 48134482 - ENSG00000232813
Exon structure


ENSG00000232813
3448136138 48137013 - LOC100420551
Exon structure

100420551 ENSG00000241207
3548136027 48138786 + SSXP8
Exon structure

326585
SSX family pseudogene 8
3648138825 48141573 + LOC791091
Exon structure

791091 ENSG00000237345
3748154885 48165732 - SSX9
Exon structure

280660 ENSG00000204648 synovial sarcoma, X breakpoint 9
3848166204 48169125 + LOC791092
Exon structure

791092 ENSG00000234391
3948181628 48187807 + SSXP9
Exon structure

326586 ENSG00000227302 SSX family pseudogene 9
4048193110 48193874 - ENSG00000230100
Exon structure


ENSG00000230100
4148196334 48196604 - ENSG00000270747
Exon structure


ENSG00000270747
4248205863 48216142 - SSX3
Exon structure
Hs.558445 10214 ENSG00000165584 synovial sarcoma, X breakpoint 3
4348216531 48219894 + LOC791093
Exon structure

791093 ENSG00000225055
4448231338 48231528 + ENSG00000234448
Exon structure


ENSG00000234448
4548238783 48242594 - LOC791094
Exon structure

791094 ENSG00000231603
4648242863 48252785 + SSX4
Exon structure

6759 ENSG00000204645 synovial sarcoma, X breakpoint 4
4748261524 48271344 - SSX4B
Exon structure
Hs.558402; Hs.648298 548313 ENSG00000198946 synovial sarcoma, X breakpoint 4B
4848271718 48275360 + LOC791095
Exon structure

791095 ENSG00000229620
4948281727 48281853 - ENSG00000231489
Exon structure


ENSG00000231489
5048291580 48291653 + SSXP6
Exon structure

326587
SSX family pseudogene 6
5148291580 48299998 + ENSG00000235350
Exon structure


ENSG00000235350
5248299898 48301356 + SSXP7
Exon structure

326590
SSX family pseudogene 7
5348304640 48307281 - LOC791096
Exon structure

791096 ENSG00000226971
5448316920 48328644 - SLC38A5
Exon structure
Hs.195155 92745 ENSG00000017483 solute carrier family 38, member 5
5548323105 48324489 - GC0XM048325



5648334541 48344752 + FTSJ1
Exon structure
Hs.23170 24140 ENSG00000068438 FtsJ RNA methyltransferase homolog 1 (E. coli)
5748364911 48367226 - ENSG00000224292
Exon structure


ENSG00000224292
5848367350 48379202 + PORCN
Exon structure
Hs.386453 64840 ENSG00000102312 porcupine homolog (Drosophila)
5948379546 48387104 + EBP
Exon structure
Hs.30619 10682 ENSG00000147155 emopamil binding protein (sterol isomerase)
6048397845 48420997 + TBC1D25
Exon structure
Hs.694353 4943 ENSG00000068354 TBC1 domain family, member 25
6148420090 48420189 - ENSG00000239017
Exon structure


ENSG00000239017
6248420512 48420630 - GC0XM048425



6348420469 48420797 + GC0XP048426



6448420469 48420797 + GC0XP048425



6548431482 48433275 - ENSG00000204620
Exon structure


ENSG00000204620
6648432741 48439553 + RBM3
Exon structure
Hs.301404 5935 ENSG00000102317 RNA binding motif (RNP1, RRM) protein 3
6748438162 48439545 - ENSG00000228343
Exon structure


ENSG00000228343
6848441481 48441744 - MRPL32P1
Exon structure

359741 ENSG00000220125 mitochondrial ribosomal protein L32 pseudogene 1
6948448430 48463582 + WDR13
Exon structure
Hs.521973 64743 ENSG00000101940 WD repeat domain 13
7048494553 48495547 + VN1R110P
Exon structure

100312803 ENSG00000231725 vomeronasal 1 receptor 110 pseudogene
7148518657 48518685 + PIR50087
Exon structure




7248518831 48518861 + PIR44416
Exon structure




7348521666 48521938 + GC0XP048523



7448534985 48549818 + WAS
Exon structure
Hs.2157 7454 ENSG00000015285 Wiskott-Aldrich syndrome
7548553945 48567407 + SUV39H1
Exon structure
Hs.522639 6839 ENSG00000101945 suppressor of variegation 3-9 homolog 1 (Drosophila)
7648557354 48595570 - ENSG00000232828
Exon structure


