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#	Start (bp)	End (bp)	Strand	Gene	Unigene cluster	Entrez Gene Id	Ensembl Id	Description
1	44732423	44971847	+	KDM6A Exon structure	Hs.522616	7403	ENSG00000147050	lysine (K)-specific demethylase 6A
2	45007618	45060146	-	CXorf36 Exon structure	Hs.98321	79742	ENSG00000147113	chromosome X open reading frame 36
3	45042496	45193162	+	ENSG00000229491 Exon structure			ENSG00000229491
4	45240771	45241325	-	LOC139061 Exon structure		139061	ENSG00000237782
5	45249576	45267833	+	GC0XP045250
6	45254672	45374391	+	GC0XP045254
7	45364632	45382889	+	GC0XP045366
8	45364632	45386484	+	GC0XP045365
9	45380854	45380881	+	PIR35886 Exon structure
10	45364633	45489447	+	ENSG00000229563 Exon structure			ENSG00000229563
11	45420855	45461792	+	GC0XP045420
12	45477189	45477215	+	PIR35001 Exon structure
13	45491316	45493055	-	KRT8P14 Exon structure		347333	ENSG00000214282	keratin 8 pseudogene 14
14	45578523	45579138	-	GC0XM045579
15	45590241	45591180	+	LOC392452 Exon structure		392452	ENSG00000204915
16	45592271	45595391	-	GC0XM045594
17	45592452	45595864	-	GC0XM045593
18	45605585	45605694	-	MIR221 Exon structure		407006	ENSG00000207870	microRNA 221
19	45605609	45605671	-	GC0XM045607
20	45606421	45606530	-	MIR222 Exon structure		407007	ENSG00000207725	microRNA 222
21	45606420	45606530	-	GC0XM045608
22	45621127	45621209	-	GC0XM045623
23	45628084	45630999	+	GC0XP045629
24	45604650	45710969	-	GC0XM045609
25	45707328	45710920	-	ENSG00000231566 Exon structure			ENSG00000231566
26	45752347	45752414	-	ENSG00000212347 Exon structure			ENSG00000212347
27	45752346	45752414	-	GC0XM045753
28	45772553	45773309	+	LOC100128442 Exon structure		100128442	ENSG00000215286
29	45772702	45776475	-	ENSG00000234613 Exon structure			ENSG00000234613
30	45811197	45811768	-	MED28P4 Exon structure		100130359	ENSG00000224701	mediator complex subunit 28 pseudogene 4
31	45842800	45843908	+	LOC139060 Exon structure		139060	ENSG00000213100
32	45918186	45918963	-	PCNAP3 Exon structure		392454	ENSG00000214009	proliferating cell nuclear antigen pseudogene 3
33	45982442	45982469	-	PIR35591 Exon structure
34	45992910	45993894	+	GC0XP045993
35	46062921	46067256	+	GC0XP046065
36	46070302	46072024	-	GC0XM046072
37	46147449	46148563	-	ACTBP1 Exon structure		643309	ENSG00000229145	actin, beta pseudogene 1
38	46173492	46187104	-	GC0XM046173
39	46185359	46187080	-	ENSG00000236751 Exon structure			ENSG00000236751
40	46277774	46279532	-	LOC392456 Exon structure		392456	ENSG00000231235
41	46299144	46300149	-	GAPDHP65 Exon structure		389849	ENSG00000235587	glyceraldehyde 3 phosphate dehydrogenase pseudogene 65
42	46312895	46316675	-	LOC100113397 Exon structure		100113397	ENSG00000224072
43	46319732	46321944	+	GC0XP046321
44	46306292	46356857	+	KRBOX4 Exon structure	Hs.632800	55634	ENSG00000147121	KRAB box domain containing 4
45	46347860	46347889	+	PIR59713 Exon structure
46	46377058	46377335	+	RNU6-50 Exon structure		26825	ENSG00000199226	RNA, U6 small nuclear 50
47	46377200	46377303	+	GC0XP046380
48	46357160	46404892	-	ZNF674 Exon structure	Hs.636105	641339	ENSG00000251192	zinc finger protein 674
49	46400708	46400737	+	PIR38034 Exon structure
50	46404928	46407671	+	ZNF674-AS1 Exon structure	Hs.729370	401588	ENSG00000230844	ZNF674 antisense RNA 1 (head to head)
51	46420735	46422183	-	LOC100271918 Exon structure		100271918
