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  Chromosome 3

   GeneLoc map region (128,569,369 - 132,735,556 bp) around gene/marker "ATP2C1"

   Explanation:
   ATP2C1 is located at 130,569,369-130,735,556 bp

    [ GeneLoc Home Page ]


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#
Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
1128569616 128569646 + PIR52743
Exon structure




2128569774 128569804 - PIR35449
Exon structure




3128570808 128570839 + PIR50799
Exon structure




4128571009 128571040 + GC03P128946



5128571009 128571040 + PIR37790
Exon structure




6128571009 128571040 + GC03P128956



7128570463 128571851 - MARK2P6
Exon structure

100421500 ENSG00000242062 MAP/microtubule affinity-regulating kinase 2 pseudogene 6
8128571293 128571323 + PIR53048
Exon structure




9128571293 128571323 + GC03P128972



10128571339 128571368 + GC03P128961



11128571339 128571368 + PIR42499
Exon structure




12128571413 128571442 + PIR49684
Exon structure




13128571448 128571476 + PIR39548
Exon structure




14128571448 128571476 + GC03P128958



15128571589 128571620 + PIR51418
Exon structure




16128571637 128571666 + PIR52320
Exon structure




17128571817 128571847 + PIR36760
Exon structure




18128573068 128573097 + PIR57078
Exon structure




19128573597 128573627 + PIR44450
Exon structure




20128573615 128573645 + PIR52523
Exon structure




21128574377 128574408 + PIR58303
Exon structure




22128574801 128574831 + PIR36399
Exon structure




23128574952 128574988 + PIR39044
Exon structure




24128574952 128574988 + GC03P128945



25128575052 128575081 + PIR57858
Exon structure




26128575195 128575224 + PIR37466
Exon structure




27128575433 128575459 - PIR42551
Exon structure




28128576092 128576122 + PIR54831
Exon structure




29128576719 128576746 + PIR31609
Exon structure




30128576901 128576931 + PIR38180
Exon structure




31128576947 128576976 + PIR56371
Exon structure




32128577252 128577281 + PIR59282
Exon structure




33128577419 128577449 + PIR49218
Exon structure




34128577582 128577612 + PIR37124
Exon structure




35128577965 128577991 - PIR43131
Exon structure




36128578067 128578097 + GC03P128974



37128578067 128578097 + PIR53698
Exon structure




38128578212 128578242 + PIR48035
Exon structure




39128578294 128578323 + GC03P128978



40128578294 128578323 + PIR61743
Exon structure




41128578502 128578532 + PIR37590
Exon structure




42128578514 128578543 + PIR45189
Exon structure




43128578793 128578823 + PIR45018
Exon structure




44128578559 128579369 - ENSG00000261159
Exon structure


ENSG00000261159
45128579170 128579201 + GC03P128952



46128579170 128579201 + PIR36912
Exon structure




47128579206 128579232 + PIR32087
Exon structure




48128580339 128580371 - PIR33006
Exon structure




49128580474 128580504 - PIR49297
Exon structure




50128580661 128580690 + PIR44498
Exon structure




51128580740 128580769 + PIR32341
Exon structure




52128575712 128591446 + PIRC14
Exon structure

100313784
piwi-interacting RNA cluster 14
53128578559 128590947 + GC03P128979



54128580156 128590384 - LOC653712
Exon structure
Hs.653243 653712 ENSG00000231305 Intraflagellar transport 122 homolog (Chlamydomonas) pseudogene (est)
55128580169 128590384 - GC03M128673



56128588427 128588457 - PIR49680
Exon structure




57128588467 128588869 + ENSG00000250796
Exon structure


ENSG00000250796
58128590319 128590348 - GC03M128671



59128590319 128590348 - PIR59339
Exon structure




60128590611 128590641 - GC03M128672



61128590611 128590641 - PIR61007
Exon structure




62128590705 128590731 - PIR60244
Exon structure




63128591038 128591066 - PIR58827
Exon structure




64128600050 128600079 + PIR50406
Exon structure




65128598333 128634910 + ACAD9
Exon structure
Hs.567482 28976 ENSG00000177646 acyl-CoA dehydrogenase family, member 9
66128631076 128631104 + PIR32848
Exon structure




