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  Chromosome 6

   GeneLoc map region (0 - 3,614,132 bp) around gene/marker "FOXC1"

   Explanation:
   FOXC1 is located at 1,610,681-1,614,132 bp

    [ GeneLoc Home Page ]


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#
Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
177358 81728 + GC06P000078



2100134 101639 + GC06P000101



3105922 106856 - OR4F1P
Exon structure

26685 ENSG00000220212 olfactory receptor, family 4, subfamily F, member 1 pseudogene
4130802 134855 - GC06M000136



5131910 144885 - LINC00266-3
Exon structure

441123 ENSG00000170590 long intergenic non-protein coding RNA 266-3
6142272 144067 + LOC646070
Exon structure

646070

7145637 145906 + GC06P000150



8155135 156639 + ENSG00000234823
Exon structure


ENSG00000234823
9167607 170631 - ENSG00000218577
Exon structure


ENSG00000218577
10168170 172220 - GC06M000169



11169949 171400 + GC06P000171



12184372 184398 + PIR60404
Exon structure




13183913 187741 + GC06P000185



14181466 205484 - ENSG00000263667
Exon structure


ENSG00000263667
15203313 206392 + FLJ43763
Exon structure
Hs.629679 642316 ENSG00000205653 Uncharacterized LOC642316 (est)
16224950 226400 + ENSG00000224179
Exon structure


ENSG00000224179
17229546 229576 - PIR44572
Exon structure




18230931 237179 + GC06P000232



19277863 286279 - GC06M000278



20320303 320329 + PIR42293
Exon structure




21292097 351355 + DUSP22
Exon structure
Hs.29106 56940 ENSG00000112679 dual specificity phosphatase 22
22348115 348141 + PIR35740
Exon structure




23348198 348225 + PIR49830
Exon structure




24350247 354323 - GC06M000351



25355564 355594 - PIR52831
Exon structure




26372197 372224 + PIR48751
Exon structure




27372245 372271 - PIR47067
Exon structure




28372331 372361 - PIR37517
Exon structure




29376493 376519 + PIR61905
Exon structure




30383120 383631 - GC06M000384



31391739 411447 + IRF4
Exon structure
Hs.401013 3662 ENSG00000137265 interferon regulatory factor 4
32444486 444818 + GC06P000447



33444523 444855 + GC06P000446



34446960 446986 - PIR55434
Exon structure




35481969 482301 + GC06P000482



36524171 525581 + ENSG00000230433
Exon structure


ENSG00000230433
37485133 693117 - EXOC2
Exon structure
Hs.484412 55770 ENSG00000112685 exocyst complex component 2
38607651 607680 - PIR54847
Exon structure




39655939 656964 - HUS1B
Exon structure
Hs.669039 135458 ENSG00000188996 HUS1 checkpoint homolog b (S. pombe)
40659952 660284 + GC06P000660



41669080 670307 - LOC100421511
Exon structure

100421511 ENSG00000219712
42698398 699222 - GC06M000702



43698595 699419 - GC06M000701



44698708 699532 - GC06M000700



45698901 699725 - GC06M000699



46693956 713766 + GC06P000694



47709104 711405 - GC06M000710



48729098 729313 + GC06P000739



49729313 729528 + GC06P000737



50729415 729630 + GC06P000735



51729067 730060 - GC06M000730



52729462 729677 + GC06P000736



53729608 729823 + GC06P000738



54735951 736775 - GC06M000736



55766665 766880 + GC06P000767



56775455 780214 - GC06M000776



57800156 804829 + GC06P000801



58837719 841882 + GC06P000838



59903562 907511 - GC06M000903



60905462 909594 - ENSG00000260982
Exon structure


ENSG00000260982
61909969 909999 + PIR34123
Exon structure




62910086 910113 - PIR41244
Exon structure




63914197 915021 - GC06M000915



64944913 945128 + GC06P000945



65958562 962511 - GC06M000960



66996096 996125 - PIR33232
Exon structure




67994884 1017334 - GC06M000994



68995238 1017704 - GC06M000995



691003321 1017334 - GC06M001004



701003694 1017704 - GC06M001003



711015974 1020137 + GC06P001016



721019089 1019431 - GC06M001020



731019117 1019459 - GC06M001021



741019458 1019801 - GC06M001019



75958563 1101567 - LOC285768
Exon structure
Hs.209463 285768 ENSG00000229796 Uncharacterized LOC285768 (est)
761032127 1054576 - GC06M001032