ENSG00000232828
7748582859 48582966 - GC0XM048585



7848582860 48582966 - RNU6-1056P
Exon structure

hugo2015 ENSG00000206723 RNA, U6 small nuclear 1056, pseudogene
7948593889 48593919 + GC0XP048595



8048593889 48593919 + PIR41370
Exon structure




8148607055 48607082 - PIR45163
Exon structure




8248620154 48632064 + GLOD5
Exon structure
Hs.437539 392465 ENSG00000171433 glyoxalase domain containing 5
8348634408 48635385 - LOC100420869
Exon structure

100420869 ENSG00000233585
8448635379 48635486 - GC0XM048641



8548635380 48635486 - RNU6-29P
Exon structure

hugo2505 ENSG00000207367 RNA, U6 small nuclear 29, pseudogene
8648644962 48652718 + GATA1
Exon structure
Hs.765 2623 ENSG00000102145 GATA binding protein 1 (globin transcription factor 1)
8748659784 48683392 + HDAC6
Exon structure
Hs.6764 10013 ENSG00000094631 histone deacetylase 6
8848681966 48681992 + PIR34696
Exon structure




8948687283 48688548 + ERAS
Exon structure
Hs.447330 3266 ENSG00000187682 ES cell expressed Ras
9048689504 48694035 - PCSK1N
Exon structure
Hs.522640 27344 ENSG00000102109 proprotein convertase subtilisin/kexin type 1 inhibitor
9148750730 48755426 - TIMM17B
Exon structure
Hs.30570 10245 ENSG00000126768 translocase of inner mitochondrial membrane 17 homolog B (yeast)
9248755195 48760422 + PQBP1
Exon structure
Hs.534384 10084 ENSG00000102103 polyglutamine binding protein 1
9348761820 48761850 - GC0XM048763



9448761820 48761850 - PIR49778
Exon structure




9548760459 48769235 - SLC35A2
Exon structure
Hs.21899 7355 ENSG00000102100 solute carrier family 35 (UDP-galactose transporter), member A2
9648770459 48776413 - PIM2
Exon structure
Hs.727148 11040 ENSG00000102096 pim-2 oncogene
9748779301 48815648 - OTUD5
Exon structure
Hs.496098 55593 ENSG00000068308 OTU domain containing 5
9848797263 48798079 + ENSG00000184596
Exon structure


ENSG00000184596
9948816440 48816543 - RNU6-722P
Exon structure

hugo2947 ENSG00000223309 RNA, U6 small nuclear 722, pseudogene
10048818639 48828251 - KCND1
Exon structure
Hs.55276 3750 ENSG00000102057 potassium voltage-gated channel, Shal-related subfamily, member 1
10148823404 48823518 - GC0XM048827



10248823404 48823518 - GC0XM048828



10348830134 48858675 - GRIPAP1
Exon structure
Hs.109929 56850 ENSG00000068400 GRIP1 associated protein 1
10448863969 48864276 - RN7SL139P
Exon structure

hugo781 ENSG00000264065 RNA, 7SL, cytoplasmic 139, pseudogene
10548886242 48901012 - TFE3
Exon structure
Hs.730740 7030 ENSG00000068323 transcription factor binding to IGHM enhancer 3
10648911018 48911407 + GC0XP048914



10748911101 48927510 + CCDC120
Exon structure
Hs.522643 90060 ENSG00000147144 coiled-coil domain containing 120
10848928813 48931730 - PRAF2
Exon structure
Hs.29595 11230 ENSG00000243279 PRA1 domain family, member 2
10948929385 48937546 - ENSG00000250232
Exon structure


ENSG00000250232
11048939685 48939823 + GC0XP048942



11148939686 48939823 + RNU4-52P
Exon structure

hugo1897 ENSG00000206936 RNA, U4 small nuclear 52, pseudogene
11248929385 48958108 - WDR45
Exon structure
Hs.632807 11152 ENSG00000196998 WD repeat domain 45
11348969022 48980151 - GPKOW
Exon structure
Hs.503666 27238 ENSG00000068394 G patch domain and KOW motifs
11448997495 48997522 + PIR61093
Exon structure