67128641654 128641688 - PIR34951
Exon structure




68128651822 128651848 + PIR62265
Exon structure




69128653872 128653898 + PIR53454
Exon structure




70128654856 128654884 + PIR40899
Exon structure




71128628709 128690173 - LOC100132731
Exon structure
Hs.734225 100132731 ENSG00000187695 Uncharacterized LOC100132731 (est)
72128664925 128664955 - PIR48384
Exon structure




73128628709 128721533 - KIAA1257
Exon structure
Hs.518247 57501 ENSG00000114656 KIAA1257
74128670615 128690334 + PIRC15
Exon structure

100313848
piwi-interacting RNA cluster 15
75128680984 128684200 - GC03M128682



76128719319 128720388 - GC03M128720



77128726543 128726569 + PIR62024
Exon structure




78128720472 128759585 + EFCC1
Exon structure
Hs.134807 79825 ENSG00000114654 EF-hand and coiled-coil domain containing 1
79128742710 128742737 - PIR31053
Exon structure




80128764606 128765843 + LOC100130760
Exon structure

100130760 ENSG00000249505
81128779610 128781253 + GP9
Exon structure
Hs.1144 2815 ENSG00000169704 glycoprotein IX (platelet)
82128785964 128785994 - PIR45850
Exon structure




83128792139 128792241 + ENSG00000252435
Exon structure


ENSG00000252435
84128792938 128793045 + ENSG00000238874
Exon structure


ENSG00000238874
85128808499 128808527 - PIR45401
Exon structure




86128806412 128841644 - RAB43
Exon structure
Hs.381132; Hs.546542 339122 ENSG00000172780 RAB43, member RAS oncogene family
87128835625 128835651 - PIR33900
Exon structure




88128806412 128880073 - ISY1-RAB43
Exon structure

100534599 ENSG00000261796 ISY1-RAB43 readthrough
89128848166 128848193 - PIR40814
Exon structure




90128848675 128848703 - PIR52955
Exon structure




91128853692 128853718 - PIR42996
Exon structure




92128853700 128853730 - PIR54178
Exon structure




93128846258 128880136 - ISY1
Exon structure
Hs.512661 57461 ENSG00000240682 ISY1 splicing factor homolog (S. cerevisiae)
94128886658 128902810 - CNBP
Exon structure
Hs.518249 7555 ENSG00000169714 CCHC-type zinc finger, nucleic acid binding protein
95128936879 128937215 - RPS27P12
Exon structure

100271117 ENSG00000241673 ribosomal protein S27 pseudogene 12
96128949392 128955149 + GC03P128951



97128966536 128966563 - PIR44075
Exon structure




98128968449 128996616 + COPG1
Exon structure
Hs.518250 22820 ENSG00000181789 coatomer protein complex, subunit gamma 1
99128997671 129025029 + HMCES
Exon structure
Hs.458320 56941 ENSG00000183624 5-hydroxymethylcytosine (hmC) binding, ES cell-specific
100129033614 129035120 - H1FX
Exon structure
Hs.75307 8971 ENSG00000184897 H1 histone family, member X
101129035113 129043412 + GC03P129037



102129034235 129045068 + H1FX-AS1
Exon structure
Hs.450096 339942 ENSG00000206417 H1FX antisense RNA 1
103129041881 129044269 - NUP210P3
Exon structure

100419070 ENSG00000248916 nucleoporin 210kDa pseudogene 3
104129053373 129054148 + MARK2P3
Exon structure

100421507 ENSG00000270492 MAP/microtubule affinity-regulating kinase 2 pseudogene 3
105129064253 129065007 + LOC100421508
Exon structure

