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  Chromosome 3

   GeneLoc map region (36,738,293 - 40,835,501 bp) around gene/marker "SCN10A"

   Explanation:
   SCN10A is located at 38,738,293-38,835,501 bp

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Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
136753913 36781352 - DCLK3
Exon structure
Hs.631907 85443 ENSG00000163673 doublecortin-like kinase 3
236808291 36825658 - HSPD1P6
Exon structure

645548 ENSG00000230067 heat shock 60kDa protein 1 (chaperonin) pseudogene 6
336921675 36922220 - ENSG00000234073
Exon structure


ENSG00000234073
436868308 36986548 - TRANK1
Exon structure
Hs.170999 9881 ENSG00000168016 tetratricopeptide repeat and ankyrin repeat containing 1
537009681 37009807 - GC03M037012



637009583 37009907 - RNU6ATAC4P
Exon structure

100151687 ENSG00000210181 RNA, U6atac small nuclear 4, pseudogene
737014608 37015163 - ENSG00000272334
Exon structure


ENSG00000272334
837017787 37018331 + PRADC1P1
Exon structure

645571 ENSG00000236165 protease-associated domain containing 1 pseudogene 1
937026534 37026975 - ENSG00000271835
Exon structure


ENSG00000271835
1037027357 37028273 - ENSG00000272127
Exon structure


ENSG00000272127
1137027357 37034795 - EPM2AIP1
Exon structure
Hs.28020 9852 ENSG00000178567 EPM2A (laforin) interacting protein 1
1237057889 37058525 - RPL29P11
Exon structure

100131713 ENSG00000224858 ribosomal protein L29 pseudogene 11
1337067128 37067188 + GC03P037071



1437034823 37107380 + MLH1
Exon structure
Hs.195364 4292 ENSG00000076242 mutL homolog 1
1537134625 37134725 - GC03M037135



1637134624 37134725 - ENSG00000206645
Exon structure


ENSG00000206645
1737094117 37225180 - LRRFIP2
Exon structure
Hs.740522 9209 ENSG00000093167 leucine rich repeat (in FLII) interacting protein 2
1837175842 37176655 + UBE2D3P2
Exon structure

100130139 ENSG00000225558 ubiquitin-conjugating enzyme E2D 3 pseudogene 2
1937181817 37181921 + GC03P037184



2037181818 37181921 + RNU6-1301P
Exon structure

hugo2287 ENSG00000199594 RNA, U6 small nuclear 1301, pseudogene
2137185003 37185535 - UBE2FP1
Exon structure

100421436 ENSG00000224080 ubiquitin-conjugating enzyme E2F (putative) pseudogene 1
2237220579 37220861 + ENSG00000272258
Exon structure


ENSG00000272258
2337223598 37224225 + ENSG00000271993
Exon structure


ENSG00000271993
2437237695 37238160 + RPS16P4
Exon structure

100271068 ENSG00000231449 ribosomal protein S16 pseudogene 4
2537238232 37238335 + ENSG00000238929
Exon structure


ENSG00000238929
2637258270 37259479 + ENSG00000271653
Exon structure


ENSG00000271653
2737283280 37285668 - ENSG00000270194
Exon structure


ENSG00000270194
2837283303 37285686 - ENSG00000176354
Exon structure


ENSG00000176354
2937297353 37297961 + GC03P037299



3037317028 37319650 + TCEA1P2
Exon structure

399511 ENSG00000230409 transcription elongation factor A (SII), 1 pseudogene 2
3137284668 37408370 + GOLGA4
Exon structure
Hs.344151 2803 ENSG00000144674 golgin A4
3237383140 37383257 + RNA5SP129
Exon structure

100873399 ENSG00000222208 RNA, 5S ribosomal pseudogene 129
3337420194 37425133 + GC03P037422



3437427706 37432830 + GC03P037431



3537427760 37476988 + C3orf35
Exon structure
Hs.475945 339883 ENSG00000198590 chromosome 3 open reading frame 35
3637614641 37614692 - GC03M037617