11549004869 49012503 - GC0XM049006



11649008986 49009277 + RN7SL262P
Exon structure

hugo916 ENSG00000265033 RNA, 7SL, cytoplasmic 262, pseudogene
11749019061 49024822 + MAGIX
Exon structure
Hs.193170 79917 ENSG00000017621 MAGI family member, X-linked
11849021913 49022308 - GC0XM049023



11949028184 49031588 + PLP2
Exon structure
Hs.77422 5355 ENSG00000102007 proteolipid protein 2 (colonic epithelium-enriched)
12049031151 49042845 - PRICKLE3
Exon structure
Hs.732712 4007 ENSG00000012211 prickle homolog 3 (Drosophila)
12149044265 49056718 - SYP
Exon structure
Hs.632804 6855 ENSG00000102003 synaptophysin
12249055425 49058913 + SYP-AS1
Exon structure

100873921 ENSG00000237341 SYP antisense RNA 1
12349059702 49059788 - ENSG00000266813
Exon structure


ENSG00000266813
12449061523 49089833 - CACNA1F
Exon structure
Hs.632799 778 ENSG00000102001 calcium channel, voltage-dependent, L type, alpha 1F subunit
12549090262 49090999 - HSPB1P2
Exon structure

653364 ENSG00000230216 heat shock 27kDa protein 1 pseudogene 2
12649091927 49106987 + CCDC22
Exon structure
Hs.26333 28952 ENSG00000101997 coiled-coil domain containing 22
12749106897 49121288 - FOXP3
Exon structure
Hs.247700 50943 ENSG00000049768 forkhead box P3
12849121663 49123331 - GC0XM049123



12949129517 49132231 + ENSG00000270012
Exon structure


ENSG00000270012
13049126306 49157929 + PPP1R3F
Exon structure
Hs.433652 89801 ENSG00000049769 protein phosphatase 1, regulatory subunit 3F
13149155628 49157930 + GC0XP049157



13249159960 49159986 - PIR47304
Exon structure




13349160125 49176323 + GAGE10
Exon structure

643832 ENSG00000215274 G antigen 10
13449178516 49185866 + GAGE12J
Exon structure

729396 ENSG00000224659 G antigen 12J
13549183207 49183233 + PIR40119
Exon structure




13649188094 49195366 + GAGE13
Exon structure

645051 ENSG00000237597 G antigen 13
13749197607 49204923 + GAGE2E
Exon structure
Hs.695911 26749 ENSG00000205775 G antigen 2E
13849207116 49214420 + GAGE2D
Exon structure

729408 ENSG00000240257 G antigen 2D
13949216659 49223943 + GAGE12I
Exon structure

26748 ENSG00000241465 G antigen 12I
14049226171 49233491 + GAGE2C
Exon structure
Hs.460641 2574 ENSG00000236249 G antigen 2C
14149235708 49242997 + GAGE2B
Exon structure
Hs.714681 645037 ENSG00000231850 G antigen 2B
14249294472 49294588 + GAGE12B
Exon structure
Hs.632812 729428 ENSG00000236737 G antigen 12B
14349296780 49304144 + GAGE12C
Exon structure

729422 ENSG00000237671 G antigen 12C
14449306325 49313710 + GAGE12D
Exon structure
Hs.645554 100132399 ENSG00000227488 G antigen 12D
14549315892 49323252 + GAGE12E
Exon structure

729431 ENSG00000216649 G antigen 12E
14649325479 49332808 + GAGE12F
Exon structure
Hs.695912 100008586 ENSG00000236362 G antigen 12F
14749335003 49342360 + GAGE12G
Exon structure

645073 ENSG00000215269 G antigen 12G
14849344552 49351907 + GAGE12H
Exon structure
Hs.632813 729442 ENSG00000224902 G antigen 12H
14949354118 49361430 + GAGE2A
Exon structure
Hs.722100 729447 ENSG00000189064 G antigen 2A
15049363616 49373139 + GAGE1
Exon structure
Hs.278606 2543 ENSG00000205777 G antigen 1
15149396238 49397962 - VDAC1P2
Exon structure

