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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome X

   GeneLoc map region (39,374,187 - 43,782,716 bp) around gene/marker "CASK"

   Explanation:
   CASK is located at 41,374,187-41,782,716 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
139520470 39520575 + MIR3937
Exon structure

100500822 ENSG00000263730 microRNA 3937
239645780 39646077 - GC0XM039663



339645780 39646077 - RN7SL732P
Exon structure

hugo1537 ENSG00000264618 RNA, 7SL, cytoplasmic 732, pseudogene
439646130 39646370 + GC0XP039646



539646186 39647390 - GAPDHP1
Exon structure

2616 ENSG00000228232 glyceraldehyde-3-phosphate dehydrogenase pseudogene 1
639650834 39651158 - ENSG00000270759
Exon structure


ENSG00000270759
739661778 39662624 + GC0XP039661



839663952 39665471 + GC0XP039663



939681271 39681758 + GC0XP039684



1039696815 39696867 + MIR1587
Exon structure

100616251 ENSG00000263972 microRNA 1587
1139696790 39707612 - GC0XM039698



1239724678 39725190 + RPS11P7
Exon structure

642687 ENSG00000214047 ribosomal protein S11 pseudogene 7
1339776191 39776218 + PIR53061
Exon structure




1439796557 39797694 + GC0XP039800



1539868529 39871435 + ENSG00000223486
Exon structure


ENSG00000223486
1639958945 39962809 - GC0XM039966



1739958944 39962809 - GC0XM039965



1839909068 40036582 - BCOR
Exon structure
Hs.659681 54880 ENSG00000183337 BCL6 corepressor
1940059800 40059830 + PIR38256
Exon structure




2040122130 40146974 + GC0XP040126



2140122170 40146973 + RP11-320G24.1
Exon structure

101927476 ENSG00000236393
2240144349 40144452 + ENSG00000238920
Exon structure


ENSG00000238920
2340217979 40218009 + GC0XP040263



2440217979 40218009 + GC0XP040266



2540217979 40218009 + GC0XP040248



2640217979 40218009 + GC0XP040278



2740217979 40218009 + GC0XP040249



2840217984 40218014 + GC0XP040289



2940217984 40218014 + GC0XP040290



3040217984 40218014 + GC0XP040288



3140217984 40218014 + GC0XP040287



3240217984 40218014 + GC0XP040291



3340218597 40218627 + GC0XP040241



3440218597 40218627 + GC0XP040261



3540218597 40218627 + GC0XP040260



3640218597 40218627 + GC0XP040274



3740218597 40218626 + GC0XP040286



3840218597 40218627 + GC0XP040256



3940218597 40218626 + GC0XP040285



4040218597 40218626 + GC0XP040282



4140218597 40218626 + GC0XP040284



4240218597 40218626 + GC0XP040283



4340218597 40218628 + GC0XP040247



4440218597 40218628 + GC0XP040270



4540218597 40218628 + GC0XP040271



4640218597 40218628 + GC0XP040280



4740218599 40218629 + GC0XP040275



4840218599 40218629 + GC0XP040242



4940218599 40218629 + GC0XP040240



5040218599 40218629 + GC0XP040245



5140218599 40218630 + GC0XP040262



5240218600 40218630 + GC0XP040246



5340218600 40218630 + GC0XP040257



5440218599 40218630 + GC0XP040251



5540218599 40218630 + GC0XP040258



5640218600 40218630 + GC0XP040252



5740218599 40218630 + GC0XP040264



5840218600 40218630 + GC0XP040272



5940218607 40218637 + GC0XP040243



6040218607 40218637 + GC0XP040268



6140218607 40218637 + GC0XP040279



6240218607 40218637 + GC0XP040269



6340217710 40220062 - IMPDH1P2
Exon structure

402394 ENSG00000214045 IMP (inosine monophosphate) dehydrogenase 1 pseudogene 2
6440218917 40218943 - PIR53096
Exon structure




6540219364 40219394 + GC0XP040281



6640219364 40219394 + GC0XP040255



6740219364 40219394 + GC0XP040265



6840219364 40219394 + GC0XP040250



6940219688 40219719 + GC0XP040236



7040219688 40219719 + GC0XP040276



7140219688 40219719 + GC0XP040244



7240219688 40219719 + GC0XP040267



7340219688 40219719 + GC0XP040253



7440219688 40219719 + GC0XP040254



7540219688 40219719 + GC0XP040273



7640352095 40352186 + GC0XP040355



7740352092 40352192 + ENSG00000206677
Exon structure


ENSG00000206677
7840374147 40374760 + ENSG00000235685
Exon structure


ENSG00000235685
7940394753 40394803 - GC0XM040398



8040394754 40394815 - RNU7-164P
Exon structure

hugo3447 ENSG00000238730 RNA, U7 small nuclear 164 pseudogene
8140400124 40418885 - GC0XM040400