3737614642 37614704 - RNU7-73P
Exon structure

100151670 ENSG00000239105 RNA, U7 small nuclear 73 pseudogene
3837493606 37865005 + ITGA9
Exon structure
Hs.113157 3680 ENSG00000144668 integrin, alpha 9
3937789562 37790426 + RPL21P135
Exon structure

100419391 ENSG00000235482 ribosomal protein L21 pseudogene 135
4037786922 37795488 - GC03M037787



4137831412 37831936 - NDUFAF4P3
Exon structure

100422532 ENSG00000236411 NADH dehydrogenase (ubiquinone) complex I, assembly factor 4 pseudogene 3
4237786923 37903271 - ENSG00000235257
Exon structure


ENSG00000235257
4337864198 37867773 + GC03P037866



4437903451 38025960 + CTDSPL
Exon structure
Hs.475963 10217 ENSG00000144677 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
4538007214 38007300 + GC03P038015



4638010811 38011047 + GC03P038014



4738010895 38010971 + MIR26A1
Exon structure

407015 ENSG00000199075 microRNA 26a-1
4838020859 38020927 + GC03P038025



4938029550 38048679 + VILL
Exon structure
Hs.103665 50853 ENSG00000136059 villin-like
5038056058 38056158 + GC03P038057



5138056059 38056160 + ENSG00000200579
Exon structure


ENSG00000200579
5238048987 38071253 - PLCD1
Exon structure
Hs.80776 5333 ENSG00000187091 phospholipase C, delta 1
5338092769 38093891 + PPP2R2DP1
Exon structure

100327036 ENSG00000231668 protein phosphatase 2, regulatory subunit B, delta pseudogene 1
5438104260 38127760 + GC03P038107



5538080696 38165516 + DLEC1
Exon structure
Hs.714499 9940 ENSG00000008226 deleted in lung and esophageal cancer 1
5638129855 38137432 + GC03P038131



5738135072 38137432 + GC03P038137



5838156996 38157023 + PIR60395
Exon structure




5938144620 38178733 - ACAA1
Exon structure
Hs.643487 30 ENSG00000060971 acetyl-CoA acyltransferase 1
6038166783 38166885 - ENSG00000201965
Exon structure


ENSG00000201965
6138166784 38166885 - GC03M038183



6238164205 38178464 - GC03M038185



6338164205 38178531 - GC03M038184



6438164235 38178534 - GC03M038187



6538164205 38178576 - GC03M038186



6638164263 38178540 - GC03M038188



6738164200 38178733 - GC03M038192



6838167551 38178527 - GC03M038190



6938167760 38178585 - GC03M038189



7038167822 38178583 - GC03M038191



7138179854 38179880 - PIR37756
Exon structure




7238179969 38184513 + MYD88
Exon structure
Hs.82116 4615 ENSG00000172936 myeloid differentiation primary response 88
7338232295 38234884 + GC03P038236



7438232295 38234884 + GC03P038237



7538206580 38296979 + OXSR1
Exon structure
Hs.475970 9943 ENSG00000172939 oxidative stress responsive 1
7638294723 38294753 + PIR62277
Exon structure




7738311774 38312258 - ENSG00000237982
Exon structure


ENSG00000237982
7838307298 38319806 + SLC22A13
Exon structure
Hs.225941 9390 ENSG00000172940 solute carrier family 22 (organic anion/urate transporter), member 13
7938323785 38360066 + SLC22A14
Exon structure
Hs.165559 9389 ENSG00000144671 solute carrier family 22, member 14
8038345264 38345370 - RNU6-235P
Exon structure

hugo2437 ENSG00000199514 RNA, U6 small nuclear 235, pseudogene
8138345263 38345370 - GC03M038347



8238366728 38370561 - DLEC1P1
Exon structure

100421153 ENSG00000230123 deleted in lung and esophageal cancer 1 pseudogene 1
8338388251 38462839 + XYLB
Exon structure
Hs.659985 9942 ENSG00000093217 xylulokinase homolog (H. influenzae)
8438433171 38433197 + PIR42930
Exon structure




