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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 9

   GeneLoc map region (122,964,856 - 126,991,905 bp) around gene/marker "LHX6"

   Explanation:
   LHX6 is located at 124,964,856-124,991,905 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
1123005680 123005775 - GC09M123015



2123007257 123007328 - MIR147A
Exon structure

406939 ENSG00000207814 microRNA 147a
3123067044 123067073 + GC09P123069



4123067083 123067114 + GC09P123067



5123067153 123067188 + GC09P123068



6123151473 123163297 - GC09M123152



7123178978 123179099 + GC09P123181



8123151147 123342448 - CDK5RAP2
Exon structure
Hs.269560 55755 ENSG00000136861 CDK5 regulatory subunit associated protein 2
9123257449 123257478 + GC09P123259



10123257488 123257519 + GC09P123257



11123257758 123257787 + GC09P123258



12123266538 123266566 + PIR42824
Exon structure




13123267203 123267229 - PIR33352
Exon structure




14123290104 123301398 - GC09M123290



15123334025 123342448 - GC09M123334



16123342229 123342255 - PIR42935
Exon structure




17123384996 123385023 - PIR45570
Exon structure




18123363091 123476765 - MEGF9
Exon structure
Hs.744903 1955 ENSG00000106780 multiple EGF-like-domains 9
19123482951 123484250 + AHCYP2
Exon structure

392387 ENSG00000238181 adenosylhomocysteinase pseudogene 2
20123509177 123509209 - GC09M123509



21123514256 123555740 - FBXW2
Exon structure
Hs.494985 26190 ENSG00000119402 F-box and WD repeat domain containing 2
22123550294 123555658 - GC09M123550



23123555358 123555385 - PIR59216
Exon structure




24123555791 123561034 + GC09P123556



25123555775 123561848 + LOC100288842
Exon structure
Hs.706815 100288842 ENSG00000214654 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 pseudogene (est)
26123567281 123567309 + PIR33146
Exon structure




27123574753 123575123 - ENSG00000270917
Exon structure


ENSG00000270917
28123588873 123593679 - GC09M123588



29123577774 123605262 - PSMD5
Exon structure
Hs.193725 5711 ENSG00000095261 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
30123587106 123616651 + PSMD5-AS1
Exon structure
Hs.594170 253039 ENSG00000226752 PSMD5 antisense RNA 1 (head to head)
31123605755 123605785 + GC09P123617



32123605755 123605785 + PIR34779
Exon structure




33123614148 123614178 + GC09P123615



34123614148 123614178 + PIR56908
Exon structure




35123616580 123616608 + PIR42449
Exon structure




36123620472 123622824 - GC09M123620



37123623389 123625304 - GC09M123623



38123626357 123631142 - GC09M123626



39123617931 123639606 - PHF19
Exon structure
Hs.460124 26147 ENSG00000119403 PHD finger protein 19
40123664671 123691451 - TRAF1
Exon structure
Hs.531251 7185 ENSG00000056558 TNF receptor-associated factor 1
41123714613 123812554 - C5
Exon structure
Hs.494997 727 ENSG00000106804 complement component 5
42123787974 123797104 - GC09M123787



43123837141 123939888 + CNTRL
Exon structure
Hs.653263 11064 ENSG00000119397 centriolin
44123920864 123923783 + GC09P123920



45123949238 123949265 - PIR40575
Exon structure




46123940415 123985292 - RAB14
Exon structure
Hs.371563 51552 ENSG00000119396 RAB14, member RAS oncogene family
47123965437 123965712 + RN7SL181P
Exon structure

hugo936 ENSG00000243738 RNA, 7SL, cytoplasmic 181, pseudogene
48123970072 124027464 + GC09P123972



49124000395 124002367 - LOC645482
Exon structure

645482 ENSG00000214651
50123970072 124095121 + GSN
Exon structure
Hs.522373 2934 ENSG00000148180 gelsolin
51124042141 124045008 - ENSG00000239593
Exon structure


ENSG00000239593
52124043046 124047808 - GSN-AS1
Exon structure

57000 ENSG00000235865 GSN antisense RNA 1
53124053715 124057566 - GC09M124057



54124088826 124088854 + PIR41790
Exon structure




55124103625 124110410 + ENSG00000267987
Exon structure


ENSG00000267987
56124101353 124132545 - STOM
Exon structure
Hs.253903 2040 ENSG00000148175 stomatin
57124134516 124135460 - GC09M124134