52	46433192	46457843	+	CHST7 Exon structure	Hs.129955	56548	ENSG00000147119	carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7
53	46458742	46461839	-	GC0XM046459
54	46464683	46465404	+	GC0XP046465
55	46471233	46471261	-	PIR58897 Exon structure
56	46506029	46506765	-	PGAM1P7 Exon structure		100420650	ENSG00000213997	phosphoglycerate mutase 1 pseudogene 7
57	46529111	46529137	-	PIR51216 Exon structure
58	46464753	46618490	-	SLC9A7 Exon structure		84679	ENSG00000065923	solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7
59	46544200	46545142	-	YBX1P8 Exon structure		100861476	ENSG00000226048	Y box binding protein 1 pseudogene 8
60	46584597	46585253	-	LOC100420317 Exon structure		100420317	ENSG00000215284
61	46696347	46741793	+	RP2 Exon structure	Hs.44766	6102	ENSG00000102218	retinitis pigmentosa 2 (X-linked recessive)
62	46746852	46759138	-	CXorf31 Exon structure	Hs.679235	724087	ENSG00000204904	chromosome X open reading frame 31
63	46757034	46757743	+	GC0XP046758
64	46771711	46920641	+	PHF16 Exon structure	Hs.371977	9767	ENSG00000102221	PHD finger protein 16
65	46937775	46952712	+	RGN Exon structure	Hs.77854	9104	ENSG00000130988	regucalcin (senescence marker protein-30)
66	46946905	46947011	+	ENSG00000206685 Exon structure			ENSG00000206685
67	46946904	46947011	+	GC0XP046947
68	46988763	46990742	+	GC0XP046989
69	46991712	46992256	+	GC0XP046997
70	46992069	46992225	+	GC0XP046995
71	46992070	46992225	+	RNU12-2P Exon structure		26823	ENSG00000201659	RNA, U12 small nuclear 2, pseudogene
72	47001615	47004903	-	NDUFB11 Exon structure	Hs.521969	54539	ENSG00000147123	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa
73	47016037	47017598	-	LOC100421108 Exon structure		100421108	ENSG00000237351
74	47004268	47046212	+	RBM10 Exon structure	Hs.401509	8241	ENSG00000182872	RNA binding motif protein 10
75	47032622	47033210	+	GC0XP047034
76	47042194	47043064	+	GC0XP047043
77	47050199	47074527	+	UBA1 Exon structure	Hs.533273	7317	ENSG00000130985	ubiquitin-like modifier activating enzyme 1
78	47064434	47064851	+	GC0XP047065
79	47064435	47064851	+	GC0XP047066
80	47064247	47065264	+	INE1 Exon structure	Hs.657350	8552	ENSG00000224975	inactivation escape 1 (non-protein coding)
81	47077259	47089396	+	CDK16 Exon structure	Hs.496068	5127	ENSG00000102225	cyclin-dependent kinase 16
82	47092089	47107727	+	USP11 Exon structure	Hs.171501	8237	ENSG00000102226	ubiquitin specific peptidase 11
83	47102797	47102827	+	PIR42211 Exon structure
84	47128504	47133961	-	NICN2P Exon structure		171176	ENSG00000237623	nicolin 2, pseudogene
85	47138526	47138629	+	ENSG00000238729 Exon structure			ENSG00000238729
86	47140214	47140462	-	ENSG00000266158 Exon structure			ENSG00000266158
87	47157251	47158120	+	ENSG00000203402 Exon structure			ENSG00000203402
88	47176881	47176908	+	PIR34305 Exon structure
89	47211241	47211348	-	GC0XM047212
90	47211242	47211348	-	ENSG00000201450 Exon structure			ENSG00000201450
91	47248048	47248176	+	SNORA11C Exon structure	Hs.693443	100124540	ENSG00000221459	small nucleolar RNA, H/ACA box 11C
92	47248046	47248184	+	GC0XP047249
93	47249360	47251699	-	LOC100419232 Exon structure		100419232	ENSG00000232009
94	47229982	47273704	+	ZNF157 Exon structure	Hs.89897	7712	ENSG00000147117	zinc finger protein 157
95	47298135	47299173	-	LOC100422284 Exon structure		100422284	ENSG00000226556
96	47305278	47342345	-	ZNF41 Exon structure	Hs.737678; Hs.496074	7592	ENSG00000147124	zinc finger protein 41
