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  Chromosome 3

   GeneLoc map region (36,738,293 - 40,835,501 bp) around gene/marker "SCN10A"

   Explanation:
   SCN10A is located at 38,738,293-38,835,501 bp

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Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
136753913 36781352 - DCLK3
Exon structure
Hs.631907 85443 ENSG00000163673 doublecortin-like kinase 3
236808291 36810378 - HSPD1P6
Exon structure

645548 ENSG00000230067 heat shock 60kDa protein 1 (chaperonin) pseudogene 6
336810216 36825658 - ENSG00000242774
Exon structure


ENSG00000242774
436921675 36922220 - ENSG00000234073
Exon structure


ENSG00000234073
536868308 36986548 - TRANK1
Exon structure
Hs.170999 9881 ENSG00000168016 tetratricopeptide repeat and ankyrin repeat containing 1
637009682 37009807 - RNU6ATAC4P
Exon structure

100151687 ENSG00000210181 RNA, U6atac small nuclear 4, pseudogene
737009681 37009807 - GC03M037011



837017787 37018331 + PRADC1P1
Exon structure

645571 ENSG00000236165 protease-associated domain containing 1 pseudogene 1
937027357 37034795 - EPM2AIP1
Exon structure
Hs.28020 9852 ENSG00000178567 EPM2A (laforin) interacting protein 1
1037057889 37058525 - RPL29P11
Exon structure

100131713 ENSG00000224858 ribosomal protein L29 pseudogene 11
1137067128 37067188 + GC03P037070



1237034823 37107380 + MLH1
Exon structure
Hs.195364 4292 ENSG00000076242 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)
1337134624 37134725 - ENSG00000206645
Exon structure


ENSG00000206645
1437134625 37134725 - GC03M037134



1537094117 37225180 - LRRFIP2
Exon structure
Hs.740522 9209 ENSG00000093167 leucine rich repeat (in FLII) interacting protein 2
1637176149 37176596 + UBE2D3P2
Exon structure

100130139 ENSG00000225558 ubiquitin-conjugating enzyme E2D 3 pseudogene 2
1737181817 37181921 + GC03P037182



1837181818 37181921 + ENSG00000199594
Exon structure


ENSG00000199594
1937185003 37185535 - UBE2FP1
Exon structure

100421436 ENSG00000224080 ubiquitin-conjugating enzyme E2F (putative) pseudogene 1
2037237695 37238160 + RPS16P4
Exon structure

100271068 ENSG00000231449 ribosomal protein S16 pseudogene 4
2137238232 37238335 + ENSG00000238929
Exon structure


ENSG00000238929
2237283303 37285686 - ENSG00000176354
Exon structure


ENSG00000176354
2337297353 37297961 + GC03P037298



2437317028 37319650 + TCEA1P2
Exon structure

399511 ENSG00000230409 transcription elongation factor A (SII), 1 pseudogene 2
2537284668 37408370 + GOLGA4
Exon structure
Hs.344151 2803 ENSG00000144674 golgin A4
2637383140 37383257 + RNA5SP129
Exon structure

100873399 ENSG00000222208 RNA, 5S ribosomal pseudogene 129
2737420194 37425133 + GC03P037421



2837427706 37432830 + GC03P037430



2937427760 37476988 + C3orf35
Exon structure
Hs.475945 339883 ENSG00000198590 chromosome 3 open reading frame 35
3037614641 37614692 - GC03M037616



3137614642 37614704 - RNU7-73P
Exon structure

100151670 ENSG00000239105 RNA, U7 small nuclear 73 pseudogene
3237493606 37865005 + ITGA9
Exon structure
Hs.113157 3680 ENSG00000144668 integrin, alpha 9
3337789562 37790426 + RPL21P135
Exon structure

100419391 ENSG00000235482 ribosomal protein L21 pseudogene 135
3437786923 37795488 - ENSG00000243525
Exon structure


ENSG00000243525
3537831412 37831936 - NDUFAF4P3
Exon structure

100422532 ENSG00000236411 NADH dehydrogenase (ubiquinone) complex I, assembly factor 4 pseudogene 3
3637795180 37903271 - ENSG00000235257
Exon structure


