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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 9

   GeneLoc map region (15,342 - 4,193,624 bp) around gene/marker "SMARCA2"

   Explanation:
   SMARCA2 is located at 2,015,342-2,193,624 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
118648 18676 + PIR38329
Exon structure




214474 29259 - GC09M000020



314511 29739 - WASH1
Exon structure
Hs.461200; Hs.585931 100287171 ENSG00000181404 WAS protein family homolog 1
430144 30281 + MIR1302-11
Exon structure

100422919 ENSG00000227518 microRNA 1302-11
527657 30891 + GC09P000032



634394 35864 - FAM138C
Exon structure
Hs.744304 654835 ENSG00000218839 family with sequence similarity 138, member C
745152 73764 - GC09M000045



852452 73323 - ENSG00000144140
Exon structure


ENSG00000144140
965612 65771 - GC09M000065



1065637 65771 + GC09P000070



1172701 88826 + ENSG00000225655
Exon structure


ENSG00000225655
1283154 83197 - GC09M000083



13100804 102941 - RP11-143M1.3
Exon structure

101929179 ENSG00000227917
14101002 109842 - GC09M000107



15112716 113754 - ENSG00000231808
Exon structure


ENSG00000231808
16114005 114034 + PIR58570
Exon structure




17113606 115772 - GC09M000113



18114832 114862 + GC09P000120



19114832 114862 + PIR36916
Exon structure




20115067 115097 + GC09P000119



21115067 115097 + PIR48620
Exon structure




22116234 118417 - FOXD4
Exon structure
Hs.584759 2298 ENSG00000170122 forkhead box D4
23117507 117825 - GC09M000123



24117507 117825 - GC09M000124



25121052 173366 - GC09M000125



26151205 151323 + GC09P000154



27121038 188979 - CBWD1
Exon structure
Hs.645337; Hs.531330 55871 ENSG00000172785 COBW domain containing 1
28155841 155874 + GC09P000155



29161205 161238 + GC09P000161



30213108 215893 - C9orf66
Exon structure
Hs.190877 157983 ENSG00000183784 chromosome 9 open reading frame 66
31243921 243954 + GC09P000243



32245417 245450 + GC09P000245



33258807 258840 + GC09P000258



34267966 273002 - ENSG00000235880
Exon structure


ENSG00000235880
35333518 333553 + GC09P000333



36214854 465259 + DOCK8
Exon structure
Hs.132599 81704 ENSG00000107099 dedicator of cytokinesis 8
37354139 354166 + PIR47887
Exon structure




38372901 372934 + GC09P000372



39449087 449120 + GC09P000449



40463555 465247 + GC09P000463



41454304 492112 - ENSG00000227155
Exon structure


ENSG00000227155
42470592 484491 + GC09P000473



43477750 478423 + RPL12P25
Exon structure

100270926 ENSG00000235330 ribosomal protein L12 pseudogene 25
44487774 495610 + ENSG00000228115
Exon structure


ENSG00000228115
45500270 501493 + FAM217AP1
Exon structure

100133062
family with sequence similarity 217, member A pseudogene 1
46503057 504746 - GC09M000506



47507258 507553 - RN7SL412P
Exon structure

hugo1188 ENSG00000264949 RNA, 7SL, cytoplasmic 412, pseudogene
48547317 549531 + ENSG00000226403
Exon structure


ENSG00000226403
49558826 558930 + ENSG00000202172
Exon structure


ENSG00000202172
50558829 558930 + GC09P000561



51470291 746105 + KANK1
Exon structure
Hs.306764 23189 ENSG00000107104 KN motif and ankyrin repeat domains 1
52659986 660326 + EIF1P1
Exon structure

100505855 ENSG00000229875 eukaryotic translation initiation factor 1 pseudogene 1
53673478 685555 - ENSG00000227914
Exon structure


