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  Chromosome 5

   GeneLoc map region (177,921,412 - 180,915,260 bp) around gene/marker "CNOT6"

   Explanation:
   CNOT6 is located at 179,921,412-180,005,405 bp

    [ GeneLoc Home Page ]


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#
Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
1177664617 178017556 - COL23A1
Exon structure
Hs.660026 91522 ENSG00000050767 collagen, type XXIII, alpha 1
2177938897 177938924 - PIR48624
Exon structure




3178029665 178057616 - CLK4
Exon structure
Hs.406557 57396 ENSG00000113240 CDC-like kinase 4
4178046729 178046999 - RN7SKP70
Exon structure

hugo709 ENSG00000252464 RNA, 7SK small nuclear pseudogene 70
5178089169 178089854 + VN2R2P
Exon structure

100033391
vomeronasal 2 receptor 2 pseudogene
6178121720 178134039 - GC05M178123



7178139393 178139419 - PIR45014
Exon structure




8178138522 178157703 - ZNF354A
Exon structure
Hs.484324 6940 ENSG00000169131 zinc finger protein 354A
9178193134 178193161 - PIR42964
Exon structure




10178197454 178197480 - PIR43686
Exon structure




11178199558 178199586 - PIR60108
Exon structure




12178216354 178216381 - PIR42333
Exon structure




13178191862 178245436 - AACSP1
Exon structure
Hs.382790 729522 ENSG00000250420 acetoacetyl-CoA synthetase pseudogene 1
14178191865 178245436 - GC05M178194



15178251378 178251406 - PIR37848
Exon structure




16178254264 178254290 - PIR33333
Exon structure




17178258110 178258136 - PIR32270
Exon structure




18178265688 178265718 + PIR56674
Exon structure




19178265688 178265718 + GC05P178270



20178267128 178267156 + PIR49034
Exon structure




21178267098 178268137 + LOC100129457
Exon structure

100129457 ENSG00000253725
22178286881 178286910 - PIR49665
Exon structure




23178286954 178315123 + ZNF354B
Exon structure
Hs.724051 117608 ENSG00000178338 zinc finger protein 354B
24178311715 178311880 + GC05P178314



25178311716 178311880 + RNU1-39P
Exon structure

hugo1728 ENSG00000206624 RNA, U1 small nuclear 39, pseudogene
26178336711 178337610 - LOC100422593
Exon structure

100422593 ENSG00000213328
27178322895 178360213 + ZFP2
Exon structure
Hs.654533 80108 ENSG00000198939 ZFP2 zinc finger protein
28178349021 178349915 + PIGFP1
Exon structure

5282 ENSG00000253869 phosphatidylinositol glycan anchor biosynthesis, class F, pseudogene 1
29178365678 178366224 - ENSG00000272431
Exon structure


ENSG00000272431
30178365677 178368084 - GC05M178370



31178368397 178368424 - PIR37938
Exon structure




32178368192 178393434 + ZNF454
Exon structure
Hs.259441 285676 ENSG00000178187 zinc finger protein 454
33178396391 178417117 + ENSG00000254035
Exon structure


ENSG00000254035
34178405328 178423207 - GRM6
Exon structure
Hs.248131 2916 ENSG00000113262 glutamate receptor, metabotropic 6
35178413539 178416282 - GC05M178415



36178424966 178425816 - LOC100288803
Exon structure

100288803 ENSG00000254158
37178450753 178462065 + ZNF879
Exon structure
Hs.445740 345462 ENSG00000234284 zinc finger protein 879
38178463624 178463650 + PIR62665
Exon structure




39178471585 178471615 + PIR34416
Exon structure




40178487416 178510538 + ZNF354C
Exon structure
Hs.272328 30832 ENSG00000177932 zinc finger protein 354C
41178509681 178510195 - ENSG00000253144
Exon structure


ENSG00000253144
42178604142 178604168 - PIR31099
Exon structure




43178537852 178772431 - ADAMTS2
Exon structure
Hs.23871 9509 ENSG00000087116 ADAM metallopeptidase with thrombospondin type 1 motif, 2
44178692034 178692060 - PIR51374
Exon structure