8538492518 38496311 - ACVR2B-AS1
Exon structure
Hs.570596 100128640 ENSG00000229589 ACVR2B antisense RNA 1
8638495342 38534633 + ACVR2B
Exon structure
Hs.174273 93 ENSG00000114739 activin A receptor, type IIB
8738532215 38534633 + ENSG00000270674
Exon structure


ENSG00000270674
8838546972 38547072 - GC03M038551



8938546971 38547072 - ENSG00000207512
Exon structure


ENSG00000207512
9038556939 38557321 - DDTP1
Exon structure

101060160 ENSG00000230683 D-dopachrome tautomerase pseudogene 1
9138537618 38583652 + EXOG
Exon structure
Hs.517897 9941 ENSG00000157036 endo/exonuclease (5'-3'), endonuclease G-like
9238565867 38565896 + PIR53114
Exon structure




9338568038 38568067 + PIR53009
Exon structure




9438568290 38568319 + PIR61865
Exon structure




9538568530 38568560 + GC03P038596



9638568238 38568851 - RPL18AP7
Exon structure

100133038 ENSG00000232439 ribosomal protein L18a pseudogene 7
9738568530 38568560 + PIR36600
Exon structure




9838568664 38568694 + PIR31167
Exon structure




9938568702 38568735 + PIR44083
Exon structure




10038569159 38569188 + PIR49321
Exon structure




10138573796 38573824 + PIR46951
Exon structure




10238574327 38574356 + PIR53720
Exon structure




10338577171 38577199 + PIR44042
Exon structure




10438579832 38579861 + PIR55116
Exon structure




10538601643 38601827 - GC03M038603



10638589548 38691164 - SCN5A
Exon structure
Hs.517898 6331 ENSG00000183873 sodium channel, voltage-gated, type V, alpha subunit
10738651251 38663933 - GC03M038659



10838651250 38663933 - GC03M038657



10938651250 38663933 - GC03M038658



11038738293 38835501 - SCN10A
Exon structure
Hs.250443 6336 ENSG00000185313 sodium channel, voltage-gated, type X, alpha subunit
11138841787 38841885 - ENSG00000222719
Exon structure


ENSG00000222719
11238865393 38866793 + ENSG00000231243
Exon structure


ENSG00000231243
11338888727 38888779 - PIR54995
Exon structure




11438887260 38992052 - SCN11A
Exon structure
Hs.591657 11280 ENSG00000168356 sodium channel, voltage-gated, type XI, alpha subunit
11538948805 38948880 + ENSG00000215941
Exon structure


ENSG00000215941
11639011829 39011857 - PIR61629
Exon structure




11739067478 39067584 + RNU6-1227P
Exon structure

hugo2204 ENSG00000206708 RNA, U6 small nuclear 1227, pseudogene
11839067481 39067584 + GC03P039071



11939093489 39138155 + WDR48
Exon structure
Hs.109778 57599 ENSG00000114742 WD repeat domain 48
12039139118 39139148 - PIR55888
Exon structure




12139138091 39149854 - GORASP1
Exon structure
Hs.721946 64689 ENSG00000114745 golgi reassembly stacking protein 1, 65kDa
12239149152 39180394 + TTC21A
Exon structure
Hs.443935 199223 ENSG00000168026 tetratricopeptide repeat domain 21A
12339183342 39196053 - CSRNP1
Exon structure
Hs.370950 64651 ENSG00000144655 cysteine-serine-rich nuclear protein 1
12439220324 39220352 + PIR56273
Exon structure




12539221226 39223012 + GC03P039224



12639224701 39234087 - XIRP1
Exon structure
Hs.737550; Hs.447868 165904 ENSG00000168334 xin actin-binding repeat containing 1
12739244495 39252892 + GC03P039249



