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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 4

   GeneLoc map region (53,095,264 - 57,164,414 bp) around gene/marker "PDGFRA"

   Explanation:
   PDGFRA is located at 55,095,264-55,164,414 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
153306660 53307701 - LOC100419861
Exon structure

100419861 ENSG00000251286
253330334 53330366 - GC04M053330



353330697 53330726 + GC04P053332



453330736 53330767 + GC04P053330



553331006 53331035 + GC04P053331



653361014 53361118 + GC04P053365



753361015 53361118 + ENSG00000199924
Exon structure


ENSG00000199924
853376179 53376282 + ENSG00000239068
Exon structure


ENSG00000239068
953457126 53525502 - USP46
Exon structure
Hs.7966 64854 ENSG00000109189 ubiquitin specific peptidase 46
1053492260 53494533 - GC04M053492



1153497276 53522753 - GC04M053497



1253522831 53527835 + USP46-AS1
Exon structure
Hs.631514 643783 ENSG00000248866 USP46 antisense RNA 1
1353552361 53552989 + GC04P053552



1453546776 53558816 + ENSG00000260120
Exon structure


ENSG00000260120
1553578483 53579126 - GC04M053582



1653578849 53578914 + MIR4449
Exon structure

100616436 ENSG00000264585 microRNA 4449
1753579406 53579537 + GC04P053592



1853579416 53579537 + SNORA26
Exon structure
Hs.635034 677810 ENSG00000212588 small nucleolar RNA, H/ACA box 26
1953578597 53586518 + DANCR
Exon structure
Hs.744077 57291 ENSG00000226950 differentiation antagonizing non-protein coding RNA
2053578425 53586827 + GC04P053593



2153586248 53586998 - ENSG00000248375
Exon structure


ENSG00000248375
2253588785 53617807 - ERVMER34-1
Exon structure
Hs.363087 100288413 ENSG00000226887 endogenous retrovirus group MER34, member 1
2353614303 53614426 + GC04P053617



2453614304 53614426 + ENSG00000212490
Exon structure


ENSG00000212490
2553617314 53617379 - ENSG00000266656
Exon structure


ENSG00000266656
2653625560 53645422 + GC04P053625



2753652703 53652803 + GC04P053655



2853652704 53652805 + ENSG00000199901
Exon structure


ENSG00000199901
2953656161 53681631 + RP11-752D24.3
Exon structure
Hs.383806 152578 ENSG00000250302 Uncharacterized LOC152578 (est)
3053727309 53728352 - GC04M053727



3153728676 53728702 - PIR51358
Exon structure




3253728457 53733002 + RASL11B
Exon structure
Hs.8035 65997 ENSG00000128045 RAS-like, family 11, member B
3353731498 53732916 - GC04M053731



3453811816 53824254 + ENSG00000248115
Exon structure


ENSG00000248115
3553859278 53859321 + GC04P053859



3653948934 53948960 - PIR32665
Exon structure




3753739149 54232242 - SCFD2
Exon structure
Hs.302287 152579 ENSG00000184178 sec1 family domain containing 2
3854006090 54006133 + GC04P054006



3954103219 54103249 - GC04M054103



4054105047 54105078 - GC04M054105



4154105088 54105117 - GC04M054106



4254105448 54105480 + GC04P054105



4354121592 54121622 - GC04M054121



4454121634 54121677 - GC04M054122



4554122383 54122412 - GC04M054123



4654122812 54122840 + PIR49161
Exon structure




4754122963 54122995 + GC04P054123



4854131628 54131734 - ENSG00000207385
Exon structure


ENSG00000207385
4954131627 54131734 - GC04M054135



5054308420 54319298 + GC04P054308



5154324718 54325569 + GC04P054324



5254327277 54330581 + GC04P054331



5354362567 54415745 + LNX1-AS1
Exon structure
Hs.662372 100873939 ENSG00000250930 LNX1 antisense RNA 1
5454425319 54425345 + PIR61049
Exon structure




5554441880 54442554 + ENSG00000173966
Exon structure


ENSG00000173966
5654325468 54567572 - LNX1
Exon structure
Hs.518760 84708 ENSG00000072201 ligand of numb-protein X 1, E3 ubiquitin protein ligase
5754459123 54470214 + LNX1-AS2
Exon structure
Hs.351074 100873955 ENSG00000248494 LNX1 antisense RNA 2
5854440224 54518644 - GC04M054440