45178804532 178805762 - ENSG00000253163
Exon structure


ENSG00000253163
46178804506 178805866 + ENSG00000253979
Exon structure


ENSG00000253979
47178812820 178812993 - ENSG00000253617
Exon structure


ENSG00000253617
48178882416 178883096 + ENSG00000250674
Exon structure


ENSG00000250674
49178893834 178894126 - RN7SL71P
Exon structure

hugo1415 ENSG00000264205 RNA, 7SL, cytoplasmic 71, pseudogene
50178919039 178919158 - GC05M178925



51178930323 178945621 - LOC100128622
Exon structure

100128622 ENSG00000253652
52178949458 178952078 + LOC100289470
Exon structure

100289470 ENSG00000251545
53178954225 178954514 - ENSG00000253520
Exon structure


ENSG00000253520
54178999157 178999742 + PRDX2P3
Exon structure

100418943 ENSG00000249140 peroxiredoxin 2 pseudogene 3
55178977559 179037027 + RUFY1
Exon structure
Hs.306769 80230 ENSG00000176783 RUN and FYVE domain containing 1
56179013278 179013494 + GC05P179016



57179022905 179030742 - ENSG00000244945
Exon structure


ENSG00000244945
58179045625 179045885 + GC05P179049



59179041179 179061785 - HNRNPH1
Exon structure
Hs.604001 3187 ENSG00000169045 heterogeneous nuclear ribonucleoprotein H1 (H)
60179068545 179072047 - C5orf60
Exon structure
Hs.558748 285679 ENSG00000204661 chromosome 5 open reading frame 60
61179078291 179080227 + LOC100502572
Exon structure

100502572 ENSG00000228259
62179084763 179091433 + ENSG00000250999
Exon structure


ENSG00000250999
63179084762 179091433 + GC05P179086



64179105559 179107975 - CBY3
Exon structure
Hs.535767 646019 ENSG00000204659 chibby homolog 3 (Drosophila)
65179106033 179121816 + HMGB3P22
Exon structure

729595 ENSG00000225051 high mobility group box 3 pseudogene 22
66179105629 179158642 + CANX
Exon structure
Hs.567968 821 ENSG00000127022 calnexin
67179157167 179157228 + GC05P179160



68179159851 179223512 + MAML1
Exon structure
Hs.631951 9794 ENSG00000161021 mastermind-like 1 (Drosophila)
69179200791 179200820 + PIR32683
Exon structure




70179200791 179200820 + GC05P179202



71179203823 179204017 + GC05P179208



72179081528 179347229 - GC05M179083



73179220981 179223648 + LTC4S
Exon structure
Hs.706741 4056 ENSG00000213316 leukotriene C4 synthase
74179225278 179225346 - MIR1229
Exon structure

100302156 ENSG00000221394 microRNA 1229
75179224597 179233952 - MGAT4B
Exon structure
Hs.567419 11282 ENSG00000161013 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
76179233388 179265078 + SQSTM1
Exon structure
Hs.724025 8878 ENSG00000161011 sequestosome 1
77179250975 179251007 + PIR43055
Exon structure




78179263063 179263089 - PIR32850
Exon structure




79179263433 179263460 - PIR57524
Exon structure




80179263464 179263493 + PIR36293
Exon structure




81179263464 179263496 - PIR34873
Exon structure




82179263464 179263496 - GC05M179267



83179267557 179267584 + PIR46844
Exon structure




84179272832 179273152 + RN7SKP150
Exon structure

hugo505 ENSG00000222448 RNA, 7SK small nuclear pseudogene 150
85179274035 179274130 - ENSG00000252202
Exon structure


ENSG00000252202
86179274036 179274130 - GC05M179277



87179261436 179289173 - C5orf45
Exon structure
Hs.741169 51149 ENSG00000161010 chromosome 5 open reading frame 45
88179286013 179288283 + ENSG00000245317
Exon structure