100421508 ENSG00000270773
106129086749 129088679 - GC03M129088



107129100750 129100780 + PIR38940
Exon structure




108129106259 129106286 - PIR62447
Exon structure




109129100141 129112992 + ENSG00000244932
Exon structure


ENSG00000244932
110129101677 129118282 - GC03M129103



111129101677 129118498 - RPL32P3
Exon structure
Hs.652423; Hs.477537 132241 ENSG00000251474 ribosomal protein L32 pseudogene 3
112129116052 129116191 - GC03M129118



113129116053 129116191 - SNORA7B
Exon structure
Hs.711399 677797 ENSG00000207088 small nucleolar RNA, H/ACA box 7B
114129120164 129147494 - EFCAB12
Exon structure
Hs.652347 90288 ENSG00000172771 EF-hand calcium binding domain 12
115129149787 129158878 - MBD4
Exon structure
Hs.35947 8930 ENSG00000129071 methyl-CpG binding domain protein 4
116129158968 129239198 + IFT122
Exon structure
Hs.655284 55764 ENSG00000163913 intraflagellar transport 122 homolog (Chlamydomonas)
117129200475 129200506 + PIR50923
Exon structure




118129200475 129200506 + GC03P129202



119129200488 129200516 + PIR40537
Exon structure




120129207709 129207739 + GC03P129207



121129208290 129208319 + PIR61564
Exon structure




122129222569 129226395 - GC03M129224



123129225342 129225371 + PIR46036
Exon structure




124129238408 129238436 + GC03P129240



125129238408 129238436 + PIR41648
Exon structure




126129247482 129254187 + RHO
Exon structure
Hs.247565 6010 ENSG00000163914 rhodopsin
127129262057 129270310 + H1FOO
Exon structure
Hs.97358 132243 ENSG00000178804 H1 histone family, member O, oocyte-specific
128129296364 129296437 + GC03P129298



129129274018 129325661 - PLXND1
Exon structure
Hs.301685 23129 ENSG00000004399 plexin D1
130129310192 129310488 + RN7SL752P
Exon structure

hugo1451 ENSG00000239437 RNA, 7SL, cytoplasmic 752, pseudogene
131129350862 129351335 - ENSG00000248659
Exon structure


ENSG00000248659
132129371650 129371678 - PIR61156
Exon structure




133129366634 129407575 - GC03M129369



134129366635 129612419 - TMCC1
Exon structure
Hs.477547 23023 ENSG00000172765 transmembrane and coiled-coil domain family 1
135129526704 129527779 + GC03P129529



136129537774 129537874 + GC03P129543



137129537775 129537876 + ENSG00000202412
Exon structure


ENSG00000202412
138129538620 129538719 + RNU6-1142P
Exon structure

hugo2110 ENSG00000252786 RNA, U6 small nuclear 1142, pseudogene
139129565893 129566800 - ENSG00000203644
Exon structure


ENSG00000203644
140129612714 129627754 + GC03P129614



141129612714 129637418 + TMCC1-AS1
Exon structure
Hs.529562 100507032 ENSG00000271270 TMCC1 antisense RNA 1 (head to head)
142129672948 129688137 - ENSG00000250643
Exon structure


ENSG00000250643
143129693114 129696781 + TRH
Exon structure
Hs.732877 7200 ENSG00000170893 thyrotropin-releasing hormone
144129703935 129717779 + RPS17P9
Exon structure

100130823 ENSG00000248459 ribosomal protein S17 pseudogene 9
145129723375 129723403 + PIR61902
Exon structure




146129728792 129728818 - PIR44192
Exon structure




147129732025 129732384 - ENSG00000249869
Exon structure


ENSG00000249869
148129740399 129741423 - OR7E129P
Exon structure

391576 ENSG00000180770 olfactory receptor, family 7, subfamily E, member 129 pseudogene
149129752301 129752388 - ENSG00000263767
Exon structure


ENSG00000263767
150129753332 129754385 - OR7E21P
Exon structure

9432 ENSG00000251178 olfactory receptor, family 7, subfamily E, member 21 pseudogene
151129762156 129763668 + ARVP6125
Exon structure
Hs.626041 442092 ENSG00000254883 Uncharacterized LOC442092 (est)
152129774567 129774763 - ENSG00000251610
Exon structure


