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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 3

   GeneLoc map region (140,168,077 - 144,297,668 bp) around gene/marker "ATR"

   Explanation:
   ATR is located at 142,168,077-142,297,668 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
1139654027 140296239 + CLSTN2
Exon structure
Hs.158529 64084 ENSG00000158258 calsyntenin 2
2140168277 140179193 - ENSG00000249290
Exon structure


ENSG00000249290
3140179842 140181667 - ENSG00000251058
Exon structure


ENSG00000251058
4140208894 140208986 - ENSG00000216184
Exon structure


ENSG00000216184
5140224453 140227631 - CLSTN2-AS1
Exon structure

101927808 ENSG00000250433 CLSTN2 antisense RNA 1
6140290548 140296239 + GC03P140292



7140338536 140338679 - ENSG00000249305
Exon structure


ENSG00000249305
8140396866 140419992 + TRIM42
Exon structure
Hs.343487 287015 ENSG00000155890 tripartite motif containing 42
9140583917 140586625 - ENSG00000261826
Exon structure


ENSG00000261826
10140598568 140600176 + GC03P140598



11140619672 140619709 - GC03M140619



12140621036 140621493 + RPL23AP41
Exon structure

646685 ENSG00000224085 ribosomal protein L23a pseudogene 41
13140660685 140675911 + GC03P140661



14140660662 140698785 + SLC25A36
Exon structure
Hs.144130 55186 ENSG00000114120 solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
15140685622 140695489 + GC03P140685



16140691586 140692097 + ENSG00000248773
Exon structure


ENSG00000248773
17140697019 140697168 + GC03P140701



18140770244 140867453 + SPSB4
Exon structure
Hs.655112 92369 ENSG00000175093 splA/ryanodine receptor domain and SOCS box containing 4
19140795802 140866302 + GC03P140795



20140833966 140843024 - ENSG00000251270
Exon structure


ENSG00000251270
21140925377 140930121 + GC03P140925



22140934229 140934258 - PIR61633
Exon structure




23140950709 140955231 + GC03P140951



24140950756 140981467 + GC03P140952



25140977260 140977621 + RPL31P21
Exon structure

100270988 ENSG00000241400 ribosomal protein L31 pseudogene 21
26140947568 141013748 + PXYLP1
Exon structure
Hs.657887 92370 ENSG00000155893 2-phosphoxylose phosphatase 1
27141003048 141003074 - PIR50413
Exon structure




28141006201 141011158 + GC03P141006



29141024910 141030534 - GC03M141030



30141026447 141030023 - LOC100289442
Exon structure

100289442 ENSG00000249540
31140986195 141085979 - ENSG00000249417
Exon structure


ENSG00000249417
32141053584 141054644 + GC03P141054



33141043055 141168634 + ZBTB38
Exon structure
Hs.518301 253461 ENSG00000177311 zinc finger and BTB domain containing 38
34141087146 141124598 + GC03P141087



35141121659 141161439 + GC03P141124



36141161923 141161952 + PIR53590
Exon structure




37141165736 141166654 + GC03P141165



38141189390 141190792 - KRT18P35
Exon structure

391584 ENSG00000215606 keratin 18 pseudogene 35
39141243975 141244963 + RASA2-IT1
Exon structure

100874298 ENSG00000250170 RASA2 intronic transcript 1 (non-protein coding)
40141205889 141334184 + RASA2
Exon structure
Hs.655941 5922 ENSG00000155903 RAS p21 protein activator 2
41141297366 141299287 + GC03P141297



42141319118 141319421 - YWHAQP6
Exon structure

101290504 ENSG00000249986 YWHAQ pseudogene 6
43141332053 141332234 + GC03P141338



44141331749 141334185 + GC03P141337



45141381934 141439915 + LOC646730
Exon structure

646730 ENSG00000242104
46141427852 141428674 - TPT1P3
Exon structure

100421439 ENSG00000241899 tumor protein, translationally-controlled 1 pseudogene 3
47141443267 141443368 + ENSG00000241526
Exon structure


ENSG00000241526
48141457046 141466402 + RNF7
Exon structure
Hs.134623 9616 ENSG00000114125 ring finger protein 7
49141464684 141465236 + GC03P141464