ENSG00000245317
89179289066 179334859 - TBC1D9B
Exon structure
Hs.155829 23061 ENSG00000197226 TBC1 domain family, member 9B (with GRAM domain)
90179360775 179361226 - RPS15AP18
Exon structure

100271360 ENSG00000242979 ribosomal protein S15a pseudogene 18
91179366457 179367132 - ENSG00000249876
Exon structure


ENSG00000249876
92179390615 179391419 + ENSG00000249412
Exon structure


ENSG00000249412
93179404012 179404038 - PIR35962
Exon structure




94179338651 179499118 - RNF130
Exon structure
Hs.484363 55819 ENSG00000113269 ring finger protein 130
95179286012 179579934 + GC05P179290



96179442303 179442397 - MIR340
Exon structure

442908 ENSG00000198995 microRNA 340
97179442302 179442397 - GC05M179454



98179444621 179444706 - GC05M179455



99179503854 179503882 - PIR62172
Exon structure




100179505356 179508661 - GC05M179507



101179512607 179514055 - LOC646058
Exon structure

646058 ENSG00000253480
102179543983 179544013 - GC05M179545



103179543983 179544013 - PIR54796
Exon structure




104179527795 179636153 - RASGEF1C
Exon structure
Hs.190559 255426 ENSG00000146090 RasGEF domain family, member 1C
105179653333 179654000 - RPS8P7
Exon structure

646093 ENSG00000229721 ribosomal protein S8 pseudogene 7
106179684680 179685711 + LOC100419721
Exon structure

100419721 ENSG00000253908
107179660143 179719099 - MAPK9
Exon structure
Hs.484371 5601 ENSG00000050748 mitogen-activated protein kinase 9
108179713014 179713309 - GC05M179716



109179720245 179722253 + ENSG00000248367
Exon structure


ENSG00000248367
110179734230 179734258 - PIR49031
Exon structure




111179727690 179780387 - GFPT2
Exon structure
Hs.696497 9945 ENSG00000131459 glutamine-fructose-6-phosphate transaminase 2
112179857770 179857797 - PIR42519
Exon structure




113179859980 179860009 + PIR33360
Exon structure




114179868559 179870238 + ENSG00000250509
Exon structure


ENSG00000250509
115179871508 179871612 + GC05P179874



116179871509 179871612 + RNU6-525P
Exon structure

hugo2743 ENSG00000200555 RNA, U6 small nuclear 525, pseudogene
117179885869 179885897 + PIR50582
Exon structure




118179894885 179910503 + GC05P179896



119179960778 179961658 - LOC100329129
Exon structure

100329129 ENSG00000250749
120179921412 180005405 + CNOT6
Exon structure
Hs.608380 57472 ENSG00000113300 CCR4-NOT transcription complex, subunit 6
121180009445 180009530 + ENSG00000263759
Exon structure


ENSG00000263759
122180017103 180018540 - SCGB3A1
Exon structure
Hs.62492 92304 ENSG00000161055 secretoglobin, family 3A, member 1
123180030192 180030407 - GC05M180033



124180035518 180035548 - PIR50427
Exon structure




125180028506 180076624 - FLT4
Exon structure
Hs.646917 2324 ENSG00000037280 fms-related tyrosine kinase 4
126180098892 180099600 - LOC100420514
Exon structure

100420514 ENSG00000251352
127180103039 180103068 - PIR33532
Exon structure




128180104942 180104971 - PIR43656
Exon structure




129180110219 180110245 - PIR50842
Exon structure




130180110724 180110763 - PIR50790
Exon structure




131180110779 180110810 - PIR50386
Exon structure




132180110893 180110924 - PIR44918
Exon structure




133180111310 180111338 + PIR34062
Exon structure




134180111769 180111800 + PIR33244
Exon structure




135180111832 180111862 + GC05P180265



136180111832 180111866 + PIR57990
Exon structure




137180111871 180111901 + PIR42971
Exon structure




138180091992 180132503 + PIRC22
Exon structure

100313850
piwi-interacting RNA cluster 22
139180111766 180113546 + LOC100652782
Exon structure
Hs.131536 100652782 ENSG00000248717 Uncharacterized LOC100652782 (est)
140180112731 180112774 + PIR51222
Exon structure




