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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 9

   GeneLoc map region (621,774 - 4,660,053 bp) around gene/marker "VLDLR"

   Explanation:
   VLDLR is located at 2,621,774-2,660,053 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
1470291 746106 + KANK1
Exon structure
Hs.306764 23189 ENSG00000107104 KN motif and ankyrin repeat domains 1
2659986 660326 + EIF1P1
Exon structure

100505855 ENSG00000229875 eukaryotic translation initiation factor 1 pseudogene 1
3673478 685555 - ENSG00000227914
Exon structure


ENSG00000227914
4774692 774723 + GC09P000774



5841647 969090 + DMRT1
Exon structure
Hs.98586 1761 ENSG00000137090 doublesex and mab-3 related transcription factor 1
6908608 946416 - GC09M000908



7927110 928802 + GC09P000927



8932349 932375 + PIR40320
Exon structure




9941184 955083 + GC09P000941



10971472 971501 - PIR60936
Exon structure




11971523 971552 - PIR33633
Exon structure




12972812 972841 + PIR36801
Exon structure




13972910 972939 - PIR46442
Exon structure




14972971 972998 - PIR53361
Exon structure




15973339 973371 + GC09P000979



16973339 973371 + PIR56215
Exon structure




17973532 973559 + PIR39039
Exon structure




18973993 974020 + PIR49791
Exon structure




19974020 974048 + PIR37086
Exon structure




20974188 974410 + GC09P000980



21975548 983384 + GC09P000982



22976964 991732 + DMRT3
Exon structure
Hs.189174; Hs.672740 58524 ENSG00000064218 doublesex and mab-3 related transcription factor 3
23998326 998353 - PIR35120
Exon structure




24998759 998790 + PIR46494
Exon structure




25998805 998835 - PIR32380
Exon structure




261001858 1001963 - RNU6-1073P
Exon structure

hugo1957 ENSG00000252991 RNA, U6 small nuclear 1073, pseudogene
271011085 1011799 + ENSG00000228783
Exon structure


ENSG00000228783
281046757 1057554 + DMRT2
Exon structure
Hs.59506 10655 ENSG00000173253 doublesex and mab-3 related transcription factor 2
291094076 1096569 + GC09P001094



301151807 1152140 - ENSG00000224836
Exon structure


ENSG00000224836
311164414 1164867 - RPS27AP14
Exon structure

100271378 ENSG00000236594 ribosomal protein S27a pseudogene 14
321320119 1320232 + GC09P001320



331328664 1328987 + ENSG00000233575
Exon structure


ENSG00000233575
341327155 1333176 + LOC102723803
Exon structure

102723803

351333836 1333953 + GC09P001336



361333837 1333953 + RNA5SP279
Exon structure

100873532 ENSG00000202383 RNA, 5S ribosomal pseudogene 279
371346956 1359033 - GC09M001346



381368544 1395220 + GC09P001368



391368548 1395222 + GC09P001369



401492862 1497487 + GC09P001492



411494826 1508964 - GC09M001494



421505444 1508229 - GC09M001505



431707205 1707239 + PIR59143
Exon structure




441954272 1967229 + GC09P001954



451954276 1967231 + GC09P001955



461977784 1978547 - ENSG00000224092
Exon structure


ENSG00000224092
472022170 2022884 + GC09P002022



482041900 2046023 - ENSG00000236199
Exon structure


ENSG00000236199
492042994 2046019 + GC09P002042



502082438 2083739 - GC09M002082



512090852 2094668 + GC09P002090



522100708 2101976 + GC09P002101



532100708 2101976 + GC09P002102



542100708 2101978 + GC09P002100



552015219 2193624 + SMARCA2
Exon structure
Hs.298990 6595 ENSG00000080503 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
562162763 2162953 - RNU2-25P
Exon structure

hugo1730 ENSG00000222973 RNA, U2 small nuclear 25, pseudogene
572162762 2162953 - GC09M002162



582192967 2193572 - GC09M002192



592228961 2229241 - RN7SL592P
Exon structure

hugo1281 ENSG00000264615 RNA, 7SL, cytoplasmic 592, pseudogene
602228963 2229241 - GC09M002228



612297641 2297674 + PIR32198
Exon structure




622423860 2494213 - LOC101930053
Exon structure

101930053

632494273 2521943 - LOC101930048
Exon structure

101930048

642422702 2643359 - VLDLR-AS1
Exon structure
Hs.416043 401491 ENSG00000236404 VLDLR antisense RNA 1
652541097 2541635 + ENSG00000231052
Exon structure