50141468729 141493540 + GC03P141471



51141496949 141497044 + GC03P141504



52141496949 141497044 + GC03P141503



53141499285 141499313 + PIR31846
Exon structure




54141506753 141506851 + ENSG00000265391
Exon structure


ENSG00000265391
55141496990 141537332 + GRK7
Exon structure
Hs.680654 131890 ENSG00000114124 G protein-coupled receptor kinase 7
56141570621 141580150 + GC03P141573



57141582711 141584219 - HMGN2P25
Exon structure

729687 ENSG00000228398 high mobility group nucleosomal binding domain 2 pseudogene 25
58141583849 141584121 - GC03M141586



59141607844 141607877 + GC03P141607



60141594966 141645382 + ATP1B3
Exon structure
Hs.477789 483 ENSG00000069849 ATPase, Na+/K+ transporting, beta 3 polypeptide
61141621765 141621872 - GC03M141625



62141621766 141621872 - ENSG00000200389
Exon structure


ENSG00000200389
63141622570 141644827 + GC03P141622



64141637094 141637863 - ATP1B3-AS1
Exon structure

100874077 ENSG00000244124 ATP1B3 antisense RNA 1
65141655549 141657389 - GC03M141658



66141663270 141666233 - ENSG00000269905
Exon structure


ENSG00000269905
67141670803 141670829 - PIR46950
Exon structure




68141762386 141763067 - RPL19P6
Exon structure

100270946 ENSG00000233597 ribosomal protein L19 pseudogene 6
69141663270 141868386 - TFDP2
Exon structure
Hs.379018 7029 ENSG00000114126 transcription factor Dp-2 (E2F dimerization partner 2)
70141864295 141864397 + GC03P141868



71141864296 141864397 + ENSG00000206604
Exon structure


ENSG00000206604
72141876369 141880820 - ENSG00000272565
Exon structure


ENSG00000272565
73141876369 141944449 - GK5
Exon structure
Hs.135904; Hs.745523 256356 ENSG00000175066 glycerol kinase 5 (putative)
74141905008 141944258 - GC03M141905



75142004103 142004134 + PIR51844
Exon structure




76142025449 142166904 - XRN1
Exon structure
Hs.435103 54464 ENSG00000114127 5'-3' exoribonuclease 1
77142098962 142098989 - PIR32306
Exon structure




78142126499 142126579 - ENSG00000251804
Exon structure


ENSG00000251804
79142126498 142126612 - GC03M142130



80142131390 142133182 - GC03M142131



81142139047 142139211 - ENSG00000202125
Exon structure


ENSG00000202125
82142139046 142139211 - GC03M142143



83142153855 142166870 - GC03M142153



84142160528 142160604 + ENSG00000255637
Exon structure


ENSG00000255637
85142168944 142171014 + LOC731755
Exon structure

731755 ENSG00000242479
86142171595 142176645 - GC03M142171



87142184157 142191179 - ENSG00000244327
Exon structure


ENSG00000244327
88142215239 142218944 - GC03M142215



89142168077 142297668 - ATR
Exon structure
Hs.271791 545 ENSG00000175054 ataxia telangiectasia and Rad3 related
90142251089 142251810 - SUCLG2P1
Exon structure

100421671
succinate-CoA ligase, GDP-forming, beta subunit pseudogene 1
91142274912 142277843 - GC03M142274



92142299752 142301241 + RPL6P9
Exon structure

100270847 ENSG00000242390 ribosomal protein L6 pseudogene 9
93142310519 142310633 - RNA5SP143
Exon structure

100873410 ENSG00000252745 RNA, 5S ribosomal pseudogene 143
94142310518 142310633 - GC03M142315



95142315229 142432506 + PLS1
Exon structure
Hs.203637 5357 ENSG00000120756 plastin 1
96142373626 142375587 - PLS1-AS1
Exon structure

100873943 ENSG00000239641 PLS1 antisense RNA 1
97142392439 142392746 + RN7SKP25
Exon structure

hugo722 ENSG00000199319 RNA, 7SK small nuclear pseudogene 25
98142442916 142526730 + TRPC1
Exon structure
Hs.250687 7220 ENSG00000144935 transient receptor potential cation channel, subfamily C, member 1
99142499782 142504129 + GC03P142499