771040885 1054576 - GC06M001040



781056330 1056673 - GC06M001056



791059226 1061269 - GC06M001060



801059611 1061631 - GC06M001059



811060089 1063404 - GC06M001061



821062457 1064477 - GC06M001062



831080164 1105181 + ENSG00000176515
Exon structure


ENSG00000176515
841096103 1096924 + GC06P001096



851096409 1097216 + GC06P001097



861096479 1098522 - GC06M001096



871097260 1100722 + GC06P001098



881108576 1112186 + GC06P001109



891134223 1135287 - GC06M001134



901135921 1139323 + GC06P001136



911149677 1153133 + GC06P001152



921150035 1153536 + GC06P001150



931150398 1153860 + GC06P001151



941160982 1164597 + GC06P001163



951161362 1164971 + GC06P001165



961161725 1165334 + GC06P001164



971162085 1190338 - GC06M001162



981186753 1186855 + ENSG00000238438
Exon structure


ENSG00000238438
991186622 1187678 - GC06M001186



1001187015 1188075 - GC06M001187



1011146342 1228905 - GC06M001146



1021187370 1188434 - GC06M001188



1031186739 1190195 + GC06P001190



1041188312 1192467 + GC06P001192



1051198049 1201663 + GC06P001199



1061203692 1205430 + GC06P001204



1071206217 1206440 + GC06P001207



1081198411 1226587 - GC06M001198



1091213595 1217579 + GC06P001214



1101210562 1233001 - GC06M001210



1111223622 1224684 - GC06M001223



1121219323 1233001 - GC06M001219



1131225316 1228718 + GC06P001226



1141234756 1235098 - GC06M001234



1151235683 1238964 + GC06P001237



1161236225 1239504 + GC06P001236



1171208638 1269198 - GC06M001208



1181093032 1385301 - GC06M001093



1191239868 1240654 - GC06M001239



1201241472 1244748 + GC06P001242



1211266663 1270636 + GC06P001268



1221267090 1271076 + GC06P001267



1231272215 1275491 + GC06P001273



1241272321 1276307 + GC06P001274



1251274919 1276939 - GC06M001274



1261261701 1321962 - GC06M001261



1271262133 1322691 - GC06M001262



1281292426 1293205 + GC06P001293



1291267360 1327558 - GC06M001267



1301303075 1307061 + GC06P001304



1311311715 1312486 + GC06P001313



1321312675 1314993 + FOXQ1
Exon structure
Hs.591352 94234 ENSG00000164379 forkhead box Q1
1331323680 1325095 - GC06M001323



1341324752 1328031 + GC06P001325



1351321762 1333590 - GC06M001321



1361298114 1359404 - GC06M001298



1371331632 1331659 + PIR53094
Exon structure




1381333418 1335417 - GC06M001333



1391355611 1359597 + GC06P001356



1401369124 1372586 + GC06P001370



1411350651 1410862 - GC06M001350



1421380440 1384050 + GC06P001381



1431384025 1385301 - ENSG00000261730
Exon structure


ENSG00000261730
1441386143 1388143 - GC06M001387



1451386907 1388906 - GC06M001386



1461390069 1395832 + FOXF2
Exon structure
Hs.484423 2295 ENSG00000137273 forkhead box F2
1471406087 1407151 - GC06M001406



