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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 4

   GeneLoc map region (1,503,597 - 5,532,559 bp) around gene/marker "LRPAP1"

   Explanation:
   LRPAP1 is located at 3,503,597-3,532,559 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
11500920 1503642 - LOC105374348
Exon structure

105374348

21514823 1515410 - GC04M001514



31508115 1528832 - GC04M001508



41518207 1518949 - GC04M001518



51545258 1553564 + GC04P001545



61550284 1550572 + ENSG00000272783
Exon structure


ENSG00000272783
71560333 1561181 + GC04P001560



81574062 1580253 - ENSG00000244459
Exon structure


ENSG00000244459
91577429 1578295 + GC04P001577



101623704 1626874 - LOC105374350
Exon structure

105374350

111627370 1629063 - LOC105374349
Exon structure

105374349

121574062 1684313 - FAM53A
Exon structure
Hs.143314 152877 ENSG00000174137 family with sequence similarity 53, member A
131683420 1683529 - ENSG00000207009
Exon structure


ENSG00000207009
141683421 1683529 - GC04M001683



151683693 1683722 - PIR55509
Exon structure




161691047 1692392 + GC04P001691



171697883 1698678 - GC04M001697



181692800 1712694 - SLBP
Exon structure
Hs.298345 7884 ENSG00000163950 stem-loop binding protein
191705139 1705170 + GC04P001705



201712821 1713622 + ENSG00000270195
Exon structure


ENSG00000270195
211715952 1721358 - TMEM129
Exon structure
Hs.518562 92305 ENSG00000168936 transmembrane protein 129, E3 ubiquitin protein ligase
221720221 1720247 - PIR44595
Exon structure




231721490 1745178 + TACC3
Exon structure
Hs.104019 10460 ENSG00000013810 transforming, acidic coiled-coil containing protein 3
241739351 1742103 + GC04P001740



251751385 1753007 - GC04M001751



261793299 1808872 + FGFR3
Exon structure
Hs.1420 2261 ENSG00000068078 fibroblast growth factor receptor 3
271802913 1803064 + GC04P001802



281809195 1813200 - GC04M001809



291823092 1823122 - GC04M001823



301811479 1856247 - LETM1
Exon structure
Hs.120165 3954 ENSG00000168924 leucine zipper-EF-hand containing transmembrane protein 1
311843166 1843193 - PIR36092
Exon structure




321850713 1870254 + GC04P001850



331869153 1869214 - RN7SL671P
Exon structure

106479467 ENSG00000240455 RNA, 7SL, cytoplasmic 671, pseudogene
341869060 1869337 - GC04M001869



351890671 1893751 + GC04P001890



361871396 1982207 + WHSC1
Exon structure
Hs.113876 7468 ENSG00000109685 Wolf-Hirschhorn syndrome candidate 1
371940877 1940904 + PIR46454
Exon structure




381943631 1943659 + PIR44856
Exon structure




391943949 1946165 + GC04P001947



401960041 1960386 - GC04M001960



411961920 1961948 - PIR46677
Exon structure




421961679 1963387 + GC04P001961



431967091 1967665 - GC04M001967



441974635 1974760 + GC04P001975



451974636 1974760 + SCARNA22
Exon structure
Hs.676951 677770 ENSG00000249784 small Cajal body-specific RNA 22
461974635 1974760 + GC04P001974



471986384 1986477 - MIR943
Exon structure

100126332 ENSG00000216105 microRNA 943
481992707 1993002 + GC04P001992



491994955 1994986 + GC04P001995



501994955 1994986 + PIR44507
Exon structure




511999501 2001839 + GC04P001999



522005721 2006812 + GC04P002007



531982714 2041914 - NELFA
Exon structure
Hs.21771 7469 ENSG00000185049 negative elongation factor complex member A
542036511 2036537 - PIR61705
Exon structure




552035608 2043970 + C4orf48
Exon structure
Hs.446474 401115 ENSG00000243449 chromosome 4 open reading frame 48
562041205 2042499 + GC04P002041



572049287 2054402 - LOC105374351
Exon structure

105374351

582053965 2058564 - GC04M002053



592059512 2069089 + NAT8L
Exon structure
Hs.318529 339983 ENSG00000185818 N-acetyltransferase 8-like (GCN5-related, putative)
602065905 2065932 + PIR47482
Exon structure