ENSG00000231052
662596552 2626860 + GC09P002596



672639898 2639927 + PIR48978
Exon structure




682621774 2660053 + VLDLR
Exon structure
Hs.370422 7436 ENSG00000147852 very low density lipoprotein receptor
692708470 2722635 + GC09P002708



702715909 2718334 - GC09M002715



712717502 2730037 + KCNV2
Exon structure
Hs.622675; Hs.740173 169522 ENSG00000168263 potassium channel, voltage gated modifier subfamily V, member 2
722759058 2759084 - PIR50784
Exon structure




732759256 2760832 - GC09M002760



742720469 2844241 - KIAA0020
Exon structure
Hs.493309 9933 ENSG00000080608 KIAA0020
752844364 2845906 + GC09P002844



762875387 2876503 - GPS2P1
Exon structure

392281 ENSG00000236496 G protein pathway suppressor 2 pseudogene 1
772900240 2900846 - ATP5HP2
Exon structure

138234 ENSG00000229184 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, pseudogene 2
782900320 2900804 - GC09M002902



792924321 2924407 - ENSG00000221450
Exon structure


ENSG00000221450
802907073 3053408 - CARM1P1
Exon structure

100130873 ENSG00000227835 coactivator-associated arginine methyltransferase 1 pseudogene 1
813157329 3157359 + GC09P003158



823181589 3200500 + LINC01231
Exon structure

101929247 ENSG00000236511 long intergenic non-protein coding RNA 1231
833218302 3223008 - GC09M003218



843364329 3364792 - ENSG00000215297
Exon structure


ENSG00000215297
853218297 3526004 - RFX3
Exon structure
Hs.136829 5991 ENSG00000080298 regulatory factor X, 3 (influences HLA class II expression)
863267036 3563080 + GC09P003267



873451797 3451816 + GC09P003451



883452305 3453987 - ENSG00000279745
Exon structure


ENSG00000279745
893471983 3472099 + GC09P003471



903475418 3475448 + PIR60517
Exon structure




913479874 3481237 + GC09P003480



923548681 3549736 + GC09P003548



933550376 3551512 + GC09P003550



943552597 3553312 + GC09P003552



953526723 3691814 + RFX3-AS1
Exon structure

101929302 ENSG00000232104 RFX3 antisense RNA 1
963647335 3648338 + ENSG00000237359
Exon structure


ENSG00000237359
973651506 3651546 - PIR36675
Exon structure




983684076 3689626 - ENSG00000226669
Exon structure


ENSG00000226669
993816259 3816289 + PIR41950
Exon structure




1003834330 3847738 - GC09M003834



1013850822 3855669 + GC09P003850



1023875584 3878809 + ENSG00000236724
Exon structure


ENSG00000236724
1033898642 3901248 + GLIS3-AS1
Exon structure
Hs.676113 84850 ENSG00000237009 GLIS3 antisense RNA 1
1044003528 4004173 + GC09P004003



1054030682 4062673 + GC09P004030



1064030686 4062675 + GC09P004031



1074070906 4071884 - ENSG00000230001
Exon structure


ENSG00000230001
1084084558 4084712 + GC09P004084



1094083800 4087923 - GC09M004083



1103824127 4348392 - GLIS3
Exon structure
Hs.162125 169792 ENSG00000107249 GLIS family zinc finger 3
1114164351 4164513 + GC09P004164



1124205812 4205839 - PIR36803
Exon structure




1134258129 4259207 - GC09M004258



1144299390 4306046 + ENSG00000228322
Exon structure


ENSG00000228322
1154378423 4378494 - ENSG00000221730
Exon structure


ENSG00000221730
1164385932 4386538 - GC09M004385



1174386412 4386507 - GC09M004386



1184386410 4386556 - RNU6-694P
Exon structure

hugo2827 ENSG00000200941 RNA, U6 small nuclear 694, pseudogene
1194436349 4436658 + GC09P004436



1204457202 4457591 - GC09M004457



1214427788 4506931 + GC09P004427



1224474158 4476133 + GC09P004474



1234477955 4478422 + GC09P004477



1244478478 4481234 + GC09P004478



1254483537 4489030 + GC09P004483



1264528970 4538652 + GC09P004528



1274490427 4587469 + SLC1A1
Exon structure
Hs.444915 6505 ENSG00000106688 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
1284561953 4561979 + PIR55745
Exon structure




1294553386 4666674 - SPATA6L
Exon structure
Hs.179615 55064 ENSG00000106686 spermatogenesis associated 6-like
1304633027 4633770 + RPS6P11
Exon structure

100270866 ENSG00000225893 ribosomal protein S6 pseudogene 11