1481407785 1411187 + GC06P001408



1491423400 1425665 - GC06M001424



1501441746 1443745 - GC06M001442



1511454594 1457873 + GC06P001455



1521474836 1477102 - GC06M001475



1531485461 1489445 + GC06P001486



1541489677 1490173 + GC06P001492



1551507557 1507851 + ENSG00000243439
Exon structure


ENSG00000243439
1561496349 1519554 + GC06P001497



1571480504 1541067 - GC06M001481



1581512576 1515524 - ELF2P2
Exon structure

260335 ENSG00000218027 E74-like factor 2 pseudogene 2
1591490480 1546716 + GC06P001491



1601520254 1527642 + GC06P001520



1611521015 1528405 + GC06P001521



1621557339 1564729 + GC06P001558



1631548085 1588575 - GC06M001550



1641575418 1582804 + GC06P001577



1651566816 1606556 - GC06M001566



1661575443 1608879 + GC06P001576



1671585164 1624902 - GC06M001585



1681605723 1607305 + GC06P001605



1691610789 1611211 + GC06P001618



1701610789 1611214 + GC06P001617



1711610896 1611214 + GC06P001616



1721610681 1614132 + FOXC1
Exon structure
Hs.348883 2296 ENSG00000054598 forkhead box C1
1731612576 1614127 + GC06P001615



1741603264 1642995 - GC06M001603



1751696863 1696891 - PIR36904
Exon structure




1761727168 1729106 - GC06M001728



1771739434 1746752 + GC06P001740



1781782162 1782415 + GC06P001784



1791767196 1806933 - GC06M001768



1801887519 1905355 + GC06P001889



1811888250 1906085 + GC06P001890



1821887519 1907505 + GC06P001891



1831888250 1908235 + GC06P001888



1841900321 1900347 - PIR38406
Exon structure




1851931749 1933685 - GC06M001933



1861932479 1934415 - GC06M001932



1871624041 2245926 - GMDS
Exon structure
Hs.144496; Hs.660919 2762 ENSG00000112699 GDP-mannose 4,6-dehydratase
1881926891 1944728 + GC06P001927



1891926891 1946878 + GC06P001928



1901948759 1949249 - GC06M001952



1911949488 1949978 - GC06M001951



1921950462 1952398 - GC06M001953



1931942684 1960520 + GC06P001943



1941942684 1962670 + GC06P001942



1951967472 1967962 - GC06M001968



1961971121 1973057 - GC06M001972



1971976469 1979473 - GC06M001977



1981976468 1994306 + GC06P001977



1991976468 1996456 + GC06P001978



2001986913 1988849 - GC06M001987



2012003922 2004412 - GC06M002004



2022020702 2022638 - GC06M002021



2032037711 2038201 - GC06M002038



2042106665 2124499 + GC06P002108



2052106665 2126649 + GC06P002107



2062150890 2152826 - GC06M002151



2072167899 2168389 - GC06M002168



2082244110 2245808 + GC06P002255



2092246058 2264362 + GC06P002252



2102246086 2270247 + GC06P002253



2112259532 2273651 - GC06M002260



2122272910 2273285 - GC06M002272



2132246088 2367549 + GC06P002254



2142318134 2324833 + GC06P002318



2152306526 2352936 + GC06P002306



2162245981 2413825 + HMGN2P28
Exon structure

100128372 ENSG00000236086 high mobility group nucleosomal binding domain 2 pseudogene 28
2172245982 2413825 + ENSG00000250903
Exon structure


ENSG00000250903
2182336692 2342363 + GC06P002336



2192356965 2362624 + GC06P002357



2202370338 2376003 + GC06P002370



2212396414 2396687 + GC06P002398



2222403916 2409577 + GC06P002403



2232409770 2409869 - ENSG00000266252
Exon structure


ENSG00000266252
2242429590 2434145 - GC06M002430



2252435148 2435586 - GC06M002436



2262437380 2441546 - GC06M002439



2272438652 2442818 - GC06M002438



2282462234 2462260 + PIR61847
Exon structure




2292461379 2467591 + GC06P002461



2302462676 2468881 + GC06P002463



2312468675 2473229 - GC06M002469



2322476463 2480630 - GC06M002477



2332482082 2486639 - GC06M002483



2342489874 2494044 - GC06M002490



2352500578 2500606 + PIR59473
Exon structure




2362500481 2506686 + GC06P002501



2372515661 2520218 - GC06M002516



2382523452 2527623 - GC06M002524



2392529778 2530001 - GC06M002530



2402531261 2533089 - GC06M002533



2412536689 2542360 + GC06P002536



2422547502 2553758 + GC06P002547



2432562180 2564377 - GC06M002564



2442570006 2570229 - GC06M002572



2452571489 2573317 - GC06M002573



2462582168 2585234 + GC06P002582



2472584898 2586733 - GC06M002585



2482615166 2615390 - GC06M002617



2492616733 2618227 - GC06M002618



2502617459 2618250 + GC06P002617



2512622147 2635298 - C6orf195
Exon structure
Hs.680574 154386 ENSG00000164385 chromosome 6 open reading frame 195
2522637170 2640235 + ENSG00000228718
Exon structure