58124137519 124214455 + ENSG00000227355
Exon structure


ENSG00000227355
59124207269 124262306 - GGTA1P
Exon structure
Hs.97469 2681 ENSG00000204136 glycoprotein, alpha-galactosyltransferase 1 pseudogene
60124256797 124257097 + RN7SL187P
Exon structure

hugo942 ENSG00000240299 RNA, 7SL, cytoplasmic 187, pseudogene
61124269749 124270292 + GC09P124269



62124282095 124282703 - HMGB1P37
Exon structure

100132863 ENSG00000213467 high mobility group box 1 pseudogene 37
63124302155 124302241 + ENSG00000252940
Exon structure


ENSG00000252940
64124337170 124338493 - ENSG00000229854
Exon structure


ENSG00000229854
65124413964 124441124 + GC09P124413



66124329336 124547809 + DAB2IP
Exon structure
Hs.522378 153090 ENSG00000136848 DAB2 interacting protein
67124513251 124519355 + GC09P124513



68124522572 124522599 + PIR48142
Exon structure




69124526106 124526132 + PIR31642
Exon structure




70124552806 124552836 - GC09M124552



71124577953 124581731 - ENSG00000261534
Exon structure


ENSG00000261534
72124584246 124585139 - GC09M124585



73124602311 124602445 + GC09P124607



74124646890 124725998 - TTLL11-IT1
Exon structure
Hs.644347 401550 ENSG00000237548 TTLL11 intronic transcript 1 (non-protein coding)
75124584204 124855885 - TTLL11
Exon structure
Hs.640663 158135 ENSG00000175764 tubulin tyrosine ligase-like family, member 11
76124850637 124854033 + GC09P124850



77124882361 124882446 - MIR4478
Exon structure

100616312 ENSG00000266583 microRNA 4478
78124894745 124922098 - NDUFA8
Exon structure
Hs.495039 4702 ENSG00000119421 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa
79124925827 124926040 + GC09P124926



80124922190 124962367 + MORN5
Exon structure
Hs.71428 254956 ENSG00000185681 MORN repeat containing 5
81124964856 124991905 - LHX6
Exon structure
Hs.103137 26468 ENSG00000106852 LIM homeobox 6
82124999903 125027143 - RBM18
Exon structure
Hs.415842 92400 ENSG00000119446 RNA binding motif protein 18
83125018212 125018309 + ENSG00000272317
Exon structure


ENSG00000272317
84125026882 125085743 + MRRF
Exon structure
Hs.368011 92399 ENSG00000148187 mitochondrial ribosome recycling factor
85125061389 125061642 - RN7SL227P
Exon structure

hugo986 ENSG00000264227 RNA, 7SL, cytoplasmic 227, pseudogene
86125085003 125085032 + PIR46978
Exon structure




87125086886 125086916 + PIR62540
Exon structure




88125086886 125086916 + GC09P125091



89125086887 125087594 + ENSG00000269979
Exon structure


ENSG00000269979
90125089077 125089105 + PIR42770
Exon structure




91125093146 125093622 + ENSG00000270102
Exon structure


ENSG00000270102
92125134884 125135104 + ENSG00000269970
Exon structure


ENSG00000269970
93125132824 125157982 + PTGS1
Exon structure
Hs.201978 5742 ENSG00000095303 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
94125148344 125148928 - ENSG00000269738
Exon structure


ENSG00000269738
95125163249 125165185 - ENSG00000233616
Exon structure


ENSG00000233616
96125168155 125168197 + GC09P125168



97125165686 125211256 + ENSG00000229245
Exon structure


ENSG00000229245
98125226304 125231465 + GC09P125230



99125233637 125238096 + ENSG00000231465
Exon structure


ENSG00000231465
100125239288 125240205 - OR1J1
Exon structure
Hs.632692 347168 ENSG00000136834 olfactory receptor, family 1, subfamily J, member 1
101125262153 125262179 - PIR39690
Exon structure




102125273081 125274019 + OR1J2
Exon structure
Hs.460145 26740 ENSG00000197233 olfactory receptor, family 1, subfamily J, member 2
103125281420 125282358 + OR1J4
Exon structure
Hs.632679 26219 ENSG00000239590 olfactory receptor, family 1, subfamily J, member 4
104125288640 125289572 - OR1N1
Exon structure
Hs.553604 138883 ENSG00000171505 olfactory receptor, family 1, subfamily N, member 1
105125297921 125297951 + GC09P125298



