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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 9

   GeneLoc map region (15,219 - 4,193,624 bp) around gene/marker "SMARCA2"

   Explanation:
   SMARCA2 is located at 2,015,219-2,193,624 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
117480 17547 - ENSG00000275076
Exon structure


ENSG00000275076
218648 18676 + PIR38329
Exon structure




320192 20895 - GC09M000020



414511 30487 - WASH1
Exon structure
Hs.461200; Hs.585931 100287171 ENSG00000181404 WAS protein family homolog 1
523974 26512 + GC09P000023



627657 30891 + ENSG00000227518
Exon structure


ENSG00000227518
730144 30281 + MIR1302-9
Exon structure

100422831 ENSG00000278579 microRNA 1302-9
834394 35871 - FAM138C
Exon structure
Hs.744304 654835 ENSG00000218839 family with sequence similarity 138, member C
928948 43733 - GC09M000028



1055314 58548 + GC09P000057



1145108 73177 - PGM5P3
Exon structure

101929157
phosphoglucomutase 5 pseudogene 3
1265637 65771 + GC09P000065



1368788 70258 - GC09M000069



1472674 88826 + PGM5P3-AS1
Exon structure

101929127 ENSG00000277631 PGM5P3 antisense RNA 1
15100804 102941 - ENSG00000227917
Exon structure


ENSG00000227917
1690304 118916 - GC09M000091



17100994 114247 - LINC01388
Exon structure

101929179 ENSG00000231808 long intergenic non-protein coding RNA 1388
18114005 114034 + PIR58570
Exon structure




19114832 114862 + GC09P000118



20114832 114862 + PIR36916
Exon structure




21115067 115097 + GC09P000117



22115067 115097 + PIR48620
Exon structure




23116231 118417 - FOXD4
Exon structure
Hs.584759 2298 ENSG00000170122 forkhead box D4
24117507 117825 - GC09M000118



25117507 117825 - GC09M000117



26131973 133872 - LOC105375942
Exon structure

105375942

27121038 179147 - CBWD1
Exon structure
Hs.645337; Hs.531330 55871 ENSG00000172785 COBW domain containing 1
28145402 161527 + GC09P000145



29155841 155874 + GC09P000155



30154287 163552 - LOC102724787
Exon structure

102724787

31163667 169753 - LOC105379526
Exon structure

105379526

32190714 199142 - LOC105375943
Exon structure

105375943

33202004 210844 - GC09M000202



34212824 215893 - C9orf66
Exon structure
Hs.190877 157983 ENSG00000183784 chromosome 9 open reading frame 66
35225432 226470 - GC09M000225



36227212 229378 - GC09M000227



37245417 245450 + GC09P000245



38252825 275616 - LOC105375946
Exon structure

105375946 ENSG00000235880
39242104 294418 - GC09M000242



40333518 333553 + GC09P000333



41214854 465259 + DOCK8
Exon structure
Hs.132599 81704 ENSG00000107099 dedicator of cytokinesis 8
42354139 354166 + PIR47887
Exon structure




43355801 364395 - LOC105375945
Exon structure

105375945

44452492 492248 - LOC105375944
Exon structure

105375944 ENSG00000227155
45477750 478423 + RPL12P25
Exon structure

100270926 ENSG00000235330 ribosomal protein L12 pseudogene 25
46487774 495610 + ENSG00000228115
Exon structure


ENSG00000228115
47500270 501493 + FAM217AP1
Exon structure

100133062
family with sequence similarity 217, member A pseudogene 1
48500662 504242 - LOC105375947
Exon structure

105375947

49503057 504746 - GC09M000503



50507258 507553 - GC09M000509



51535932 540968 - GC09M000535



52547317 549531 + ENSG00000226403
Exon structure


ENSG00000226403
53558826 558930 + RNU6-1327P
Exon structure

106481599 ENSG00000202172 RNA, U6 small nuclear 1327, pseudogene
54558829 558930 + GC09P000558



55470291 746106 + KANK1
Exon structure
Hs.306764 23189 ENSG00000107104 KN motif and ankyrin repeat domains 1
56659986 660326 + EIF1P1
Exon structure

100505855 ENSG00000229875 eukaryotic translation initiation factor 1 pseudogene 1
57673478 685555 - ENSG00000227914
Exon structure