ENSG00000228718
2532639001 2639029 + PIR55810
Exon structure




2542652777 2653215 - GC06M002654



2552658223 2658492 - GC06M002658



2562656281 2660447 - GC06M002659



2572661006 2676634 + GC06P002661



2582670919 2671188 - GC06M002671



2592680309 2686514 + GC06P002680



2602663863 2751200 - MYLK4
Exon structure
Hs.127830 340156 ENSG00000145949 myosin light chain kinase family, member 4
2612701358 2716888 + GC06P002701



2622713996 2729520 + GC06P002713



2632724339 2725518 + GC06P002724



2642732711 2733890 + GC06P002732



2652749422 2765826 - ENSG00000251499
Exon structure


ENSG00000251499
2662761726 2764356 + GC06P002761



2672765513 2765541 + PIR54135
Exon structure




2682769771 2770950 + GC06P002769



2692765648 2786927 + WRNIP1
Exon structure
Hs.236828 56897 ENSG00000124535 Werner helicase interacting protein 1
2702771261 2783599 - GC06M002773



2712783576 2800199 - GC06M002784



2722791676 2808296 - GC06M002791



2732791141 2822143 - GC06M002792



2742799889 2821743 - GC06M002801



2752811903 2813365 + GC06P002811



2762812683 2821649 - GC06M002812



2772818785 2819964 + GC06P002818



2782826291 2827170 + GC06P002826



2792830080 2830867 + GC06P002830



2802834388 2835267 + GC06P002834



2812835533 2835745 - GC06M002835



2822836631 2837423 + GC06P002836



2832828800 2845430 - GC06M002828



2842832566 2842240 - SERPINB1
Exon structure
Hs.381167 1992 ENSG00000021355 serpin peptidase inhibitor, clade B (ovalbumin), member 1
2852838179 2838966 + GC06P002838



2862839498 2842231 + GC06P002839



2872843632 2843844 - GC06M002843



2882847595 2850328 + GC06P002847



2892840911 2857517 - GC06M002840



2902854265 2854341 - MIR4645
Exon structure

100616285 ENSG00000266750 microRNA 4645
2912858398 2858424 - PIR43328
Exon structure




2922859257 2860044 + GC06P002859



2932862126 2862966 + GC06P002862



2942864710 2864922 - GC06M002864



2952854891 2876744 - MGC39372
Exon structure
Hs.8162 221756 ENSG00000230438 Serpin peptidase inhibitor, clade B (ovalbumin), member 9 pseudogene (est)
2962868673 2871404 + GC06P002868



2972871551 2872430 + GC06P002871



2982875340 2876127 + GC06P002875



2992879925 2879953 + PIR60730
Exon structure




3002880793 2881005 - GC06M002880



3012883634 2884513 + GC06P002883



3022877746 2894368 - GC06M002878



3032884757 2887488 + GC06P002889



3042887423 2888210 + GC06P002887



3052880256 2895790 + GC06P002880



3062884221 2900909 + GC06P002888



3072884221 2900910 + GC06P002886



3082892876 2893088 - GC06M002894



3092887500 2903545 - SERPINB9
Exon structure
Hs.104879 5272 ENSG00000170542 serpin peptidase inhibitor, clade B (ovalbumin), member 9
3102896839 2899570 + GC06P002896