612067117 2067152 + PIR47404
Exon structure




622061355 2075072 + GC04P002062



632088115 2090704 - LOC100419959
Exon structure

100419959

642088718 2090617 - ENSG00000249006
Exon structure


ENSG00000249006
652098337 2124050 - GC04M002098



662125693 2126496 - GC04M002125



672139673 2141058 + ENSG00000250623
Exon structure


ENSG00000250623
682140911 2142626 + GC04P002140



692071918 2242164 - POLN
Exon structure
Hs.368454 353497 ENSG00000130997 polymerase (DNA directed) nu
702157269 2185106 - GC04M002157



712213127 2232465 + GC04P002213



722234251 2234499 + GC04P002234



732227464 2242164 - HAUS3
Exon structure
Hs.665869 79441 ENSG00000214367 HAUS augmin-like complex, subunit 3
742216243 2254772 - GC04M002217



752234251 2241909 + COX6B1P5
Exon structure

100289662 ENSG00000249047 cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) pseudogene 5
762246572 2246600 - PIR41429
Exon structure




772250077 2250156 - MIR4800
Exon structure

100616358 ENSG00000265080 microRNA 4800
782252522 2252552 - PIR58500
Exon structure




792252522 2252552 - GC04M002252



802254409 2255148 - LOC102723755
Exon structure

102723755

812247432 2262294 - MXD4
Exon structure
Hs.655020 10608 ENSG00000123933 MAX dimerization protein 4
822288593 2290922 + GC04P002288



832295584 2319089 + ENSG00000251148
Exon structure


ENSG00000251148
842316197 2316506 - RN7SL589P
Exon structure

106479438 ENSG00000239247 RNA, 7SL, cytoplasmic 589, pseudogene
852324467 2325086 + LOC100421664
Exon structure

100421664 ENSG00000249077
862335455 2337396 + GC04P002335



872267524 2418690 - ZFYVE28
Exon structure
Hs.292056 57732 ENSG00000159733 zinc finger, FYVE domain containing 28
882342581 2344660 - LOC105374352
Exon structure

105374352

892328615 2366194 - GC04M002328



902385704 2385730 - PIR52561
Exon structure




912393859 2393886 + PIR44270
Exon structure




922409677 2410813 - GC04M002409



932406089 2414560 + GC04P002406



942418974 2450360 + ENSG00000206113
Exon structure


ENSG00000206113
952418893 2462963 + CFAP99
Exon structure
Hs.443116 402160 ENSG00000249428 cilia and flagella associated protein 99
962457355 2463065 - GC04M002457



972463014 2466198 + LOC105374353
Exon structure

105374353 ENSG00000248399
982484729 2523580 + GC04P002484



992505081 2506279 - ENSG00000251229
Exon structure


ENSG00000251229
1002462220 2625320 + RNF4
Exon structure
Hs.66394 6047 ENSG00000063978 ring finger protein 4
1012564145 2564701 - GC04M002564



1022581989 2583888 + GC04P002581



1032607870 2608146 - ENSG00000248155
Exon structure


ENSG00000248155
1042615124 2615224 - ENSG00000206738
Exon structure


ENSG00000206738
1052596288 2732575 + FAM193A
Exon structure
Hs.652364 8603 ENSG00000125386 family with sequence similarity 193, member A
1062694863 2695570 + GC04P002694



1072696991 2699497 + GC04P002696



1082702807 2703789 + GC04P002702



1092730095 2730926 - GC04M002730



1102741648 2756376 - TNIP2
Exon structure
Hs.368551 79155 ENSG00000168884 TNFAIP3 interacting protein 2
1112755473 2756570 + GC04P002755



1122762938 2762970 + GC04P002762



1132766471 2767978 - GC04M002766



1142761384 2775232 + LOC102723763
Exon structure

102723763

1152773931 2773957 + PIR54366
Exon structure




1162773247 2775534 - GC04M002773



1172784478 2784505 - PIR37134
Exon structure




1182792353 2792470 - GC04M002792



1192792353 2792470 - GC04M002793



1202793023 2841098 + SH3BP2
Exon structure
Hs.167679 6452 ENSG00000087266 SH3-domain binding protein 2
1212843892 2844022 + GC04P002844