ENSG00000227914
54684272 710948 + GC09P000690



55684274 710948 + GC09P000691



56746431 751056 + GC09P000746



57752722 755507 - GC09M000753



58747413 761551 - GC09M000749



59774689 774723 + GC09P000774



60817755 817785 + GC09P000817



61870316 870351 + GC09P000870



62887108 887143 + GC09P000887



63841690 969090 + DMRT1
Exon structure
Hs.98586 1761 ENSG00000137090 doublesex and mab-3 related transcription factor 1
64932349 932375 + PIR40320
Exon structure




65969208 969500 + GC09P000994



66971472 971501 - PIR60936
Exon structure




67971523 971552 - PIR33633
Exon structure




68972812 972841 + PIR36801
Exon structure




69972910 972939 - PIR46442
Exon structure




70972971 972998 - PIR53361
Exon structure




71973339 973371 + GC09P000997



72973339 973371 + PIR56215
Exon structure




73973532 973559 + PIR39039
Exon structure




74973993 974020 + PIR49791
Exon structure




75974020 974048 + PIR37086
Exon structure




76974188 974410 + GC09P000999



77977136 990093 + GC09P000995



78977138 990093 + GC09P000996



79976964 991732 + DMRT3
Exon structure
Hs.189174; Hs.672740 58524 ENSG00000064218 doublesex and mab-3 related transcription factor 3
80998326 998353 - PIR35120
Exon structure




81998759 998790 + PIR46494
Exon structure




82998805 998835 - PIR32380
Exon structure




831001858 1001963 - ENSG00000252991
Exon structure


ENSG00000252991
841011085 1011799 + ENSG00000228783
Exon structure


ENSG00000228783
851041219 1042520 - GC09M001043



861045426 1049242 + GC09P001061



871050354 1051622 + GC09P001058



881050354 1051622 + GC09P001059



891050354 1051622 + GC09P001060



901050346 1057554 + DMRT2
Exon structure
Hs.59506 10655 ENSG00000173253 doublesex and mab-3 related transcription factor 2
911151807 1152140 - ENSG00000224836
Exon structure


ENSG00000224836
921164414 1164867 - RPS27AP14
Exon structure

100271378 ENSG00000236594 ribosomal protein S27a pseudogene 14
931197148 1197178 + GC09P001197



941298276 1328584 + GC09P001302



951320119 1320232 + GC09P001325



961328664 1328987 + ENSG00000233575
Exon structure


ENSG00000233575
971333837 1333953 + RNA5SP279
Exon structure

100873532 ENSG00000202383 RNA, 5S ribosomal pseudogene 279
981333836 1333953 + GC09P001338



991354235 1368400 + GC09P001354



1001707205 1707239 + PIR42097
Exon structure




1011713183 1713303 + GC09P001716



1021741348 1741381 + GC09P001742



1031633518 1929562 + GC09P001633



1041874843 1874873 + GC09P001874



1051917165 1930573 - GC09M001920



1061925411 1930258 + GC09P001925



1071977784 1978547 - ENSG00000224092
Exon structure


ENSG00000224092
1082001764 2002409 + GC09P002001



1092015341 2047332 + GC09P002020



1102015343 2047332 + GC09P002021



1112041900 2046023 - ENSG00000236199
Exon structure


ENSG00000236199
1122042994 2046019 + GC09P002043



1132015342 2193624 + SMARCA2
Exon structure
Hs.298990 6595 ENSG00000080503 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
1142162762 2162953 - GC09M002165



1152162763 2162953 - ENSG00000222973
Exon structure


ENSG00000222973
1162168220 2168257 + GC09P002168



1172177761 2177793 + GC09P002177



1182192966 2193572 - GC09M002196



1192215555 2215586 - GC09M002215



1202228963 2229241 - RN7SL592P
Exon structure

hugo1384 ENSG00000264615 RNA, 7SL, cytoplasmic 592, pseudogene
1212213894 2293037 + GC09P002216



1222264485 2274167 + GC09P002264



1232297641 2297674 + PIR32198
Exon structure




1242311340 2311357 - GC09M002311



1252392802 2392831 - GC09M002392



1262390027 2429986 + GC09P002390



1272410352 2410386 + GC09P002410



1282422702 2641395 - VLDLR-AS1
Exon structure
Hs.416043 401491 ENSG00000236404 VLDLR antisense RNA 1
1292422702 2641395 - LOC101930053
Exon structure