ENSG00000227914
58746996 763189 - LOC105375948
Exon structure

105375948

59774692 774723 + GC09P000774



60805236 826756 - LOC105375949
Exon structure

105375949

61841647 969090 + DMRT1
Exon structure
Hs.98586 1761 ENSG00000137090 doublesex and mab-3 related transcription factor 1
62908608 946416 - GC09M000908



63927110 928802 + GC09P000927



64932349 932375 + PIR40320
Exon structure




65941184 955083 + GC09P000941



66971472 971501 - PIR60936
Exon structure




67971523 971552 - PIR33633
Exon structure




68972812 972841 + PIR36801
Exon structure




69972910 972939 - PIR46442
Exon structure




70972971 972998 - PIR53361
Exon structure




71973339 973371 + GC09P000979



72973339 973371 + PIR56215
Exon structure




73973532 973559 + PIR39039
Exon structure




74973993 974020 + PIR49791
Exon structure




75974020 974048 + PIR37086
Exon structure




76971948 976558 - LOC105375950
Exon structure

105375950

77974188 974410 + GC09P000980



78975548 983384 + GC09P000982



79976964 991736 + DMRT3
Exon structure
Hs.189174; Hs.672740 58524 ENSG00000064218 doublesex and mab-3 related transcription factor 3
80998326 998353 - PIR35120
Exon structure




81998759 998790 + PIR46494
Exon structure




82998805 998835 - PIR32380
Exon structure




831001858 1001963 - RNU6-1073P
Exon structure

106481518 ENSG00000252991 RNA, U6 small nuclear 1073, pseudogene
841011085 1011799 + ENSG00000228783
Exon structure


ENSG00000228783
851003242 1057554 + DMRT2
Exon structure
Hs.59506 10655 ENSG00000173253 doublesex and mab-3 related transcription factor 2
861045625 1048641 + LINC01230
Exon structure

102800446 ENSG00000281769 long intergenic non-protein coding RNA 1230
871094076 1096569 + GC09P001094



881151807 1152140 - ENSG00000224836
Exon structure


ENSG00000224836
891164414 1164867 - RPS27AP14
Exon structure

100271378 ENSG00000236594 ribosomal protein S27a pseudogene 14
901320119 1320232 + GC09P001320



911328664 1328987 + ENSG00000233575
Exon structure


ENSG00000233575
921333837 1333953 + RNA5SP279
Exon structure

100873532 ENSG00000202383 RNA, 5S ribosomal pseudogene 279
931333836 1333953 + GC09P001336



941346956 1359033 - GC09M001346



951368544 1395220 + GC09P001368



961368548 1395222 + GC09P001369



971298290 1489023 + LOC102723803
Exon structure

102723803

981492862 1497487 + GC09P001492



991494826 1508964 - GC09M001494



1001505444 1508229 - GC09M001505



1011707205 1707239 + PIR59143
Exon structure




1021912498 1918715 - LOC105375953
Exon structure

105375953

1031927369 1930259 - LOC105375952
Exon structure

105375952

1041948313 1962500 + LOC105375951
Exon structure

105375951

1051954272 1967229 + GC09P001954



1061954276 1967231 + GC09P001955



1071977784 1978547 - ENSG00000224092
Exon structure


ENSG00000224092
1082022170 2022884 + GC09P002022



1092041900 2046023 - ENSG00000236199
Exon structure


ENSG00000236199
1102042994 2046019 + GC09P002042



1112082438 2083739 - GC09M002082



1122090852 2094668 + GC09P002090



1132100708 2101976 + GC09P002102



1142100708 2101976 + GC09P002101



1152100708 2101978 + GC09P002100



1162015219 2193624 + SMARCA2
Exon structure
Hs.298990 6595 ENSG00000080503 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
1172162763 2162953 - RNU2-25P
Exon structure

106480208 ENSG00000222973 RNA, U2 small nuclear 25, pseudogene
1182162762 2162953 - GC09M002162



1192192967 2193572 - GC09M002192



1202228961 2229241 - RN7SL592P
Exon structure

106481851 ENSG00000264615 RNA, 7SL, cytoplasmic 592, pseudogene
1212243775 2246216 + LOC105375954
Exon structure

105375954

1222289117 2296883 + LOC105375955
Exon structure

105375955

1232297641 2297674 + PIR32198
Exon structure




1242407793 2431600 + LOC105375956
Exon structure

105375956

1252423858 2494223 - LOC101930053
Exon structure

101930053

1262494265 2507110 - LOC101930048
Exon structure

101930048

1272422702 2643359 - VLDLR-AS1
Exon structure
Hs.416043 401491 ENSG00000236404 VLDLR antisense RNA 1
1282541097 2541635 + ENSG00000231052
Exon structure