5954525375 54603323 + RP11-317M11.1
Exon structure
Hs.636176 100506444 ENSG00000249341 Uncharacterized LOC100506444 (est)
6054596073 54598379 + GC04P054599



6154243810 55161439 + FIP1L1
Exon structure
Hs.624245 81608 ENSG00000145216 factor interacting with PAPOLA and CPSF1
6254766038 54783002 + ENSG00000249706
Exon structure


ENSG00000249706
6354793440 54794305 - LOC100129728
Exon structure

100129728 ENSG00000250815
6454851653 54853449 - RPL21P44
Exon structure
Hs.452943 402176 ENSG00000229585 ribosomal protein L21 pseudogene 44
6554863582 54863879 - ENSG00000272650
Exon structure


ENSG00000272650
6654863262 54868515 - GC04M054867



6754881959 54882241 + GC04P054885



6854886317 54886347 - GC04M054886



6954891355 54891385 - GC04M054891



7054898486 54898518 - GC04M054898



7154875956 54930857 - CHIC2
Exon structure
Hs.335393 26511 ENSG00000109220 cysteine-rich hydrophobic domain 2
7254914998 54930475 - GC04M054914



7354925764 54927377 + GC04P054931



7454927213 54927377 + ENSG00000269506
Exon structure


ENSG00000269506
7554942792 54943015 + ENSG00000251105
Exon structure


ENSG00000251105
7654953093 54953950 + GC04P054954



7754952852 54954618 + MORF4L2P1
Exon structure

643915 ENSG00000250147 mortality factor 4 like 2 pseudogene 1
7854965690 54968672 + GSX2
Exon structure
Hs.371899 170825 ENSG00000180613 GS homeobox 2
7954969747 54969823 - ENSG00000221219
Exon structure


ENSG00000221219
8054989267 54989371 - ENSG00000238753
Exon structure


ENSG00000238753
8155021128 55021169 + GC04P055021



8255087290 55087639 + RPL22P13
Exon structure

442108 ENSG00000242670 ribosomal protein L22 pseudogene 13
8355095457 55124947 + GC04P055103



8455095457 55124947 + GC04P055102



8555095264 55164414 + PDGFRA
Exon structure
Hs.74615 5156 ENSG00000134853 platelet-derived growth factor receptor, alpha polypeptide
8655142918 55144413 + GC04P055142



8755191215 55191258 - GC04M055191



8855192202 55192233 - GC04M055192



8955192243 55192272 - GC04M055193



9055192609 55192641 + GC04P055192



9155199059 55222121 + ENSG00000248184
Exon structure


ENSG00000248184
9255199037 55224233 + GC04P055200



9355242169 55242919 + ENSG00000248518
Exon structure


ENSG00000248518
9455306669 55312890 - ENSG00000251264
Exon structure


ENSG00000251264
9555470534 55470561 - PIR36071
Exon structure




9655469378 55473298 - LOC339978
Exon structure

339978 ENSG00000250456
9755500926 55500956 + PIR51098
Exon structure




9855500926 55500956 + GC04P055502



9955524085 55606881 + KIT
Exon structure
Hs.479754 3815 ENSG00000157404 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
10055625183 55625213 + PIR58416
Exon structure




10155637872 55637905 - GC04M055637



10255702327 55711568 - ENSG00000249727
Exon structure


ENSG00000249727
10355711734 55725407 + ENSG00000251256
Exon structure


ENSG00000251256
10455809796 55822985 + ENSG00000248317
Exon structure


ENSG00000248317
10555842282 55842564 - RPL38P3
Exon structure

100132311 ENSG00000244422 ribosomal protein L38 pseudogene 3
10655842326 55842538 - GC04M055844



10755877000 55877099 - ENSG00000264332
Exon structure


ENSG00000264332
10855898132 55898238 - ENSG00000252815
Exon structure


ENSG00000252815
10955929902 55930196 + RN7SL424P
Exon structure

hugo1201 ENSG00000244034 RNA, 7SL, cytoplasmic 424, pseudogene
11055935541 55935569 + PIR53985
Exon structure




11155919227 55958701 + ENSG00000250646
Exon structure


ENSG00000250646
11255944426 55991762 - KDR
Exon structure
Hs.479756 3791 ENSG00000128052 kinase insert domain receptor (a type III receptor tyrosine kinase)
11356043675 56044791 + GC04P056043