ENSG00000235257
3737847319 37862591 - GC03M037847



3837864198 37867773 + GC03P037865



3937859767 37903256 - GC03M037859



4037891173 37901300 - GC03M037891



4137903451 38025960 + CTDSPL
Exon structure
Hs.475963 10217 ENSG00000144677 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
4238007214 38007300 + GC03P038009



4338010811 38011047 + GC03P038011



4438010895 38010971 + MIR26A1
Exon structure

407015 ENSG00000199075 microRNA 26a-1
4538020859 38020927 + GC03P038024



4638029550 38048679 + VILL
Exon structure
Hs.103665 50853 ENSG00000136059 villin-like
4738056059 38056160 + ENSG00000200579
Exon structure


ENSG00000200579
4838048987 38071253 - PLCD1
Exon structure
Hs.80776 5333 ENSG00000187091 phospholipase C, delta 1
4938092769 38093891 + PPP2R2DP1
Exon structure

100327036 ENSG00000231668 protein phosphatase 2, regulatory subunit B, delta pseudogene 1
5038104260 38127760 + GC03P038106



5138080696 38165516 + DLEC1
Exon structure
Hs.714499 9940 ENSG00000008226 deleted in lung and esophageal cancer 1
5238129855 38137432 + GC03P038130



5338135072 38137432 + GC03P038136



5438144620 38164574 - ENSG00000239685
Exon structure


ENSG00000239685
5538156996 38157023 + PIR60395
Exon structure




5638166783 38166885 - ENSG00000201965
Exon structure


ENSG00000201965
5738166784 38166885 - GC03M038171



5838164205 38178464 - GC03M038175



5938164205 38178531 - GC03M038172



6038164235 38178534 - GC03M038177



6138164205 38178576 - GC03M038176



6238164263 38178540 - GC03M038178



6338164201 38178733 - ACAA1
Exon structure
Hs.643487 30 ENSG00000060971 acetyl-CoA acyltransferase 1
6438167551 38178527 - GC03M038181



6538167760 38178585 - GC03M038180



6638167822 38178583 - GC03M038182



6738179854 38179880 - PIR37756
Exon structure




6838179969 38184513 + MYD88
Exon structure
Hs.82116 4615 ENSG00000172936 myeloid differentiation primary response 88
6938232295 38234884 + GC03P038235



7038206580 38296979 + OXSR1
Exon structure
Hs.475970 9943 ENSG00000172939 oxidative-stress responsive 1
7138294723 38294753 + PIR62277
Exon structure




7238311774 38312258 - ENSG00000237982
Exon structure


ENSG00000237982
7338307298 38319806 + SLC22A13
Exon structure
Hs.225941 9390 ENSG00000172940 solute carrier family 22 (organic anion transporter), member 13
7438323785 38360066 + SLC22A14
Exon structure
Hs.165559 9389 ENSG00000144671 solute carrier family 22, member 14
7538345263 38345370 - GC03M038345



7638345264 38345370 - ENSG00000199514
Exon structure


ENSG00000199514
7738366728 38370561 - DLEC1P1
Exon structure

100421153 ENSG00000230123 deleted in lung and esophageal cancer 1 pseudogene 1
7838388251 38462839 + XYLB
Exon structure
Hs.659985 9942 ENSG00000093217 xylulokinase homolog (H. influenzae)
7938433171 38433197 + PIR42930
Exon structure




8038492518 38496311 - ACVR2B-AS1
Exon structure
Hs.570596 100128640 ENSG00000229589 ACVR2B antisense RNA 1
8138495342 38534633 + ACVR2B
Exon structure
Hs.174273 93 ENSG00000114739 activin A receptor, type IIB
8238546971 38547072 - ENSG00000207512
Exon structure


ENSG00000207512
8338546972 38547072 - GC03M038549



8438556939 38557321 - DDTP1
Exon structure

101060160 ENSG00000230683 D-dopachrome tautomerase pseudogene 1
8538537618 38583652 + EXOG
Exon structure
Hs.517897 9941 ENSG00000157036 endo/exonuclease (5'-3'), endonuclease G-like
8638565867 38565896 + PIR53114
Exon structure