106125315491 125316438 + OR1N2
Exon structure
Hs.632682 138882 ENSG00000171501 olfactory receptor, family 1, subfamily N, member 2
107125329830 125330756 - OR1L8
Exon structure
Hs.632695 138881 ENSG00000171496 olfactory receptor, family 1, subfamily L, member 8
108125370143 125371076 + OR1H1P
Exon structure

26742 ENSG00000228914 olfactory receptor, family 1, subfamily H, member 1 pseudogene
109125377017 125377958 + OR1Q1
Exon structure
Hs.684864 158131 ENSG00000165202 olfactory receptor, family 1, subfamily Q, member 1
110125383612 125383641 + GC09P125383



111125372194 125401964 + ENSG00000234156
Exon structure


ENSG00000234156
112125390861 125391814 - OR1B1
Exon structure
Hs.553710 347169 ENSG00000171484 olfactory receptor, family 1, subfamily B, member 1
113125423995 125424924 + OR1L1
Exon structure
Hs.567736 26737 ENSG00000173679 olfactory receptor, family 1, subfamily L, member 1
114125437409 125438380 + OR1L3
Exon structure
Hs.626839 26735 ENSG00000171481 olfactory receptor, family 1, subfamily L, member 3
115125448212 125450710 + TLK1P1
Exon structure

100129793 ENSG00000226783 tousled-like kinase 1 pseudogene 1
116125486269 125487201 + OR1L4
Exon structure
Hs.626838 254973 ENSG00000136939 olfactory receptor, family 1, subfamily L, member 4
117125512127 125513059 + OR1L6
Exon structure
Hs.553790 392390 ENSG00000171459 olfactory receptor, family 1, subfamily L, member 6
118125524123 125524935 + SKA2P1
Exon structure

729012 ENSG00000232387 spindle and kinetochore associated complex subunit 2 pseudogene 1
119125546600 125547600 + GC09P125546



120125551212 125552171 + OR5C1
Exon structure
Hs.534761 392391 ENSG00000148215 olfactory receptor, family 5, subfamily C, member 1
121125562402 125563349 + OR1K1
Exon structure
Hs.632681 392392 ENSG00000165204 olfactory receptor, family 1, subfamily K, member 1
122125560668 125590935 - PDCL
Exon structure
Hs.271749 5082 ENSG00000136940 phosducin-like
123125578331 125579531 - GC09M125581



124125599786 125601170 + KRT18P67
Exon structure

100631239 ENSG00000233425 keratin 18 pseudogene 67
125125606835 125610773 - GC09M125613



126125609509 125609535 - GC09M125614



127125611908 125611936 - PIR53418
Exon structure




128125612078 125613848 - GC09M125615



129125614242 125614273 + GC09P125614



130125628737 125628769 - GC09M125628



131125606835 125667620 - RC3H2
Exon structure
Hs.533499 54542 ENSG00000056586 ring finger and CCCH-type domains 2
132125642492 125642602 - SNORD90
Exon structure
Hs.693253 692206 ENSG00000212447 small nucleolar RNA, C/D box 90
133125642491 125642602 - GC09M125647



134125655225 125655252 - PIR42233
Exon structure




135125652449 125667559 - GC09M125652



136125666634 125666970 + GC09P125671



137125670335 125675609 - ZBTB6
Exon structure
Hs.654596 10773 ENSG00000186130 zinc finger and BTB domain containing 6
138125677845 125693779 - ZBTB26
Exon structure
Hs.5638 57684 ENSG00000171448 zinc finger and BTB domain containing 26
139125693949 125702640 + GC09P125693



140125699902 125702612 + LOC101928954
Exon structure

101928954 ENSG00000261094
141125702833 125703718 - GC09M125702



142125708267 125708373 - ENSG00000222351
Exon structure


ENSG00000222351
143125703299 125748695 + GC09P125704



144125752442 125758599 + GC09P125752



145125703112 125867147 + RABGAP1
Exon structure
Hs.271341 23637 ENSG00000011454 RAB GTPase activating protein 1
146125791652 125792032 - GC09M125793



147125791611 125792096 - RPS25P8
Exon structure

100131196 ENSG00000213216 ribosomal protein S25 pseudogene 8
148125796806 125797975 + GPR21
Exon structure
Hs.722039 2844 ENSG00000188394 G protein-coupled receptor 21
149125819813 125819845 - GC09M125821