101930053 ENSG00000236404
1302422702 2641395 - LOC101930048
Exon structure

101930048 ENSG00000236404
1312541097 2541635 + ENSG00000231052
Exon structure


ENSG00000231052
1322639898 2639927 + PIR48978
Exon structure




1332621793 2660053 + VLDLR
Exon structure
Hs.370422 7436 ENSG00000147852 very low density lipoprotein receptor
1342683510 2704737 - GC09M002686



1352715908 2718334 - GC09M002718



1362717502 2730037 + KCNV2
Exon structure
Hs.622675; Hs.740173 169522 ENSG00000168263 potassium channel, subfamily V, member 2
1372759058 2759084 - PIR50784
Exon structure




1382759256 2760832 - GC09M002763



1392763773 2771317 + GC09P002766



1402720469 2844241 - KIAA0020
Exon structure
Hs.493309 9933 ENSG00000080608 KIAA0020
1412779834 2797685 - GC09M002782



1422804167 2807974 - GC09M002804



1432840592 2844073 + GC09P002845



1442844364 2845906 + GC09P002844



1452875387 2876503 - GPS2P1
Exon structure

392281 ENSG00000236496 G protein pathway suppressor 2 pseudogene 1
1462900240 2900846 - ATP5HP2
Exon structure

138234 ENSG00000229184 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, pseudogene 2
1472900320 2900804 - GC09M002902



1482924323 2924410 - ENSG00000221450
Exon structure


ENSG00000221450
1492907073 3053408 - CARM1P1
Exon structure

100130873 ENSG00000227835 coactivator-associated arginine methyltransferase 1 pseudogene 1
1503157329 3157359 + GC09P003158



1513181589 3198517 + LINC01231
Exon structure

101929247 ENSG00000236511 long intergenic non-protein coding RNA 1231
1523218302 3223008 - GC09M003221



1533321113 3321147 + GC09P003321



1543364329 3364792 - ENSG00000215297
Exon structure


ENSG00000215297
1553218297 3526004 - RFX3
Exon structure
Hs.136829 5991 ENSG00000080298 regulatory factor X, 3 (influences HLA class II expression)
1563451797 3451816 + GC09P003454



1573452305 3469181 - ENSG00000203286
Exon structure


ENSG00000203286
1583465055 3465990 + DSERG1
Exon structure
Hs.650787 751816
Down syndrome encephalopathy related protein 1 (est)
1593471983 3472099 + GC09P003474



1603475418 3475448 + PIR60517
Exon structure




1613479874 3481237 + GC09P003483



1623548681 3549736 + GC09P003548



1633550376 3551512 + GC09P003550



1643552597 3553312 + GC09P003552



1653526723 3671646 + RP11-509J21.1
Exon structure

101929302 ENSG00000232104
1663647335 3648338 + ENSG00000237359
Exon structure


ENSG00000237359
1673651506 3651546 - PIR36675
Exon structure




1683674546 3691814 + ENSG00000235326
Exon structure


ENSG00000235326
1693684076 3689626 - ENSG00000226669
Exon structure


ENSG00000226669
1703735770 3735803 + GC09P003735



1713810494 3810520 + PIR42492
Exon structure




1723816259 3816289 + PIR41950
Exon structure




1733863117 3863356 + GC09P003865



1743875584 3878809 + ENSG00000236724
Exon structure


ENSG00000236724
1753898642 3901248 + GLIS3-AS1
Exon structure
Hs.676113 84850 ENSG00000237009 GLIS3 antisense RNA 1
1763932360 4081361 - GC09M003932



1773937094 4081301 - GC09M003940



1784070906 4071884 - ENSG00000230001
Exon structure


ENSG00000230001
1794084558 4084712 + GC09P004087



1803824127 4348392 - GLIS3
Exon structure
Hs.162125 169792 ENSG00000107249 GLIS family zinc finger 3
1814164351 4164513 + GC09P004167



1824118744 4298496 - GC09M004129



1834118744 4299594 - GC09M004128



1844118744 4299594 - GC09M004130