141180112739 180112768 + GC05P180272



142180112768 180112800 + GC05P180262



143180112935 180112967 + PIR53588
Exon structure




144180112948 180112990 + GC05P180257



145180112948 180112991 + PIR55305
Exon structure




146180112960 180112989 + GC05P180273



147180112962 180112991 + GC05P180268



148180112980 180113009 + PIR41086
Exon structure




149180113351 180113402 + PIR62084
Exon structure




150180113362 180113391 + GC05P180275



151180113363 180113392 + GC05P180280



152180113363 180113393 + GC05P180276



153180113363 180113393 + GC05P180277



154180113363 180113394 + GC05P180278



155180113393 180113423 + PIR57584
Exon structure




156180113406 180113442 + GC05P180261



157180113406 180113448 + PIR41781
Exon structure




158180113462 180113492 + GC05P180266



159180113462 180113493 + GC05P180263



160180113462 180113495 + PIR40731
Exon structure




161180113480 180113510 + PIR49829
Exon structure




162180113502 180113545 + PIR31098
Exon structure




163180113578 180113608 + PIR51691
Exon structure




164180113589 180113620 + PIR34221
Exon structure




165180113664 180113697 + GC05P180255



166180113664 180113697 + PIR33364
Exon structure




167180113750 180113781 + GC05P180260



168180113750 180113781 + PIR39228
Exon structure




169180113850 180113881 + PIR61368
Exon structure




170180115638 180115668 + PIR46573
Exon structure




171180116265 180116294 + PIR57207
Exon structure




172180116304 180116334 + PIR40400
Exon structure




173180116850 180116880 + GC05P180264



174180116850 180116880 + PIR31276
Exon structure




175180119974 180120005 + PIR39363
Exon structure




176180119835 180120763 - OR2AI1P
Exon structure

134082 ENSG00000236791 olfactory receptor, family 2, subfamily AI, member 1 pseudogene
177180156585 180156732 + GC05P180253



178180156586 180156737 + RNU1-17P
Exon structure

100873814 ENSG00000199892 RNA, U1 small nuclear 17, pseudogene
179180166126 180167058 - OR2Y1
Exon structure
Hs.554719 134083 ENSG00000174339 olfactory receptor, family 2, subfamily Y, member 1
180180211782 180214869 - ENSG00000260841
Exon structure


ENSG00000260841
181180219023 180219049 - PIR38467
Exon structure




182180217541 180242652 - MGAT1
Exon structure
Hs.519818 4245 ENSG00000131446 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
183180237296 180238375 + GC05P180267



184180249059 180262726 + LINC00847
Exon structure
Hs.348292 729678 ENSG00000245060 long intergenic non-protein coding RNA 847
185180253815 180259101 - GC05M180263



186180256511 180256541 - PIR60076
Exon structure




187180261302 180262712 - GC05M180264



188180274611 180288286 - ZFP62
Exon structure
Hs.509227 643836 ENSG00000196670 ZFP62 zinc finger protein
189180336838 180336927 + ENSG00000222852
Exon structure


ENSG00000222852
190180326077 180377906 + BTNL8
Exon structure
Hs.189109 79908 ENSG00000113303 butyrophilin-like 8
191180372726 180372993 + RPS29P12
Exon structure

100131173 ENSG00000243664 ribosomal protein S29 pseudogene 12
192180394848 180395567 + LOC100419853
Exon structure

100419853 ENSG00000248761
193180394189 180397807 - LOC100128762
Exon structure

100128762 ENSG00000249287
194180396955 180396983 - PIR60486
Exon structure




195180409174 180414378 + LOC646227
Exon structure

646227 ENSG00000231228
196180415845 180433727 + BTNL3
Exon structure
Hs.225949 10917 ENSG00000168903 butyrophilin-like 3
197180434280 180434384 + GC05P180439