1222843892 2844022 + GC04P002845



1232843892 2844022 + GC04P002843



1242843727 2930076 + ADD1
Exon structure
Hs.183706 118 ENSG00000087274 adducin 1 (alpha)
1252904840 2904870 + PIR46708
Exon structure




1262904840 2904870 + GC04P002904



1272930560 2934868 - MFSD10
Exon structure
Hs.632581 10227 ENSG00000109736 major facilitator superfamily domain containing 10
1282934899 2961738 + NOP14-AS1
Exon structure
Hs.398178; Hs.731500 317648 ENSG00000249673 NOP14 antisense RNA 1
1292937933 2963506 - NOP14
Exon structure
Hs.627133 8602 ENSG00000087269 NOP14 nucleolar protein
1302981427 2981512 - ENSG00000278136
Exon structure


ENSG00000278136
1312963505 3040752 + GRK4
Exon structure
Hs.32959 2868 ENSG00000125388 G protein-coupled receptor kinase 4
1323003931 3003962 + GC04P003003



1333004003 3005620 - GC04M003004



1343044101 3044207 + RNU6-204P
Exon structure

106481241 ENSG00000199335 RNA, U6 small nuclear 204, pseudogene
1353044100 3044207 + GC04P003044



1363045427 3045866 + GC04P003047



1373058934 3059719 + GC04P003058



1383060247 3060539 - GC04M003060



1393060703 3061144 - GC04M003061



1403062753 3062781 - PIR39370
Exon structure




1413063471 3063701 + GC04P003064



1423063472 3063701 + ENSG00000278778
Exon structure


ENSG00000278778
1433064561 3064833 - GC04M003068



1443063246 3074514 - HTT-AS
Exon structure

100750326 ENSG00000251075 HTT antisense RNA (head to head)
1453069977 3070151 + ENSG00000274693
Exon structure


ENSG00000274693
1463072419 3072451 - GC04M003072



1473072419 3072451 - PIR60190
Exon structure




1483074455 3074515 + GC04P003074



1493078481 3078531 - GC04M003078



1503078484 3078542 - RNU7-33P
Exon structure

100147820
RNA, U7 small nuclear 33 pseudogene
1513105725 3106075 - GC04M003105



1523121409 3123592 + GC04P003121



1533145145 3153958 - GC04M003145



1543074510 3243960 + HTT
Exon structure
Hs.518450 3064 ENSG00000197386 huntingtin
1553241598 3271738 + MSANTD1
Exon structure
Hs.442291 345222 ENSG00000188981 Myb/SANT-like DNA-binding domain containing 1
1563284851 3288242 - GC04M003284



1573297551 3297581 + GC04P003297



1583297551 3297581 + PIR53147
Exon structure




1593312421 3313058 + LOC100286945
Exon structure

100286945 ENSG00000248840
1603323926 3324782 - RPL7AP29
Exon structure

100271043 ENSG00000248843 ribosomal protein L7a pseudogene 29
1613323977 3324762 - GC04M003323



1623292978 3439913 + RGS12
Exon structure
Hs.527061 6002 ENSG00000159788 regulator of G-protein signaling 12
1633368569 3368677 - GC04M003368



1643369113 3369141 - PIR55428
Exon structure




1653428091 3428120 + PIR36896
Exon structure




1663431206 3431232 + PIR44828
Exon structure




1673441887 3449495 + HGFAC
Exon structure
Hs.104 3083 ENSG00000109758 HGF activator
1683450104 3453280 + LOC105374354
Exon structure

105374354

1693463333 3470175 + GC04P003463



1703474938 3476390 - LOC105374355
Exon structure

105374355

1713478887 3481290 - GC04M003478



1723463306 3501476 + DOK7
Exon structure
Hs.701584; Hs.122110 285489 ENSG00000175920 docking protein 7
1733490605 3491242 + GC04P003490



1743503597 3504457 - ENSG00000261643
Exon structure


ENSG00000261643
1753509134 3509899 - GC04M003509



1763509134 3509899 - GC04M003519



1773510898 3510928 - PIR51085
Exon structure




1783510898 3510928 - GC04M003516



1793511162 3511191 - PIR35299
Exon structure




1803503597 3532559 - LRPAP1
Exon structure
Hs.40966 4043 ENSG00000163956 low density lipoprotein receptor-related protein associated protein 1
1813538044 3538418 + ENSG00000280230
Exon structure