ENSG00000251610
153129808276 129813147 - ENSG00000248243
Exon structure


ENSG00000248243
154129815216 129815281 + ENSG00000266849
Exon structure


ENSG00000266849
155129800674 129832070 + ALG1L2
Exon structure
Hs.722197 644974 ENSG00000251287 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2
156129816625 129830315 - FAM86HP
Exon structure
Hs.123633 729375 ENSG00000253540 family with sequence similarity 86, member H, pseudogene
157129831393 129839422 + ENSG00000249846
Exon structure


ENSG00000249846
158129832345 129839595 - GC03M129834



159129838138 129838164 + PIR52333
Exon structure




160129886633 129886873 - ENPP7P3
Exon structure

hugo128 ENSG00000248618 ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 3
161129902366 129902466 + ENSG00000221270
Exon structure


ENSG00000221270
162129918551 129919336 + LOC100310851
Exon structure

100310851 ENSG00000250580
163129931663 129992649 + COL6A4P2
Exon structure
Hs.170475 646300 ENSG00000228252 collagen, type VI, alpha 4 pseudogene 2
164129993879 129995570 - GC03M129996



165130012180 130012605 + LOC100507083
Exon structure

100507083 ENSG00000249253
166130088070 130088187 - ENSG00000222683
Exon structure


ENSG00000222683
167130126589 130126615 + PIR62051
Exon structure




168130064359 130203688 + COL6A5
Exon structure
Hs.205403 256076 ENSG00000172752 collagen, type VI, alpha 5
169130236018 130279028 + GC03P130239



170130311369 130311462 + GC03P130313



171130279178 130396999 + COL6A6
Exon structure
Hs.591282 131873 ENSG00000206384 collagen, type VI, alpha 6
172130396512 130396981 + GC03P130399



173130397778 130465696 - PIK3R4
Exon structure
Hs.149032 30849 ENSG00000196455 phosphoinositide-3-kinase, regulatory subunit 4
174130530612 130530939 - RN7SKP212
Exon structure

hugo573 ENSG00000222783 RNA, 7SK small nuclear pseudogene 212
175130546482 130547277 + GSTO3P
Exon structure

344813 ENSG00000232829 glutathione S-transferase omega 3, pseudogene
176130633185 130633296 - GC03M130635



177130633185 130633296 - ENSG00000252894
Exon structure


ENSG00000252894
178130618258 130648820 - ENSG00000250592
Exon structure


ENSG00000250592
179130636866 130638043 - LOC100420832
Exon structure

100420832

180130637070 130637964 - ENSG00000249098
Exon structure


ENSG00000249098
181130646598 130647120 - ENSG00000251579
Exon structure


ENSG00000251579
182130646594 130647129 - LOC100420298
Exon structure

100420298

183130569369 130735556 + ATP2C1
Exon structure
Hs.584884 27032 ENSG00000017260 ATPase, Ca++ transporting, type 2C, member 1
184130732719 130746493 - ASTE1
Exon structure
Hs.100878 28990 ENSG00000034533 asteroid homolog 1 (Drosophila)
185130772161 130791183 - ENSG00000250129
Exon structure


ENSG00000250129
186130811665 130811771 - RNU6-726P
Exon structure

hugo2951 ENSG00000201550 RNA, U6 small nuclear 726, pseudogene
187130811664 130811771 - GC03M130814



188130830514 130830602 - ENSG00000212073
Exon structure


ENSG00000212073
189130907155 130907242 - ENSG00000265235
Exon structure


ENSG00000265235
190130745694 131069309 + NEK11
Exon structure
Hs.657336 79858 ENSG00000114670 NIMA-related kinase 11
191131043936 131100319 - LOC339874
Exon structure
Hs.718930; Hs.722165 339874 ENSG00000250608 Uncharacterized LOC339874; Uncharacterized LOC339874 (est)
192131080673 131083965 + GC03P131081



193131080689 131083966 + NUDT16P1
Exon structure
Hs.380350 152195 ENSG00000246082 nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1
194131087718 131090842 + GC03P131089