97	47333966	47344207	+	CXorf24 Exon structure	Hs.597617	203414	ENSG00000196741	chromosome X open reading frame 24
98	47369194	47373059	-	NUS1P1 Exon structure		729148	ENSG00000235636	nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) pseudogene 1
99	47371723	47372539	+	GC0XP047373
100	47372683	47373765	+	GC0XP047374
101	47415405	47418281	-	GC0XM047416
102	47420516	47431320	+	ARAF Exon structure	Hs.446641	369	ENSG00000078061	v-raf murine sarcoma 3611 viral oncogene homolog
103	47430989	47431326	+	GC0XP047434
104	47430990	47431326	+	GC0XP047435
105	47441690	47446190	+	TIMP1 Exon structure	Hs.522632	7076	ENSG00000102265	TIMP metallopeptidase inhibitor 1
106	47446828	47446904	+	MIR4769 Exon structure		100616147	ENSG00000263858	microRNA 4769
107	47431300	47479256	-	SYN1 Exon structure	Hs.225936	6853	ENSG00000008056	synapsin I
108	47483612	47489704	-	CFP Exon structure	Hs.53155	5199	ENSG00000126759	complement factor properdin
109	47494920	47510003	-	ELK1 Exon structure	Hs.181128	2002	ENSG00000126767	ELK1, member of ETS oncogene family
110	47511195	47518560	-	UXT Exon structure	Hs.172791	8409	ENSG00000126756	ubiquitously-expressed, prefoldin-like chaperone
111	47518232	47519776	+	LOC100133957 Exon structure	Hs.546106	100133957	ENSG00000267064	Uncharacterized LOC100133957 (est)
112	47531908	47544867	+	GC0XP047532
113	47577401	47578498	-	LOC100419053 Exon structure		100419053	ENSG00000224656
114	47566590	47612855	+	CXXC1P1 Exon structure	Hs.562045	392459	ENSG00000187893	CXXC finger protein 1 pseudogene 1
115	47602475	47603565	+	LOC100419908 Exon structure		100419908
116	47636226	47638096	-	LOC100419784 Exon structure		100419784	ENSG00000229968
117	47657325	47666732	+	WASF4P Exon structure		644739	ENSG00000188459	WAS protein family, member 4, pseudogene
118	47665165	47665195	+	PIR52914 Exon structure
119	47695352	47696186	-	LOC441493 Exon structure	Hs.496083	441493		Uncharacterized LOC441493 (est)
120	47698848	47698874	+	PIR57381 Exon structure
121	47700362	47701109	-	RPL7P57 Exon structure		643507	ENSG00000224401	ribosomal protein L7 pseudogene 57
122	47696301	47861960	+	ZNF81 Exon structure	Hs.114246	347344	ENSG00000197779	zinc finger protein 81
123	47783117	47785023	+	GC0XP047784
124	47835694	47835862	-	GC0XM047837
125	47836020	47836049	-	PIR34840 Exon structure
126	47834250	47863394	-	ZNF182 Exon structure	Hs.189690	7569	ENSG00000147118	zinc finger protein 182
127	47863734	47869130	+	SPACA5 Exon structure	Hs.319319	389852	ENSG00000171489	sperm acrosome associated 5
128	47875919	47875946	+	PIR35699 Exon structure
129	47842756	47931025	-	ZNF630 Exon structure	Hs.650883	57232	ENSG00000221994	zinc finger protein 630
130	47915699	47925971	+	ZNF630-AS1 Exon structure		100874120	ENSG00000238068	ZNF630 antisense RNA 1
131	47917566	47931025	-	GC0XM047918
132	47941136	47941239	+	ENSG00000238473 Exon structure			ENSG00000238473
133	47967365	47980073	+	SSX6 Exon structure	Hs.511998	280657	ENSG00000171483	synovial sarcoma, X breakpoint 6 (pseudogene)
134	47975310	47975342	+	PIR56028 Exon structure
135	47990039	47991995	+	SPACA5B Exon structure	Hs.712503	729201	ENSG00000171478	sperm acrosome associated 5B
136	47995036	47995537	-	ENSG00000230241 Exon structure			ENSG00000230241
137	48013395	48013502	-	GC0XM048038
138	48013408	48013502	-	ENSG00000201517 Exon structure			ENSG00000201517
139	48012421	48015399	-	LOC643554 Exon structure		643554
140	48013296	48015369	-	ENSG00000233139 Exon structure			ENSG00000233139