8738568038 38568067 + PIR53009
Exon structure




8838568290 38568319 + PIR61865
Exon structure




8938568238 38568851 - RPL18AP7
Exon structure

100133038 ENSG00000232439 ribosomal protein L18a pseudogene 7
9038568530 38568560 + PIR36600
Exon structure




9138568664 38568694 + PIR31167
Exon structure




9238568702 38568735 + PIR44083
Exon structure




9338569159 38569188 + PIR49321
Exon structure




9438573796 38573824 + PIR46951
Exon structure




9538574327 38574356 + PIR53720
Exon structure




9638577171 38577199 + PIR44042
Exon structure




9738579832 38579861 + PIR55116
Exon structure




9838601643 38601827 - GC03M038602



9938589548 38691164 - SCN5A
Exon structure
Hs.517898 6331 ENSG00000183873 sodium channel, voltage-gated, type V, alpha subunit
10038651250 38663933 - GC03M038654



10138651250 38663933 - GC03M038655



10238651251 38663933 - GC03M038656



10338738293 38835501 - SCN10A
Exon structure
Hs.250443 6336 ENSG00000185313 sodium channel, voltage-gated, type X, alpha subunit
10438841787 38841885 - ENSG00000222719
Exon structure


ENSG00000222719
10538865393 38866793 + ENSG00000231243
Exon structure


ENSG00000231243
10638888727 38888779 - PIR54995
Exon structure




10738887260 38992052 - SCN11A
Exon structure
Hs.591657 11280 ENSG00000168356 sodium channel, voltage-gated, type XI, alpha subunit
10838948805 38948880 + ENSG00000215941
Exon structure


ENSG00000215941
10939011829 39011857 - PIR61629
Exon structure




11039018392 39020127 - GC03M039019



11139018459 39024793 - GC03M039020



11239067478 39067584 + ENSG00000206708
Exon structure


ENSG00000206708
11339067481 39067584 + GC03P039067



11439093489 39138155 + WDR48
Exon structure
Hs.109778 57599 ENSG00000114742 WD repeat domain 48
11539139118 39139148 - PIR55888
Exon structure




11639138091 39149854 - GORASP1
Exon structure
Hs.721946 64689 ENSG00000114745 golgi reassembly stacking protein 1, 65kDa
11739149152 39180394 + TTC21A
Exon structure
Hs.443935 199223 ENSG00000168026 tetratricopeptide repeat domain 21A
11839183342 39196053 - CSRNP1
Exon structure
Hs.370950 64651 ENSG00000144655 cysteine-serine-rich nuclear protein 1
11939220324 39220352 + PIR56273
Exon structure




12039221226 39223012 + GC03P039223



12139224701 39234087 - XIRP1
Exon structure
Hs.737550; Hs.447868 165904 ENSG00000168334 xin actin-binding repeat containing 1
12239244495 39246970 + GC03P039248



12339246725 39252892 + GC03P039247



12439244498 39256163 + DSTNP4
Exon structure

729454 ENSG00000215034 destrin (actin depolymerizing factor) pseudogene 4
12539280588 39300798 + GC03P039281



12639304985 39323226 - CX3CR1
Exon structure
Hs.78913 1524 ENSG00000168329 chemokine (C-X3-C motif) receptor 1
12739328225 39329389 + ADAD1P1
Exon structure

100422386
adenosine deaminase domain containing 1 (testis-specific) pseudogene 1
12839371214 39373882 + GC03P039384



12939371197 39375171 + CCR8
Exon structure
Hs.113222 1237 ENSG00000179934 chemokine (C-C motif) receptor 8
13039376470 39377430 + HNRNPA1P21
Exon structure

344697 ENSG00000228168 heterogeneous nuclear ribonucleoprotein A1 pseudogene 21
13139379620 39380370 - ENSG00000238267
Exon structure


ENSG00000238267
13239400036 39401413 + EEF1A1P24
Exon structure

645715 ENSG00000223668 eukaryotic translation elongation factor 1 alpha 1 pseudogene 24
13339400010 39401550 + GC03P039404