11456081793 56082079 - RN7SL822P
Exon structure

hugo1636 ENSG00000239545 RNA, 7SL, cytoplasmic 822, pseudogene
11556085511 56086140 + LOC100128865
Exon structure

100128865 ENSG00000250812
11656160657 56160765 + ENSG00000206839
Exon structure


ENSG00000206839
11756179178 56180091 - LRRC34P2
Exon structure

100420613 ENSG00000250464 leucine rich repeat containing 34 pseudogene 2
11856217979 56218575 - FCF1P8
Exon structure

100422531 ENSG00000251111 FCF1 pseudogene 8
11956219943 56219972 + PIR32131
Exon structure




12056212276 56239267 + SRD5A3
Exon structure
Hs.39311 79644 ENSG00000128039 steroid 5 alpha-reductase 3
12156230138 56262014 - SRD5A3-AS1
Exon structure
Hs.718667 100506462 ENSG00000249700 SRD5A3 antisense RNA 1
12256244392 56254858 + GC04P056247



12356254116 56254438 + ENSG00000273257
Exon structure


ENSG00000273257
12456262418 56263572 + GC04P056263



12556264559 56265055 + GC04P056265



12656277189 56277313 - ENSG00000203615
Exon structure


ENSG00000203615
12756278802 56278903 + GC04P056281



12856278803 56278905 + ENSG00000239040
Exon structure


ENSG00000239040
12956283858 56291893 + GC04P056283



13056287451 56289843 + LOC100506486
Exon structure
Hs.662149 100506486
Uncharacterized LOC100506486 (est)
13156262090 56319564 + TMEM165
Exon structure
Hs.479766 55858 ENSG00000134851 transmembrane protein 165
13256294611 56294637 - PIR45008
Exon structure




13356294073 56297591 - GC04M056307



13456298313 56298343 - PIR52615
Exon structure




13556298313 56298343 - GC04M056306



13656298643 56315593 - GC04M056308



13756294070 56413305 - CLOCK
Exon structure
Hs.436975 9575 ENSG00000134852 clock circadian regulator
13856367763 56367875 - GC04M056370



13956367762 56367875 - ENSG00000238585
Exon structure


ENSG00000238585
14056345014 56413048 - GC04M056345



14156406669 56407002 - RN7SKP30
Exon structure

hugo777 ENSG00000223305 RNA, 7SK small nuclear pseudogene 30
14256413279 56414056 + ENSG00000272969
Exon structure


ENSG00000272969
14356422692 56458379 - PDCL2
Exon structure
Hs.223712 132954 ENSG00000163440 phosducin-like 2
14456461396 56502865 - NMU
Exon structure
Hs.418367 10874 ENSG00000109255 neuromedin U
14556664802 56664897 + ENSG00000251923
Exon structure


ENSG00000251923
14656686169 56703548 + LOC644145
Exon structure
Hs.570825 644145 ENSG00000250821 Exocyst complex component 1 pseudogene (est)
14756719782 56771244 + EXOC1
Exon structure
Hs.269665 55763 ENSG00000090989 exocyst complex component 1
14856751761 56751867 + ENSG00000202358
Exon structure


ENSG00000202358
14956751760 56751867 + GC04P056755



15056754976 56759807 + GC04P056756



15156768527 56815341 - GC04M056768



15256792992 56793318 + GC04P056793



15356794959 56795947 + GC04P056794



15456796148 56796239 + ENSG00000222954
Exon structure


ENSG00000222954
15556815111 56818719 + GC04P056816



15656828899 56829220 + GC04P056835



15756828899 56829220 + GC04P056834



15856830360 56836996 - GC04M056830



15956815037 56899529 + CEP135
Exon structure
Hs.518767 9662 ENSG00000174799 centrosomal protein 135kDa
16056963556 56963670 + RNA5SP161
Exon structure

hugo1727 ENSG00000200741 RNA, 5S ribosomal pseudogene 161
16157095800 57112587 - GC04M057099



16257036361 57196890 + KIAA1211
Exon structure
Hs.596667 57482 ENSG00000109265 KIAA1211
16357112669 57173731 + GC04P057112



16457154651 57154750 - ENSG00000252489
Exon structure


ENSG00000252489