150125819851 125819882 - GC09M125819



151125819893 125819921 - GC09M125820



152125824124 125825591 - LOC100422501
Exon structure

100422501 ENSG00000225078
153125851831 125860032 + GC09P125851



154125873825 125873922 - MIR600
Exon structure

693185 ENSG00000236901 microRNA 600
155125872951 125872980 - GC09M125984



156125872951 125872980 - PIR38879
Exon structure




157125873824 125873922 - GC09M125975



158125874686 125874716 - GC09M125985



159125874686 125874726 - PIR45965
Exon structure




160125874695 125874726 - GC09M125977



161125871773 125877756 - MIR600HG
Exon structure
Hs.708072 81571 ENSG00000236901 MIR600 host gene (non-protein coding)
162125874778 125874808 - PIR45975
Exon structure




163125874778 125874808 - GC09M125986



164125874895 125874924 - PIR57287
Exon structure




165125875074 125875104 - PIR33429
Exon structure




166125875074 125875104 - GC09M125981



167125875621 125875652 - PIR41614
Exon structure




168125875621 125875652 - GC09M125983



169125875773 125875803 - PIR57175
Exon structure




170125875773 125875803 - GC09M125979



171125875819 125875848 - PIR49760
Exon structure




172125875843 125875873 - GC09M125962



173125875843 125875873 - PIR47660
Exon structure




174125876051 125876081 - PIR44235
Exon structure




175125876051 125876081 - GC09M125976



176125876561 125876587 - PIR52613
Exon structure




177125877943 125877969 - PIR53233
Exon structure




178125878015 125878045 - GC09M125982



179125878015 125878048 - PIR43672
Exon structure




180125878018 125878048 - GC09M125978



181125871773 125884502 - GC09M125987



182125881088 125881118 - PIR44660
Exon structure




183125881088 125881118 - GC09M125980



184125885545 125885637 + GC09P125888



185125871779 126030855 - STRBP
Exon structure
Hs.694157 55342 ENSG00000165209 spermatid perinuclear RNA binding protein
186126062833 126063134 - GC09M126062



187126100687 126102254 - GC09M126100



188126118501 126118604 + GC09P126125



189126118501 126118604 + GC09P126126



190126118448 126142603 + CRB2
Exon structure
Hs.710092 286204 ENSG00000148204 crumbs family member 2
191126137915 126141006 - GC09M126137



192126142597 126142625 - PIR42030
Exon structure




193126163510 126163616 + GC09P126166



194126163827 126165852 - GC09M126163



195126164804 126164882 - MIR601
Exon structure

693186 ENSG00000207991 microRNA 601
196126168730 126168965 + GC09P126170



197126254163 126255435 + ENSG00000237336
Exon structure


ENSG00000237336
198126347663 126347736 - ENSG00000222722
Exon structure


ENSG00000222722
199126392675 126414570 - GC09M126392



200126141933 126692431 - DENND1A
Exon structure
Hs.744995 57706 ENSG00000119522 DENN/MADD domain containing 1A
201126480470 126480586 + GC09P126485



202126498716 126514220 + ENSG00000230826
Exon structure


ENSG00000230826
203126517968 126517996 + PIR57991
Exon structure




204126521499 126522054 + ENSG00000229115
Exon structure


ENSG00000229115
205126605315 126605965 + GC09P126608



206126605212 126606159 + PIGFP2
Exon structure

100422349 ENSG00000234881 phosphatidylinositol glycan anchor biosynthesis, class F, pseudogene 2
207126692793 126693497 + GC09P126692



208126705121 126705296 + GC09P126708



209126716495 126716526 - GC09M126716



210126758547 126761785 - GC09M126758



211126762454 126763637 + GC09P126766



212126768556 126771675 - LOC100505588
Exon structure
Hs.547168 100505588 ENSG00000236668 Uncharacterized LOC100505588 (est)
213126772809 126773393 + ENSG00000231227
Exon structure


ENSG00000231227
214126774114 126777641 + GC09P126781



215126763949 126795580 + LHX2
Exon structure
Hs.696425 9355 ENSG00000106689 LIM homeobox 2
216126793903 126794803 - ENSG00000234921
Exon structure


ENSG00000234921
217126966157 126966460 - GC09M126966