10064 ENSG00000213856 voltage-dependent anion channel 1 pseudogene 2
15249428331 49433293 - SALL1P1
Exon structure

139163 ENSG00000227391 sal-like 1 (Drosophila) pseudogene 1
15349452053 49460596 - PAGE1
Exon structure
Hs.128231 8712 ENSG00000068985 P antigen family, member 1 (prostate associated)
15449593863 49598576 + PAGE4
Exon structure
Hs.441038 9506 ENSG00000101951 P antigen family, member 4 (prostate associated)
15549641327 49643959 - USP27X-AS1
Exon structure
Hs.408191 158572 ENSG00000234390 USP27X antisense RNA 1 (head to head)
15649645463 49645871 + GC0XP049651



15749645464 49645871 + GC0XP049652



15849644470 49647169 + USP27X
Exon structure
Hs.143587 389856 ENSG00000242013 ubiquitin specific peptidase 27, X-linked
15949676198 49676990 - LOC100422285
Exon structure

100422285 ENSG00000220132
16049709947 49710053 - RNU6-421P
Exon structure

hugo2633 ENSG00000201341 RNA, U6 small nuclear 421, pseudogene
16149709946 49710053 - GC0XM049712



16249763735 49763821 + GC0XP049766



16349767773 49767790 + GC0XP049832



16449767754 49767844 + MIR532
Exon structure

693124 ENSG00000207758 microRNA 532
16549767753 49767844 + GC0XP049823



16649768122 49768144 + GC0XP049820



16749768108 49768194 + GC0XP049816



16849768109 49768194 + MIR188
Exon structure

406964 ENSG00000207768 microRNA 188
16949771262 49771344 + ENSG00000265152
Exon structure


ENSG00000265152
17049773050 49773072 + GC0XP049814



17149773038 49773122 + GC0XP049818



17249773039 49773122 + MIR500A
Exon structure

574502 ENSG00000207785 microRNA 500a
17349773089 49773111 + GC0XP049824



17449773575 49773597 + GC0XP049813



17549773575 49773599 + GC0XP049815



17649773568 49773640 + GC0XP049831



17749773571 49773636 + GC0XP049827



17849773572 49773636 + MIR362
Exon structure

574030 ENSG00000208015 microRNA 362
17949774342 49774364 + GC0XP049829



18049774329 49774413 + GC0XP049825



18149774330 49774413 + MIR501
Exon structure

574503 ENSG00000211538 microRNA 501
18249775278 49775358 + GC0XP049828



18349775280 49775358 + MIR500B
Exon structure

100422911 ENSG00000239057 microRNA 500b
18449687225 49863892 + CLCN5
Exon structure
Hs.166486 1184 ENSG00000171365 chloride channel, voltage-sensitive 5
18549777863 49777885 + GC0XP049821



18649777844 49777940 + GC0XP049830



18749777848 49777945 + GC0XP049817



18849777849 49777945 + MIR660
Exon structure

724030 ENSG00000207970 microRNA 660
18949779220 49779241 + GC0XP049819



19049779205 49779291 + GC0XP049826



19149779206 49779291 + MIR502
Exon structure

574504 ENSG00000272080 microRNA 502
19249920714 49921244 + PYY3
Exon structure

644059 ENSG00000181977 peptide YY, 3 (pseudogene)
19349935841 49935941 - ENSG00000202495
Exon structure


ENSG00000202495
19449935842 49935941 - GC0XM049937



19549955406 49965664 - AKAP4
Exon structure
Hs.97633 8852 ENSG00000147081 A kinase (PRKA) anchor protein 4
19649967363 50028245 + GC0XP049976



19749969145 50028245 + GC0XP049977



19849969415 50028245 + GC0XP049978



19949967364 50094913 + CCNB3
Exon structure
Hs.740165; Hs.130310; Hs.722420; Hs.722421 85417 ENSG00000147082 cyclin B3
20050076117 50076144 - PIR58816
Exon structure




20150108408 50213737 - DGKK
Exon structure
Hs.631770 139189 ENSG00000204466 diacylglycerol kinase, kappa
20250331931 50333932 - GC0XM050333