3112899246 2900910 + GC06P002900



3122910847 2912347 - ENSG00000232999
Exon structure


ENSG00000232999
3132917128 2917967 + ENSG00000228365
Exon structure


ENSG00000228365
3142920456 2921335 + GC06P002921



3152924245 2925032 + GC06P002925



3162929698 2929910 - GC06M002930



3172933658 2936387 + GC06P002943



3182940610 2943240 + GC06P002944



3192940297 2956709 - GC06M002941



3202948659 2949838 + GC06P002950



3212953383 2953413 - PIR46440
Exon structure




3222948368 2964788 - GC06M002949



3232948393 2972090 - SERPINB6
Exon structure
Hs.519523 5269 ENSG00000124570 serpin peptidase inhibitor, clade B (ovalbumin), member 6
3242965322 2967412 - GC06M002969



3252968703 2971151 + GC06P002969



3262973391 2975481 - GC06M002974



3272976772 2979214 + GC06P002977



3282988201 2991405 + DKFZP686I15217
Exon structure
Hs.720158 401232 ENSG00000244041 Uncharacterized LOC401232 (est)
3292985531 3001955 - GC06M002985



3302989960 2999368 - ENSG00000224846
Exon structure


ENSG00000224846
3312996333 2997316 - GC06M002996



3322996333 2998986 - GC06M002998



3332997195 2998997 - GC06M002999



3343001122 3001994 + GC06P003004



3352988221 3019996 + NQO2
Exon structure
Hs.533050; Hs.145597 4835 ENSG00000124588 NAD(P)H dehydrogenase, quinone 2
3362993298 3018206 + GC06P003003



3372997615 3014028 - GC06M002997



3383010569 3012659 - GC06M003010



3393001362 3023034 + GC06P003002



3403007657 3024280 - GC06M003007



3413020390 3025005 - HTATSF1P2
Exon structure
Hs.744511; Hs.441039 401233
HIV-1 Tat specific factor 1 pseudogene 2
3423022645 3024735 - GC06M003023



3433025025 3027659 + ENSG00000261015
Exon structure


ENSG00000261015
3443026026 3028470 + GC06P003027



3453034405 3050818 - GC06M003037



3463040681 3047375 + GC06P003040



3473045618 3046034 + FAM136BP
Exon structure

387071 ENSG00000232654 family with sequence similarity 136, member B, pseudogene
3483049069 3049468 + SERPINB8P1
Exon structure

11029 ENSG00000217707 serpin peptidase inhibitor, clade B8 (ovalbumin) pseudogene 1
3493038542 3063437 + GC06P003038



3503051334 3052317 - GC06M003052



3513051335 3053998 - ENSG00000233763
Exon structure


ENSG00000233763
3523054155 3054942 + GC06P003054



3533056211 3056237 + PIR47178
Exon structure




3543056124 3056995 + ENSG00000229282
Exon structure


ENSG00000229282
3553059608 3059820 - GC06M003060



3563059437 3061527 - GC06M003061



3573062818 3065264 + GC06P003066



3583063571 3066298 + GC06P003065



3593076965 3077179 + GC06P003077



3603076991 3078808 - GC06M003077



3613081111 3082067 + GC06P003082



3623088920 3089043 - RNA5SP201
Exon structure

100873462 ENSG00000222248 RNA, 5S ribosomal pseudogene 201
3633089175 3090131 + GC06P003089



3643064092 3115421 + RIPK1
Exon structure
Hs.519842 8737 ENSG00000137275 receptor (TNFRSF)-interacting serine-threonine kinase 1
3653087408 3112321 + GC06P003088



3663110288 3111244 + GC06P003110



3673113223 3113249 + PIR43479
Exon structure




3683127976 3140989 - GC06M003128



3693118925 3153432 + GC06P003120



3703118608 3153812 + BPHL
Exon structure
Hs.10136 670 ENSG00000137274 biphenyl hydrolase-like (serine hydrolase)
3713137609 3152773 + GC06P003139



3723138628 3153296 - ENSG00000228170
Exon structure


ENSG00000228170
3733150252 3152439 - GC06M003152



3743150252 3152439 + GC06P003151



3753154102 3155126 - GC06M003158



3763154103 3155126 - GC06M003159



3773154859 3155103 + GC06P003158



3783153900 3157783 - TUBB2A
Exon structure
Hs.654543 7280 ENSG00000137267 tubulin, beta 2A class IIa
3793164344 3180755 - GC06M003165