8240440234 40460133 + GC0XP040441



8340440146 40465889 + ATP6AP2
Exon structure
Hs.495960 10159 ENSG00000182220 ATPase, H+ transporting, lysosomal accessory protein 2
8440482818 40483388 + MPC1L
Exon structure
Hs.128084 347411 ENSG00000238205 mitochondrial pyruvate carrier 1-like
8540486173 40506819 - CXorf38
Exon structure
Hs.495961 159013 ENSG00000185753 chromosome X open reading frame 38
8640531179 40542165 - GC0XM040531



8740507558 40595110 - MED14
Exon structure
Hs.407604 9282 ENSG00000180182 mediator complex subunit 14
8840573130 40574303 - GC0XM040573



8940585707 40594550 - GC0XM040585



9040594652 40597950 + MED14OS
Exon structure

100873985 ENSG00000234636 MED14 opposite strand
9140597977 40598140 + GC0XP040604



9240597977 40598140 + GC0XP040603



9340617684 40618342 + DPRXP6
Exon structure

503647 ENSG00000270791 divergent-paired related homeobox pseudogene 6
9440617736 40618303 + GC0XP040619



9540619345 40620572 - LOC100129851
Exon structure

100129851 ENSG00000214031
9640652620 40664809 - GC0XM040652



9740671203 40704710 - GC0XM040673



9840691097 40691815 - GC0XM040694



9940690470 40692449 - LOC100132831
Exon structure
Hs.729923 100132831 ENSG00000237661 A20-binding inhibitor of NF-kappaB activation 2 pseudogene (est)
10040693397 40697065 + MKRN4P
Exon structure

7682 ENSG00000238222 makorin ring finger protein 4, pseudogene
10140722418 40722445 + PIR43860
Exon structure




10240715245 40731295 + GC0XP040718



10340723620 40723650 + GC0XP040726



10440723620 40723650 + PIR53603
Exon structure




10540749900 40750790 - SDCBPP3
Exon structure

100131656 ENSG00000232801 syndecan binding protein (syntenin) pseudogene 3
10640756469 40767644 + RPL32P36
Exon structure

392447 ENSG00000189145 ribosomal protein L32 pseudogene 36
10740794192 40795140 - RPS2P55
Exon structure

286444 ENSG00000216866 ribosomal protein S2 pseudogene 55
10840864034 40865171 - GC0XM040864



10940875440 40877118 + GC0XP040875



11040895910 40895940 + PIR36105
Exon structure




11140936252 40937007 + CLIC4P3
Exon structure

442447 ENSG00000237931 chloride intracellular channel 4 pseudogene 3
11240938788 40939133 + GC0XP040939



11340944888 41095832 + USP9X
Exon structure
Hs.77578 8239 ENSG00000124486 ubiquitin specific peptidase 9, X-linked
11441043247 41043993 + GC0XP041043



11541047319 41049175 + GC0XP041047



11641064312 41069907 + GC0XP041064



11741088236 41089149 + GC0XP041088



11841092886 41093536 + ENSG00000269941
Exon structure


ENSG00000269941
11941095109 41095832 + GC0XP041096



12041112058 41112474 - GC0XM041112



12141125930 41126163 - GC0XM041125



12241134992 41136031 + ENSG00000223714
Exon structure


ENSG00000223714
12341152051 41152169 + RNA5SP502
Exon structure

100873553 ENSG00000199564 RNA, 5S ribosomal pseudogene 502
12441152050 41152169 + GC0XP041157



12541161908 41162478 - GC0XM041161



12641175740 41175840 + GC0XP041178



12741175741 41175842 + ENSG00000238426
Exon structure


ENSG00000238426
12841181854 41182588 - LOC643043
Exon structure

643043 ENSG00000226641
12941192651 41197822 + GC0XP041193



13041201810 41201837 + PIR48586
Exon structure




13141204835 41205129 - RN7SL15P
Exon structure

hugo912 ENSG00000264573 RNA, 7SL, cytoplasmic 15, pseudogene
13241206598 41206625 + PIR61366
Exon structure