20350388118 50388209 + ENSG00000265211
Exon structure


ENSG00000265211
20450392641 50392740 + RNU6-935P
Exon structure

hugo3173 ENSG00000222303 RNA, U6 small nuclear 935, pseudogene
20550334642 50557044 - GC0XM050336



20650334642 50557302 - SHROOM4
Exon structure
Hs.420541 57477 ENSG00000158352 shroom family member 4
20750648432 50648891 + H3F3AP5
Exon structure

347376 ENSG00000226881 H3 histone, family 3A, pseudogene 5
20850653735 50659641 + BMP15
Exon structure
Hs.532692 9210 ENSG00000130385 bone morphogenetic protein 15
20950661919 50674728 - HMGB1P15
Exon structure

644129 ENSG00000238190 high mobility group box 1 pseudogene 15
21050773422 50774369 - LOC100420318
Exon structure

100420318 ENSG00000227493
21150825664 50834074 + ENSG00000230926
Exon structure


ENSG00000230926
21250838690 50914232 - ENSG00000230317
Exon structure


ENSG00000230317
21350905696 50906509 + LOC100420331
Exon structure

100420331 ENSG00000237926
21450906566 50975444 - GC0XM050907



21551075083 51080377 + NUDT10
Exon structure
Hs.375178 170685 ENSG00000122824 nudix (nucleoside diphosphate linked moiety X)-type motif 10
21651095067 51095093 - PIR56688
Exon structure




21751099796 51139314 - ENSG00000229151
Exon structure


ENSG00000229151
21851116535 51156054 - GC0XM051118



21951138947 51139522 + LOC100419238
Exon structure

100419238

22051149767 51151690 + CXorf67
Exon structure
Hs.97053 340602 ENSG00000187690 chromosome X open reading frame 67
22151139363 51208513 + ENSG00000226530
Exon structure


ENSG00000226530
22251156102 51225253 + GC0XP051159



22351232863 51239459 - NUDT11
Exon structure
Hs.200016 55190 ENSG00000196368 nudix (nucleoside diphosphate linked moiety X)-type motif 11
22451244942 51253857 - ENSG00000234766
Exon structure


ENSG00000234766
22551252848 51252875 - PIR40404
Exon structure




22651261681 51270597 - GC0XM051263



22751360949 51361725 - CENPVP3
Exon structure

347549 ENSG00000224109 centromere protein V pseudogene 3
22851424145 51425485 - CENPVP2
Exon structure
Hs.187774 441495 ENSG00000227997 centromere protein V pseudogene 2
22951453887 51455227 + CENPVP1
Exon structure
Hs.730388 389857 ENSG00000223591 centromere protein V pseudogene 1
23051486481 51489328 + GSPT2
Exon structure
Hs.59523 23708 ENSG00000189369 G1 to S phase transition 2
23151546103 51645453 + MAGED1
Exon structure
Hs.5258 9500 ENSG00000179222 melanoma antigen family D, 1
23251599994 51601185 + LOC100631242
Exon structure

100631242

23351600064 51601162 + ENSG00000236576
Exon structure


ENSG00000236576
23451609010 51609037 + PIR39380
Exon structure




23551613802 51613905 - RNU6-504P
Exon structure

hugo2721 ENSG00000252377 RNA, U6 small nuclear 504, pseudogene
23651646434 51646946 - ENSG00000228827
Exon structure


ENSG00000228827
23751664960 51665595 - IPO7P1
Exon structure

100129708 ENSG00000232951 importin 7 pseudogene 1
23851666640 51667066 + LOC644310
Exon structure

644310 ENSG00000237528
23951722319 51723108 - TPMTP3
Exon structure

100129277 ENSG00000232562 thiopurine S-methyltransferase pseudogene 3
24051793956 51797351 - LOC401589
Exon structure
Hs.553803 401589 ENSG00000182776 Uncharacterized LOC401589 (est)
24151806443 51806570 - SNORA11E
Exon structure

101340250 ENSG00000221705 small nucleolar RNA, H/ACA box 11E
24251804923 51812368 - MAGED4B
Exon structure

81557 ENSG00000187243 melanoma antigen family D, 4B
24351844755 51844784 + PIR55984
Exon structure