ENSG00000231052
1292596552 2626860 + GC09P002596



1302639898 2639927 + PIR48978
Exon structure




1312621679 2660053 + VLDLR
Exon structure
Hs.370422 7436 ENSG00000147852 very low density lipoprotein receptor
1322652927 2667976 - LOC105375957
Exon structure

105375957

1332708470 2722635 + GC09P002708



1342715909 2718334 - GC09M002715



1352717239 2730037 + KCNV2
Exon structure
Hs.622675; Hs.740173 169522 ENSG00000168263 potassium channel, voltage gated modifier subfamily V, member 2
1362759058 2759084 - PIR50784
Exon structure




1372759256 2760832 - GC09M002760



1382720469 2844241 - PUM3
Exon structure
Hs.493309 9933 ENSG00000080608 pumilio RNA-binding family member 3
1392844364 2845906 + GC09P002844



1402875387 2876503 - GPS2P1
Exon structure

392281 ENSG00000236496 G protein pathway suppressor 2 pseudogene 1
1412900240 2900846 - ATP5HP2
Exon structure

138234 ENSG00000229184 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, pseudogene 2
1422900320 2900804 - GC09M002902



1432924321 2924407 - ENSG00000221450
Exon structure


ENSG00000221450
1442907073 3053408 - CARM1P1
Exon structure

100130873 ENSG00000227835 coactivator-associated arginine methyltransferase 1 pseudogene 1
1453157329 3157359 + GC09P003158



1463181589 3200500 + LINC01231
Exon structure

101929247 ENSG00000236511 long intergenic non-protein coding RNA 1231
1473194304 3196066 - LOC105375959
Exon structure

105375959

1483198916 3203621 - LOC105375958
Exon structure

105375958

1493218302 3223008 - GC09M003218



1503364329 3364792 - ENSG00000215297
Exon structure


ENSG00000215297
1513218297 3526004 - RFX3
Exon structure
Hs.136829 5991 ENSG00000080298 regulatory factor X, 3 (influences HLA class II expression)
1523267036 3563080 + GC09P003267



1533451797 3451816 + GC09P003451



1543452305 3453987 - ENSG00000279745
Exon structure


ENSG00000279745
1553463947 3467001 + LOC105375961
Exon structure

105375961

1563471983 3472099 + GC09P003471



1573475418 3475448 + PIR60517
Exon structure




1583479874 3481237 + GC09P003480



1593548681 3549736 + GC09P003548



1603550376 3551512 + GC09P003550



1613552597 3553312 + GC09P003552



1623526723 3691814 + RFX3-AS1
Exon structure

101929302 ENSG00000232104 RFX3 antisense RNA 1
1633647335 3648338 + ENSG00000237359
Exon structure


ENSG00000237359
1643651506 3651546 - PIR36675
Exon structure




1653663427 3665653 + LOC105375960
Exon structure

105375960

1663684076 3689626 - ENSG00000226669
Exon structure


ENSG00000226669
1673791783 3802626 + LOC105375962
Exon structure

105375962

1683806395 3809509 + LOC105375963
Exon structure

105375963

1693816259 3816289 + PIR41950
Exon structure




1703834330 3847738 - GC09M003834



1713850822 3855669 + GC09P003850



1723875584 3878809 + ENSG00000236724
Exon structure


ENSG00000236724
1733898642 3901248 + GLIS3-AS1
Exon structure
Hs.676113 84850 ENSG00000237009 GLIS3 antisense RNA 1
1743971801 3994658 + LOC105375964
Exon structure

105375964

1754003528 4004173 + GC09P004003



1764030682 4062673 + GC09P004030



1774030686 4062675 + GC09P004031



1784070906 4071884 - ENSG00000230001
Exon structure


ENSG00000230001
1794084558 4084712 + GC09P004084



1804083800 4087923 - GC09M004083



1813824127 4348392 - GLIS3
Exon structure
Hs.162125 169792 ENSG00000107249 GLIS family zinc finger 3
1824164351 4164513 + GC09P004164