141	48015795	48025778	+	SSXP3 Exon structure		326341	ENSG00000225198	SSX family pseudogene 3
142	48037167	48037459	-	ENSG00000238032 Exon structure			ENSG00000238032
143	48045656	48056199	-	SSX5 Exon structure	Hs.166198	6758	ENSG00000165583	synovial sarcoma, X breakpoint 5
144	48056657	48058867	+	LOC100420083 Exon structure		100420083	ENSG00000234780
145	48065693	48065809	+	RNA5SP503 Exon structure		100873554	ENSG00000252856	RNA, 5S ribosomal pseudogene 503
146	48072226	48077445	+	ENSG00000204368 Exon structure			ENSG00000204368
147	48078053	48078818	-	GC0XM048079
148	48088268	48088394	-	ENSG00000231568 Exon structure			ENSG00000231568
149	48104314	48105181	+	LOC100420084 Exon structure		100420084	ENSG00000229662
150	48114752	48126879	+	SSX1 Exon structure	Hs.434142	6756	ENSG00000126752	synovial sarcoma, X breakpoint 1
151	48134339	48134482	-	ENSG00000232813 Exon structure			ENSG00000232813
152	48136138	48137013	-	LOC100420551 Exon structure		100420551	ENSG00000241207
153	48136027	48138786	+	SSXP8 Exon structure		326585		SSX family pseudogene 8
154	48138825	48141573	+	LOC791091 Exon structure		791091	ENSG00000237345
155	48154885	48165732	-	SSX9 Exon structure		280660	ENSG00000204648	synovial sarcoma, X breakpoint 9
156	48166204	48169125	+	LOC791092 Exon structure		791092	ENSG00000234391
157	48181628	48187807	+	SSXP9 Exon structure		326586	ENSG00000227302	SSX family pseudogene 9
158	48193110	48193874	-	ENSG00000230100 Exon structure			ENSG00000230100
159	48205863	48216142	-	SSX3 Exon structure	Hs.558445	10214	ENSG00000165584	synovial sarcoma, X breakpoint 3
160	48216531	48219894	+	LOC791093 Exon structure		791093	ENSG00000225055
161	48231338	48231528	+	ENSG00000234448 Exon structure			ENSG00000234448
162	48238783	48242594	-	LOC791094 Exon structure		791094	ENSG00000231603
163	48242863	48252785	+	SSX4 Exon structure		6759	ENSG00000204645	synovial sarcoma, X breakpoint 4
164	48261524	48271344	-	SSX4B Exon structure	Hs.558402; Hs.648298	548313	ENSG00000198946	synovial sarcoma, X breakpoint 4B
165	48271718	48275360	+	LOC791095 Exon structure		791095	ENSG00000229620
166	48281727	48281853	-	ENSG00000231489 Exon structure			ENSG00000231489
167	48291580	48291653	+	SSXP6 Exon structure		326587		SSX family pseudogene 6
168	48291580	48299998	+	ENSG00000235350 Exon structure			ENSG00000235350
169	48299898	48301356	+	SSXP7 Exon structure		326590		SSX family pseudogene 7
170	48304640	48307281	-	LOC791096 Exon structure		791096	ENSG00000226971
171	48316920	48328644	-	SLC38A5 Exon structure	Hs.195155	92745	ENSG00000017483	solute carrier family 38, member 5
172	48323105	48324489	-	GC0XM048324
173	48334541	48344752	+	FTSJ1 Exon structure	Hs.23170	24140	ENSG00000068438	FtsJ RNA methyltransferase homolog 1 (E. coli)
174	48364911	48367226	-	ENSG00000224292 Exon structure			ENSG00000224292
175	48367350	48379202	+	PORCN Exon structure	Hs.386453	64840	ENSG00000102312	porcupine homolog (Drosophila)
176	48379546	48387104	+	EBP Exon structure	Hs.30619	10682	ENSG00000147155	emopamil binding protein (sterol isomerase)
177	48397845	48420997	+	TBC1D25 Exon structure	Hs.694353	4943	ENSG00000068354	TBC1 domain family, member 25
178	48420090	48420189	-	ENSG00000239017 Exon structure			ENSG00000239017
179	48420512	48420630	-	GC0XM048424
180	48420469	48420797	+	GC0XP048423
181	48420469	48420797	+	GC0XP048424
182	48431482	48433275	-	ENSG00000204620 Exon structure			ENSG00000204620