ENSG00000280230
1823539640 3539671 + GC04P003540



1833544555 3548796 + LOC105374356
Exon structure

105374356 ENSG00000270090
1843576869 3590985 + LINC00955
Exon structure
Hs.145563 285492 ENSG00000216560 long intergenic non-protein coding RNA 955
1853604649 3606927 + GC04P003604



1863604649 3606927 + GC04P003605



1873604649 3606927 + GC04P003606



1883613841 3614339 + GC04P003613



1893633029 3633975 + ENSG00000250681
Exon structure


ENSG00000250681
1903640471 3643741 - GC04M003640



1913645103 3653896 + LOC105374357
Exon structure

105374357

1923673593 3677855 - LOC100133461
Exon structure
Hs.554274 100133461 ENSG00000250632 Uncharacterized LOC100133461 (est)
1933694675 3704172 - GC04M003694



1943760407 3760438 - PIR54762
Exon structure




1953760407 3760438 - GC04M003763



1963758748 3763390 - ENSG00000250986
Exon structure


ENSG00000250986
1973766348 3768526 + ADRA2C
Exon structure
Hs.123022 152 ENSG00000184160 adrenoceptor alpha 2C
1983863187 3888615 + GC04P003863



1993889356 3890249 - GC04M003889



2003889303 3890327 - OR7E163P
Exon structure

100131415 ENSG00000251166 olfactory receptor, family 7, subfamily E, member 163, pseudogene
2013901506 3902540 - OR7E162P
Exon structure

442101 ENSG00000234386 olfactory receptor, family 7, subfamily E, member 162 pseudogene
2023910283 3910604 + ENSG00000249522
Exon structure


ENSG00000249522
2033915187 3924274 - ENSG00000271977
Exon structure


ENSG00000271977
2043921809 3922154 - GC04M003921



2053921631 3924274 - LOC100420818
Exon structure

100420818

2063915183 3955419 - ENSG00000253917
Exon structure


ENSG00000253917
2073935446 3945048 + ALG1L7P
Exon structure

728263 ENSG00000251271 asparagine-linked glycosylation 1-like 7, pseudogene
2083941760 3955428 - FAM86EP
Exon structure
Hs.591720 348926 ENSG00000251669 family with sequence similarity 86, member E, pseudogene
2093954433 3956982 + GC04P003954



2103956372 3963889 + LOC105374358
Exon structure

105374358

2113964516 3964553 + GC04P003964



2123967033 3967660 - ENPP7P9
Exon structure

100421803 ENSG00000250476 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 9
2133976729 3978984 - GC04M003976



2143988581 4006568 + LOC105374359
Exon structure

105374359

2154005304 4005334 + GC04P004005



2164021055 4053150 - GC04M004021



2174042553 4042581 + GC04P004042



2184032391 4074289 + LOC101928217
Exon structure

101928217

2194060326 4060344 + GC04P004060



2204029056 4107936 - LOC100130459
Exon structure

100130459

2214076667 4077515 - RPS3AP16
Exon structure

727951
ribosomal protein S3a pseudogene 16
2224076711 4077491 - ENSG00000243894
Exon structure


ENSG00000243894
2234084334 4084481 + ENSG00000221301
Exon structure


ENSG00000221301
2244086638 4086814 + ENSG00000250940
Exon structure


ENSG00000250940
2254087291 4088393 + GC04P004090



2264087291 4088393 + GC04P004087



2274108291 4108317 + PIR31961
Exon structure




2284117925 4118284 - ENSG00000248669
Exon structure


ENSG00000248669
2294126659 4127569 - GC04M004127



2304126606 4127630 - OR4D12P
Exon structure

282754 ENSG00000198787 olfactory receptor, family 4, subfamily D, member 12 pseudogene
2314143458 4150421 - UNC93B4
Exon structure

643384 ENSG00000250381 unc-93 homolog B4 pseudogene (C. elegans)
2324145571 4150707 - GC04M004147



2334156522 4157443 - GC04M004156



2344156479 4157503 - OR7E99P
Exon structure

81419 ENSG00000250710 olfactory receptor, family 7, subfamily E, member 99 pseudogene
2354158697 4161253 - GC04M004162



2364163947 4165847 - GC04M004163



2374174321 4175290 - OR7E43P
Exon structure

26475 ENSG00000249844 olfactory receptor, family 7, subfamily E, member 43 pseudogene
2384189285 4189313 + PIR49722
Exon structure