13439418963 39422626 + GC03P039419



13539424815 39438819 + SLC25A38
Exon structure
Hs.369615 54977 ENSG00000144659 solute carrier family 25, member 38
13639449879 39450030 + GC03P039451



13739449880 39450030 + SNORA6
Exon structure

574040 ENSG00000206760 small nucleolar RNA, H/ACA box 6
13839448180 39454033 + RPSA
Exon structure
Hs.449909 3921 ENSG00000168028 ribosomal protein SA
13939452408 39452438 + PIR53261
Exon structure




14039452426 39452457 + PIR46422
Exon structure




14139452544 39452698 + GC03P039462



14239452545 39452698 + SNORA62
Exon structure

6044 ENSG00000202363 small nucleolar RNA, H/ACA box 62
14339458971 39459056 + ENSG00000264724
Exon structure


ENSG00000264724
14439508689 39567859 + MOBP
Exon structure
Hs.121333 4336 ENSG00000168314 myelin-associated oligodendrocyte basic protein
14539685129 39686196 + NFU1P1
Exon structure

100132681 ENSG00000230757 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) pseudogene 1
14640011616 40011757 + ENSG00000201570
Exon structure


ENSG00000201570
14740011615 40011757 + GC03P040011



14839850405 40301812 + MYRIP
Exon structure
Hs.594535 25924 ENSG00000170011 myosin VIIA and Rab interacting protein
14940250496 40250793 + ENSG00000265327
Exon structure


ENSG00000265327
15040280098 40280232 + GC03P040280



15140280099 40280232 + ENSG00000202517
Exon structure


ENSG00000202517
15240214636 40351189 - EIF1B-AS1
Exon structure
Hs.660388 440952
EIF1B antisense RNA 1
15340342756 40351189 + GC03P040344



15440351173 40353915 + EIF1B
Exon structure
Hs.315230 10289 ENSG00000114784 eukaryotic translation initiation factor 1B
15540364206 40364770 - PGAM1P3
Exon structure

100873887 ENSG00000230274 phosphoglycerate mutase 1 pseudogene 3
15640355293 40494820 - ENTPD3-AS1
Exon structure
Hs.619663 285266 ENSG00000223797 ENTPD3 antisense RNA 1
15740428647 40470110 + ENTPD3
Exon structure
Hs.441145 956 ENSG00000168032 ectonucleoside triphosphate diphosphohydrolase 3
15840432441 40494796 - GC03M040432



15940487071 40487905 - GC03M040487



16040487843 40494776 + GC03P040488



16140487833 40494820 - GC03M040488



16240498822 40498857 + GC03P040502



16340498783 40503861 + RPL14
Exon structure
Hs.446522 9045 ENSG00000188846 ribosomal protein L14
16440506241 40506267 + PIR56082
Exon structure




16540508031 40508661 + GC03P040514



16640518604 40531728 + ZNF619
Exon structure
Hs.407159 285267 ENSG00000177873 zinc finger protein 619
16740540382 40540494 - RNU5B-2P
Exon structure

100147750 ENSG00000199906 RNA, U5B small nuclear 2, pseudogene
16840547529 40559199 + GC03P040548



16940547483 40560227 + ZNF620
Exon structure
Hs.581541 253639 ENSG00000177842 zinc finger protein 620
17040566369 40616176 + ZNF621
Exon structure
Hs.19977 285268 ENSG00000172888 zinc finger protein 621
17140627960 40628958 - RPL5P10
Exon structure

645807 ENSG00000234067 ribosomal protein L5 pseudogene 10
17240637613 40639010 - EEF1GP3
Exon structure

651628 ENSG00000226845 eukaryotic translation elongation factor 1 gamma pseudogene 3
17340644616 40646918 - ENSG00000226302
Exon structure


ENSG00000226302
17440684764 40685532 + GC03P040685



17540740557 40740829 - HMGN2P24
Exon structure

729505 ENSG00000229072 high mobility group nucleosomal binding domain 2 pseudogene 24
17640758900 40762498 - GC03M040759



17740803003 40803347 + RPS27P4
Exon structure

389112 ENSG00000234287 ribosomal protein S27 pseudogene 4
17840807698 40904117 + ENSG00000231873
Exon structure


ENSG00000231873