3803177273 3179998 - TUBB2BP1
Exon structure

100132153 ENSG00000216819 tubulin, beta 2B class IIb pseudogene 1
3813182978 3196001 - LOC100507194
Exon structure
Hs.678053 100507194 ENSG00000230269 Uncharacterized LOC100507194 (est)
3823189365 3191455 - GC06M003189



3833192746 3195198 + GC06P003193



3843224717 3225366 - GC06M003236



3853224519 3225718 - GC06M003240



3863224729 3225561 - GC06M003239



3873224793 3225714 - GC06M003238



3883224729 3225962 - GC06M003241



3893224729 3226015 - GC06M003244



3903225527 3226504 - GC06M003237



3913225542 3226494 - GC06M003242



3923224495 3231964 - TUBB2B
Exon structure
Hs.300701 347733 ENSG00000137285 tubulin, beta 2B class IIb
3933224534 3234804 + GC06P003226



3943217333 3242211 + GC06P003219



3953232923 3233572 - GC06M003243



3963232740 3243013 + GC06P003232



3973254722 3257639 + GC06P003257



3983255349 3258407 + GC06P003260



3993258995 3262269 + GC06P003259



4003263979 3264008 + PIR45758
Exon structure




4013261779 3266383 - GC06M003262



4023231637 3303607 + PSMG4
Exon structure
Hs.207069; Hs.731726 389362 ENSG00000180822 proteasome (prosome, macropain) assembly chaperone 4
4033268306 3268333 + PIR34454
Exon structure




4043266749 3270475 + GC06P003267



4053269918 3269944 - PIR47461
Exon structure




4063271844 3272493 - GC06M003274



4073269985 3274708 - GC06M003273



4083271661 3281933 + GC06P003272



4093292898 3293112 + GC06P003293



4103302701 3305285 - GC06M003304



4113305106 3306062 + GC06P003307



4123306122 3309396 + GC06P003309



4133308175 3308204 + PIR62094
Exon structure




4143308906 3313510 - GC06M003310



4153313876 3314670 + GC06P003314



4163318978 3319627 - GC06M003319



4173321302 3321331 - PIR53779
Exon structure




4183318795 3329068 + GC06P003319



4193329027 3329317 - GC06M003330



4203355550 3356530 + GC06P003356



4213356040 3360644 - GC06M003358



4223361010 3361804 + GC06P003362



4233269196 3457256 - SLC22A23
Exon structure
Hs.713588 63027 ENSG00000137266 solute carrier family 22, member 23
4243364552 3364842 - GC06M003365



4253381592 3383155 - GC06M003382



4263385991 3389262 + GC06P003385



4273382788 3397082 + GC06P003383



4283399751 3401315 - GC06M003400



4293400948 3404884 + GC06P003402



4303407251 3409588 + GC06P003408



4313409764 3413119 - GC06M003410



4323429652 3429942 - GC06M003430



4333435316 3436880 - GC06M003436



4343436513 3450803 + GC06P003437



4353448890 3449539 - GC06M003449



4363448707 3458979 + GC06P003448



4373455936 3461032 + GC06P003457



4383460972 3463309 + GC06P003461



4393463422 3464986 - GC06M003465



4403463485 3466840 - GC06M003466



4413468303 3469867 - GC06M003469



4423464619 3478886 + GC06P003465



4433469500 3483790 + GC06P003469



4443476797 3480072 + GC06P003476



4453481234 3481564 - GC06M003481



4463479582 3484305 - GC06M003480



4473489055 3491392 + GC06P003490



4483491568 3494923 - GC06M003492



4493493959 3496296 + GC06P003494



4503496472 3499827 - GC06M003497



4513500401 3501965 - GC06M003501



4523501598 3515891 + GC06P003502



4533514594 3514622 + PIR56392
Exon structure




4543526060 3528395 + GC06P003527



4553528571 3531926 - GC06M003529



4563539479 3569980 - GC06M003540



4573591245 3592810 - GC06M003592



4583592443 3606743 + GC06P003594



4593594480 3624981 - GC06M003598



4603594481 3720314 - LOC100507336
Exon structure
Hs.104944 100507336 ENSG00000228793 Uncharacterized LOC100507336 (est)