2394188803 4226894 - OTOP1
Exon structure
Hs.534544 133060 ENSG00000163982 otopetrin 1
2404235542 4248242 - TMEM128
Exon structure
Hs.12845 85013 ENSG00000132406 transmembrane protein 128
2414267701 4290169 - LYAR
Exon structure
Hs.425427 55646 ENSG00000145220 Ly1 antibody reactive
2424281073 4282458 + GC04P004281



2434290197 4321786 + ZBTB49
Exon structure
Hs.419997 166793 ENSG00000168826 zinc finger and BTB domain containing 49
2444314721 4317435 - GC04M004314



2454321962 4334182 + ENSG00000248516
Exon structure


ENSG00000248516
2464333657 4333683 + PIR59167
Exon structure




2474370372 4381912 + LOC105374360
Exon structure

105374360

2484348140 4419058 + NSG1
Exon structure
Hs.518595 27065 ENSG00000168824 Neuron specific gene family member 1 (est)
2494476121 4481700 - STX18-IT1
Exon structure

104472519 ENSG00000248221 STX18 intronic transcript 1
2504415742 4542346 - STX18
Exon structure
Hs.584913 53407 ENSG00000168818 syntaxin 18
2514499369 4499396 - PIR62291
Exon structure




2524507045 4507833 + RPS7P15
Exon structure

728015 ENSG00000237170 ribosomal protein S7 pseudogene 15
2534543563 4544396 - GC04M004543



2544550905 4550933 + PIR46757
Exon structure




2554565863 4566870 + GC04P004565



2564560368 4583317 - LOC101928237
Exon structure

101928237

2574592895 4616400 + GC04P004592



2584607190 4607218 + PIR33592
Exon structure




2594542131 4710938 + STX18-AS1
Exon structure
Hs.276795 100507266 ENSG00000247708 STX18 antisense RNA 1 (head to head)
2604643857 4643888 + PIR32620
Exon structure




2614686889 4687832 - GC04M004686



2624761760 4787374 + LOC101928279
Exon structure

101928279

2634786283 4786310 + PIR47095
Exon structure




2644820405 4821452 + ENSG00000280310
Exon structure


ENSG00000280310
2654839675 4849946 + GC04P004839



2664844437 4850827 + LINC01396
Exon structure

103695434 ENSG00000273396 long intergenic non-protein coding RNA 1396
2674859665 4863936 + MSX1
Exon structure
Hs.424414 4487 ENSG00000163132 msh homeobox 1
2684888121 4895280 + GC04P004888



2694893624 4895268 - LDHAP1
Exon structure

3940 ENSG00000251587 lactate dehydrogenase A pseudogene 1
2704920770 4921064 - RN7SKP113
Exon structure

106480465 ENSG00000200761 RNA, 7SK small nuclear pseudogene 113
2714929321 4929648 + GC04P004929



2724920808 4988671 + LOC101928306
Exon structure

101928306

2734939935 4983962 + GC04P004939



2745011889 5013087 - GC04M005011



2755014586 5019472 - CYTL1
Exon structure
Hs.13872 54360 ENSG00000170891 cytokine-like 1
2765004561 5034820 + LOC105374361
Exon structure

105374361

2775121665 5159188 + GC04P005121



2785189718 5203914 - LOC105374362
Exon structure

105374362

2795051211 5500998 + STK32B
Exon structure
Hs.133062 55351 ENSG00000152953 serine/threonine kinase 32B
2805298085 5298913 + GC04P005298



2815426884 5426984 - GC04M005426



2825426885 5426984 - ENSG00000252266
Exon structure


ENSG00000252266
2835458558 5458881 - GC04M005458



2845458581 5458881 - RN7SKP275
Exon structure

106480917 ENSG00000201496 RNA, 7SK small nuclear pseudogene 275
2855485877 5488665 - GC04M005485



2865524569 5527801 + LINC01587
Exon structure
Hs.177972 10141 ENSG00000082929 long intergenic non-protein coding RNA 1587
2875525369 5533374 + GC04P005525