183	48432836	48437454	+	RBM3 Exon structure	Hs.301404	5935	ENSG00000102317	RNA binding motif (RNP1, RRM) protein 3
184	48438162	48439545	-	ENSG00000228343 Exon structure			ENSG00000228343
185	48441481	48441744	-	MRPL32P1 Exon structure		359741	ENSG00000220125	mitochondrial ribosomal protein L32 pseudogene 1
186	48448430	48463582	+	WDR13 Exon structure	Hs.521973	64743	ENSG00000101940	WD repeat domain 13
187	48494553	48495547	+	VN1R110P Exon structure		100312803	ENSG00000231725	vomeronasal 1 receptor 110 pseudogene
188	48518657	48518685	+	PIR50087 Exon structure
189	48518831	48518861	+	PIR44416 Exon structure
190	48521666	48521938	+	GC0XP048522
191	48534985	48549818	+	WAS Exon structure	Hs.2157	7454	ENSG00000015285	Wiskott-Aldrich syndrome
192	48553945	48567407	+	SUV39H1 Exon structure	Hs.522639	6839	ENSG00000101945	suppressor of variegation 3-9 homolog 1 (Drosophila)
193	48557354	48595570	-	ENSG00000232828 Exon structure			ENSG00000232828
194	48582859	48582966	-	GC0XM048583
195	48582860	48582966	-	ENSG00000206723 Exon structure			ENSG00000206723
196	48593889	48593919	+	PIR41370 Exon structure
197	48607055	48607082	-	PIR45163 Exon structure
198	48620154	48632064	+	GLOD5 Exon structure	Hs.437539	392465	ENSG00000171433	glyoxalase domain containing 5
199	48634408	48635385	-	LOC100420869 Exon structure		100420869	ENSG00000233585
200	48635379	48635486	-	GC0XM048639
201	48635380	48635486	-	RNU6-29 Exon structure		hugo426	ENSG00000207367	RNA, U6 small nuclear 29
202	48644962	48652718	+	GATA1 Exon structure	Hs.765	2623	ENSG00000102145	GATA binding protein 1 (globin transcription factor 1)
203	48659784	48683392	+	HDAC6 Exon structure	Hs.6764	10013	ENSG00000094631	histone deacetylase 6
204	48681966	48681992	+	PIR34696 Exon structure
205	48687283	48688548	+	ERAS Exon structure	Hs.447330	3266	ENSG00000187682	ES cell expressed Ras
206	48689504	48694035	-	PCSK1N Exon structure	Hs.522640	27344	ENSG00000102109	proprotein convertase subtilisin/kexin type 1 inhibitor
207	48750730	48755426	-	TIMM17B Exon structure	Hs.30570	10245	ENSG00000126768	translocase of inner mitochondrial membrane 17 homolog B (yeast)
208	48755195	48760422	+	PQBP1 Exon structure	Hs.534384	10084	ENSG00000102103	polyglutamine binding protein 1
209	48761820	48761850	-	PIR49778 Exon structure
210	48760459	48769235	-	SLC35A2 Exon structure	Hs.21899	7355	ENSG00000102100	solute carrier family 35 (UDP-galactose transporter), member A2
211	48770459	48776413	-	PIM2 Exon structure	Hs.727148	11040	ENSG00000102096	pim-2 oncogene
212	48779301	48815648	-	OTUD5 Exon structure	Hs.496098	55593	ENSG00000068308	OTU domain containing 5
213	48797263	48798079	+	ENSG00000184596 Exon structure			ENSG00000184596
214	48816440	48816543	-	ENSG00000223309 Exon structure			ENSG00000223309
215	48818639	48828251	-	KCND1 Exon structure	Hs.55276	3750	ENSG00000102057	potassium voltage-gated channel, Shal-related subfamily, member 1
216	48823404	48823518	-	GC0XM048825
217	48823404	48823518	-	GC0XM048826
218	48830134	48858675	-	GRIPAP1 Exon structure	Hs.109929	56850	ENSG00000068400	GRIP1 associated protein 1
219	48863969	48864276	-	ENSG00000264065 Exon structure			ENSG00000264065
220	48886242	48901012	-	TFE3 Exon structure	Hs.730740	7030	ENSG00000068323	transcription factor binding to IGHM enhancer 3
221	48911018	48911407	+	GC0XP048913
222	48916514	48927510	+	CCDC120 Exon structure	Hs.522643	90060	ENSG00000147144	coiled-coil domain containing 120