195131100515 131107674 + NUDT16
Exon structure
Hs.282050 131870 ENSG00000198585 nudix (nucleoside diphosphate linked moiety X)-type motif 16
196131121648 131121676 - PIR60346
Exon structure




197131173970 131177442 - ENSG00000261167
Exon structure


ENSG00000261167
198131197841 131198077 - GC03M131209



199131197842 131198077 - SNORA58
Exon structure
Hs.735762 677836 ENSG00000249020 small nucleolar RNA, H/ACA box 58
200131197940 131198048 - GC03M131208



201131197940 131198077 - PIR59241
Exon structure




202131197940 131198077 - GC03M131206



203131181045 131221860 - MRPL3
Exon structure
Hs.205163 11222 ENSG00000114686 mitochondrial ribosomal protein L3
204131236675 131239724 + ENSG00000248468
Exon structure


ENSG00000248468
205131245291 131246023 + LOC100289095
Exon structure

100289095 ENSG00000248530
206131256415 131256529 - ENSG00000251447
Exon structure


ENSG00000251447
207131252399 132004254 - CPNE4
Exon structure
Hs.199877 131034 ENSG00000196353 copine IV
208131704699 131704775 - MIR5704
Exon structure

100847040 ENSG00000265859 microRNA 5704
209131894178 131895655 + LOC729674
Exon structure

729674 ENSG00000240854
210131947943 131948015 - GC03M131953



211131947944 131948015 - TRNAC14
Exon structure

100189179
transfer RNA cysteine 14 (anticodon GCA)
212131947985 131948015 - GC03M131954



213131947985 131948015 - PIR59296
Exon structure




214131950642 131950713 - TRNAC18
Exon structure

100189250
transfer RNA cysteine 18 (anticodon GCA)
215131962304 131963130 - RPL7P16
Exon structure

729677
ribosomal protein L7 pseudogene 16
216131962372 131963109 - ENSG00000242899
Exon structure


ENSG00000242899
217131999462 131999522 + ENSG00000238701
Exon structure


ENSG00000238701
218132036211 132087146 + ACPP
Exon structure
Hs.433060 55 ENSG00000014257 acid phosphatase, prostate
219132105366 132107918 + LOC100130550
Exon structure

100130550 ENSG00000240890
220132120097 132120640 + NIP7P2
Exon structure

646392 ENSG00000213264 NIP7, nucleolar pre-rRNA processing protein pseudogene 2
221132136370 132257876 + DNAJC13
Exon structure
Hs.12707 23317 ENSG00000138246 DnaJ (Hsp40) homolog, subfamily C, member 13
222132316081 132337811 + ACKR4
Exon structure
Hs.743547 51554 ENSG00000129048 atypical chemokine receptor 4
223132276982 132379567 - ACAD11
Exon structure
Hs.441378 84129 ENSG00000240303 acyl-CoA dehydrogenase family, member 11
224132276982 132441303 - NPHP3-ACAD11
Exon structure

100532724 ENSG00000113971 NPHP3-ACAD11 readthrough (NMD candidate)
225132276986 132441303 - NPHP3
Exon structure
Hs.511991 27031 ENSG00000113971 nephronophthisis 3 (adolescent)
226132364675 132369238 + HSPA8P19
Exon structure

100420049 ENSG00000251614 heat shock 70kDa protein 8 pseudogene 19
227132363681 132403614 - GC03M132365



228132373290 132396944 + UBA5
Exon structure
Hs.170737 79876 ENSG00000081307 ubiquitin-like modifier activating enzyme 5
229132440594 132593067 + NPHP3-AS1
Exon structure
Hs.586111 348808 ENSG00000248724 NPHP3 antisense RNA 1
230132446336 132593050 + GC03P132447



231132552399 132552429 + GC03P132554



232132552399 132552429 + PIR45716
Exon structure




233132575913 132576068 + ENSG00000250355
Exon structure


ENSG00000250355
234132733848 132755896 - ENSG00000249725
Exon structure


ENSG00000249725