13341192651 41223725 + DDX3X
Exon structure
Hs.743263 1654 ENSG00000215301 DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
13441208313 41208341 + PIR52979
Exon structure




13541306687 41334963 + NYX
Exon structure
Hs.302019 60506 ENSG00000188937 nyctalopin
13641331511 41331906 - LOC100506654
Exon structure

100506654 ENSG00000225238
13741331434 41332962 + GC0XP041331



13841374191 41377611 - GC0XM041378



13941379289 41381589 + CASK-AS1
Exon structure

100873928 ENSG00000233033 CASK antisense RNA 1
14041430176 41430282 - ENSG00000212207
Exon structure


ENSG00000212207
14141430175 41430282 - GC0XM041434



14241496727 41497012 + RN7SL406P
Exon structure

hugo1181 ENSG00000265741 RNA, 7SL, cytoplasmic 406, pseudogene
14341519354 41525085 - GC0XM041519



14441533105 41535851 - LOC158781
Exon structure

158781 ENSG00000217624
14541542424 41542719 - RN7SL144P
Exon structure

hugo895 ENSG00000242559 RNA, 7SL, cytoplasmic 144, pseudogene
14641548226 41556530 + GPR34
Exon structure
Hs.495989 2857 ENSG00000171659 G protein-coupled receptor 34
14741374187 41782716 - CASK
Exon structure
Hs.495984 8573 ENSG00000147044 calcium/calmodulin-dependent serine protein kinase (MAGUK family)
14841583408 41589388 + GPR82
Exon structure
Hs.567457 27197 ENSG00000171657 G protein-coupled receptor 82
14941587386 41588024 + GC0XP041587



15041607475 41607861 + GC0XP041609



15141607436 41607918 + RPS15AP39
Exon structure

100129284 ENSG00000229822 ribosomal protein S15a pseudogene 39
15241649445 41649503 - ENSG00000237875
Exon structure


ENSG00000237875
15341602866 41782268 - GC0XM041602



15441778507 41778602 - ENSG00000251807
Exon structure


ENSG00000251807
15541907136 41914089 - ENSG00000233103
Exon structure


ENSG00000233103
15641957856 41958484 - ATP5G2P4
Exon structure

654480 ENSG00000228847 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) pseudogene 4
15741958007 41958426 - GC0XM041960



15841998677 41998783 - GC0XM042002



15941998678 41998783 - ENSG00000212560
Exon structure


ENSG00000212560
16042009764 42009997 - ENSG00000228780
Exon structure


ENSG00000228780
16142021345 42021375 + PIR52788
Exon structure




16242033531 42033638 - GC0XM042037



16342033532 42033638 - ENSG00000206896
Exon structure


ENSG00000206896
16442111712 42558636 + ENSG00000231772
Exon structure


ENSG00000231772
16542481365 42499909 + GC0XP042481



16642552347 42555393 - GC0XM042552



16742636617 42637486 - PPP1R2P9
Exon structure
Hs.127689 80316 ENSG00000102055 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 9
16842654025 42654054 + PIR61194
Exon structure




16942797222 42856698 - GC0XM042800



17042859423 42859645 + ENSG00000270280
Exon structure


ENSG00000270280
17143036243 43085847 + RP3-326I13.1
Exon structure

101927501 ENSG00000224294
17243135375 43136908 - IMPDH1P4
Exon structure

139334 ENSG00000237206 IMP (inosine monophosphate) dehydrogenase 1 pseudogene 4
17343137555 43137585 + GC0XP043142



17443137555 43137585 + GC0XP043144



17543137555 43137585 + GC0XP043141



17643138260 43138292 + GC0XP043143



17743138260 43138292 + GC0XP043145



17843266291 43267995 - NANOGP10
Exon structure

349372 ENSG00000231750 Nanog homeobox pseudogene 10
17943278113 43297884 + GC0XP043278



18043310400 43310426 + PIR34051
Exon structure




18143515409 43606068 + MAOA
Exon structure
Hs.183109 4128 ENSG00000189221 monoamine oxidase A
18243602951 43603905 + GC0XP043602



18343610183 43624729 + GC0XP043610



18443625857 43741721 - MAOB
Exon structure
Hs.654473 4129 ENSG00000069535 monoamine oxidase B
18543696827 43697488 - GC0XM043699



18643703046 43741549 - GC0XM043703