198180434281 180434384 + RNU6-1036P
Exon structure

hugo1993 ENSG00000206686 RNA, U6 small nuclear 1036, pseudogene
199180467225 180488523 + BTNL9
Exon structure
Hs.546502 153579 ENSG00000165810 butyrophilin-like 9
200180486171 180486200 + PIR56545
Exon structure




201180492086 180492680 + RPL13P10
Exon structure

100133108 ENSG00000241870 ribosomal protein L13 pseudogene 10
202180524070 180524142 + TRNAV2
Exon structure

7240
transfer RNA valine 2 (anticodon CAC)
203180524474 180524555 - TRNAL34
Exon structure

100189362
transfer RNA leucine 34 (anticodon AAG)
204180525777 180527878 - FOXO1B
Exon structure

2311 ENSG00000214295 forkhead box O1B pseudogene
205180528839 180528921 + GC05P180532



206180528840 180528921 + TRNAL24
Exon structure

100189273
transfer RNA leucine 24 (anticodon AAG)
207180529253 180529325 - TRNAV9
Exon structure

791232
transfer RNA valine 9 (anticodon CAC)
208180540930 180542674 + LOC729707
Exon structure

729707 ENSG00000248560
209180551360 180552304 - OR2V1
Exon structure
Hs.742585 26693 ENSG00000185372 olfactory receptor, family 2, subfamily V, member 1
210180581943 180582887 + OR2V2
Exon structure
Hs.553681 285659 ENSG00000182613 olfactory receptor, family 2, subfamily V, member 2
211180591154 180591226 + TRNAV5
Exon structure

100188990
transfer RNA valine 5 (anticodon AAC)
212180591564 180591645 - TRNAL43P
Exon structure

100189493
transfer RNA leucine 43 (anticodon AAG) pseudogene
213180596611 180596642 + PIR36996
Exon structure




214180596610 180596682 + TRNAV3
Exon structure

7241
transfer RNA valine 3 (anticodon AAC)
215180596609 180596682 + GC05P180599



216180600650 180600722 + TRNAV4
Exon structure

100189541
transfer RNA valine 4 (anticodon CAC)
217180601044 180601125 - TRNAL4
Exon structure

100189004
transfer RNA leucine 4 (anticodon AAG)
218180614701 180614782 + TRNAL32
Exon structure

100189328
transfer RNA leucine 32 (anticodon AAG)
219180615415 180615488 - GC05M180644



220180615416 180615488 - TRNAV10
Exon structure

100188992
transfer RNA valine 10 (anticodon AAC)
221180615455 180615488 - PIR54518
Exon structure




222180615854 180615925 - TRNAP3
Exon structure

7219
transfer RNA proline 3 (anticodon UGG)
223180618046 180618852 - TRNAT1
Exon structure

7236 ENSG00000248473 transfer RNA threonine 1 (anticodon UGU)
224180618686 180618758 - GC05M180646



225180618924 180621429 + ENSG00000250222
Exon structure


ENSG00000250222
226180620372 180620401 + PIR48234
Exon structure




227180622496 180630117 + LOC100507546
Exon structure
Hs.679609 100507546 ENSG00000250900 Uncharacterized LOC100507546 (est)
228180620924 180632293 - TRIM7
Exon structure
Hs.487412 81786 ENSG00000146054 tripartite motif containing 7
229180632360 180633120 - GC05M180647



230180632361 180633120 - ENSG00000248514
Exon structure


ENSG00000248514
231180633867 180633939 + GC05P180637



232180633868 180633939 + TRNAA26
Exon structure

100189280
transfer RNA alanine 26 (anticodon UGC)
233180633907 180633933 + PIR42038
Exon structure




234180634755 180634827 + TRNAK33
Exon structure

100189399
transfer RNA lysine 33 (anticodon CUU)
235180634461 180644800 - GC05M180643