100142512681 142512802 + GC03P142517



101142512681 142512802 + GC03P142518



102142520049 142520110 + RNU7-47P
Exon structure

100147834 ENSG00000251787 RNA, U7 small nuclear 47 pseudogene
103142520060 142520110 + GC03P142523



104142536961 142537244 - GC03M142544



105142540538 142540557 - GC03M142542



106142536757 142548697 - GC03M142543



107142545896 142546570 - RPL8P3
Exon structure

100270854 ENSG00000240950 ribosomal protein L8 pseudogene 3
108142534764 142608045 - PCOLCE2
Exon structure
Hs.8944 26577 ENSG00000163710 procollagen C-endopeptidase enhancer 2
109142582731 142607864 - GC03M142582



110142645517 142661378 + RP11-372E1.4
Exon structure
Hs.38715 100507389 ENSG00000243818 Uncharacterized LOC100507389 (est)
111142668006 142682178 - PAQR9
Exon structure
Hs.656111; Hs.408385 344838 ENSG00000188582 progestin and adipoQ receptor family member IX
112142679214 142679385 + ENSG00000241592
Exon structure


ENSG00000241592
113142681796 142720401 + RP11-372E1.6
Exon structure

101927832 ENSG00000241570
114142711140 142711168 + GC03P142711



115142719687 142720309 - LOC100289361
Exon structure
Hs.599649 100289361 ENSG00000268129 Uncharacterized LOC100289361 (est)
116142683339 142779567 + U2SURP
Exon structure
Hs.596572 23350 ENSG00000163714 U2 snRNP-associated SURP domain containing
117142735734 142746112 + GC03P142735



118142753369 142754914 + GC03P142753



119142755721 142757048 + GC03P142755



120142802859 142803787 + GC03P142805



121142805875 142805905 - GC03M142805



122142805911 142805943 - GC03M142806



123142830644 142831201 + ENSG00000243733
Exon structure


ENSG00000243733
124142838173 142841812 + CHST2
Exon structure
Hs.8786 9435 ENSG00000175040 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
125142842204 142850735 + ENSG00000241679
Exon structure


ENSG00000241679
126142849527 142851286 + GC03P142856



127142884490 142884579 + ENSG00000211483
Exon structure


ENSG00000211483
128142894904 142898095 + PBX2P1
Exon structure

5088 ENSG00000244171 pre-B-cell leukemia homeobox 2 pseudogene 1
129143031909 143033271 - ENSG00000240888
Exon structure


ENSG00000240888
130143061088 143065913 + SLC9A9-AS1
Exon structure
Hs.581618 100885796 ENSG00000240012 SLC9A9 antisense RNA 1
131143086271 143086444 + GC03P143089



132143100180 143101003 + SLC9A9-AS2
Exon structure

hugo3530 ENSG00000244493 SLC9A9 antisense RNA 2
133143221916 143223186 - GAPDHP47
Exon structure

100240712 ENSG00000243033 glyceraldehyde 3 phosphate dehydrogenase pseudogene 47
134143222117 143223115 - GC03M143223



135143235965 143237071 - ST13P15
Exon structure

100422603 ENSG00000243759 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 15
136142984064 143567373 - SLC9A9
Exon structure
Hs.302257 285195 ENSG00000181804 solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9
137143339370 143346534 + LOC100128739
Exon structure

100128739 ENSG00000248374
138143372169 143376642 + GC03P143375



139143566436 143567311 - GC03M143566



140143574531 143575007 - RPS17P10
Exon structure

100271071 ENSG00000235110 ribosomal protein S17 pseudogene 10
141143598528 143598545 + GC03P143601



142143690640 143767561 + C3orf58
Exon structure
Hs.288954 205428 ENSG00000181744 chromosome 3 open reading frame 58
143143791169 143791200 - GC03M143791



144143905747 143905862 - RNA5SP144
Exon structure

100873411 ENSG00000222778 RNA, 5S ribosomal pseudogene 144
145143936262 143938475 + GC03P143936



146144160698 144164686 - GC03M144165