236180645270 180645342 - TRNAV1
Exon structure

7239
transfer RNA valine 1 (anticodon AAC)
237180648979 180649051 - TRNAK2
Exon structure

790966
transfer RNA lysine 2 (anticodon CUU)
238180649395 180649467 - TRNAV6
Exon structure

100049614
transfer RNA valine 6 (anticodon CAC)
239180649566 180649633 - MIR4638
Exon structure

100616342 ENSG00000264732 microRNA 4638
240180650334 180650361 + PIR62653
Exon structure




241180651607 180651633 + PIR33457
Exon structure




242180651646 180657685 - ENSG00000247049
Exon structure


ENSG00000247049
243180649499 180662809 + TRIM41
Exon structure
Hs.700303; Hs.441488 90933 ENSG00000146063 tripartite motif containing 41
244180668814 180668892 - SNORD96A
Exon structure

619571 ENSG00000272296 small nucleolar RNA, C/D box 96A
245180668815 180668891 - GC05M180689



246180663909 180675096 - GNB2L1
Exon structure
Hs.5662 10399 ENSG00000204628 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
247180670311 180670379 - GC05M180691



248180670312 180670379 - SNORD95
Exon structure

619570 ENSG00000264549 small nucleolar RNA, C/D box 95
249180670794 180670903 - GC05M180688



250180672875 180679438 - GC05M180693



251180682146 180684315 - GC05M180692



252180682720 180684578 + ENSG00000268397
Exon structure


ENSG00000268397
253180681417 180688119 - TRIM52
Exon structure
Hs.458412 84851 ENSG00000183718 tripartite motif containing 52
254180673523 180699168 + ENSG00000233937
Exon structure


ENSG00000233937
255180688213 180699308 + TRIM52-AS1
Exon structure
Hs.725793 100507602 ENSG00000248275 TRIM52 antisense RNA 1 (head to head)
256180699423 180699450 - PIR36083
Exon structure




257180708376 180710653 + ENSG00000248103
Exon structure


ENSG00000248103
258180708366 180722209 + GC05P180710



259180728968 180729071 + RNU6-705P
Exon structure

hugo2929 ENSG00000222533 RNA, U6 small nuclear 705, pseudogene
260180733751 180733777 + PIR47307
Exon structure




261180737191 180737218 + PIR54633
Exon structure




262180746776 180747671 + GC05P180797



263180747760 180747791 + PIR36899
Exon structure




264180733670 180765812 + PIRC23
Exon structure

100313786
piwi-interacting RNA cluster 23
265180750916 180750945 + PIR56168
Exon structure




266180752297 180752336 + PIR45721
Exon structure




267180752306 180752336 + GC05P180795



268180750507 180755196 + LOC100132062
Exon structure
Hs.732199 100132062
Uncharacterized LOC100132062 (est)
269180755957 180756153 + GC05P180787



270180755957 180756153 + GC05P180788



271180755977 180756380 - CICP15
Exon structure

100507648
capicua transcriptional repressor pseudogene 15
272180758480 180758719 - GC05M180762



273180756242 180769214 + ENSG00000250765
Exon structure


ENSG00000250765
274180756405 180769122 + LOC100286914
Exon structure

100286914 ENSG00000250210
275180777136 180792134 + GC05P180793



276180794288 180795223 + OR4F3
Exon structure
Hs.722724 26683 ENSG00000230178 olfactory receptor, family 4, subfamily F, member 3
277180805696 180806039 - WBP1LP4
Exon structure

hugo3505 ENSG00000251035 WW domain binding protein 1-like pseudogene 4
278180856264 180867059 - GC05M180857



279180870049 180878010 - GC05M180872



280180878878 180878968 - ENSG00000256301
Exon structure


ENSG00000256301
281180878944 180882006 + GC05P180879



282180898962 180901521 + RPL23AP45
Exon structure

729764 ENSG00000213285 ribosomal protein L23a pseudogene 45
283180901132 180901159 + PIR51018
Exon structure