12839244498 39256163 + DSTNP4
Exon structure

729454 ENSG00000215034 destrin (actin depolymerizing factor) pseudogene 4
12939304985 39323226 - CX3CR1
Exon structure
Hs.78913 1524 ENSG00000168329 chemokine (C-X3-C motif) receptor 1
13039327476 39329411 + ADAD1P1
Exon structure

100422386 ENSG00000270367 adenosine deaminase domain containing 1 (testis-specific) pseudogene 1
13139371214 39373882 + GC03P039388



13239371214 39373882 + GC03P039386



13339371197 39375171 + CCR8
Exon structure
Hs.113222 1237 ENSG00000179934 chemokine (C-C motif) receptor 8
13439376470 39377430 + HNRNPA1P21
Exon structure

344697 ENSG00000228168 heterogeneous nuclear ribonucleoprotein A1 pseudogene 21
13539379620 39380370 - ENSG00000238267
Exon structure


ENSG00000238267
13639400036 39401413 + EEF1A1P24
Exon structure

645715 ENSG00000223668 eukaryotic translation elongation factor 1 alpha 1 pseudogene 24
13739400010 39401550 + GC03P039405



13839418963 39422626 + GC03P039420



13939424815 39438842 + SLC25A38
Exon structure
Hs.369615 54977 ENSG00000144659 solute carrier family 25, member 38
14039449880 39450030 + SNORA6
Exon structure
Hs.745521 574040 ENSG00000206760 small nucleolar RNA, H/ACA box 6
14139449879 39450030 + GC03P039470



14239449881 39450030 + GC03P039472



14339448180 39454033 + RPSA
Exon structure
Hs.449909 3921 ENSG00000168028 ribosomal protein SA
14439452408 39452438 + GC03P039471



14539452408 39452438 + PIR53261
Exon structure




14639452426 39452457 + GC03P039473



14739452426 39452457 + PIR46422
Exon structure




14839452544 39452698 + GC03P039468



14939452545 39452698 + SNORA62
Exon structure

6044 ENSG00000202363 small nucleolar RNA, H/ACA box 62
15039452610 39452697 + GC03P039474



15139458971 39459056 + ENSG00000264724
Exon structure


ENSG00000264724
15239508689 39570970 + MOBP
Exon structure
Hs.121333 4336 ENSG00000168314 myelin-associated oligodendrocyte basic protein
15339685129 39686196 + NFU1P1
Exon structure

100132681 ENSG00000230757 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) pseudogene 1
15440011615 40011757 + GC03P040013



15540011616 40011757 + RNU4-56P
Exon structure

hugo1901 ENSG00000201570 RNA, U4 small nuclear 56, pseudogene
15639850405 40301812 + MYRIP
Exon structure
Hs.594535 25924 ENSG00000170011 myosin VIIA and Rab interacting protein
15740250496 40250793 + RN7SL411P
Exon structure

hugo1079 ENSG00000265327 RNA, 7SL, cytoplasmic 411, pseudogene
15840280098 40280232 + GC03P040281



15940280099 40280232 + ENSG00000202517
Exon structure


ENSG00000202517
16040214635 40351189 - GC03M040217



16140214636 40351189 - EIF1B-AS1
Exon structure
Hs.660388 440952
EIF1B antisense RNA 1
16240342757 40351182 - GC03M040345



16340342757 40351189 - GC03M040344



16440342756 40351189 + GC03P040345



16540351173 40353915 + EIF1B
Exon structure
Hs.315230 10289 ENSG00000114784 eukaryotic translation initiation factor 1B
16640364206 40364770 - PGAM1P3
Exon structure

100873887 ENSG00000230274 phosphoglycerate mutase 1 pseudogene 3
16740355292 40494820 - GC03M040358



16840355293 40494820 - ENTPD3-AS1
Exon structure
Hs.619663 285266 ENSG00000223797 ENTPD3 antisense RNA 1
16940428647 40470110 + ENTPD3
Exon structure
Hs.441145 956 ENSG00000168032 ectonucleoside triphosphate diphosphohydrolase 3
17040487843 40494776 + GC03P040489



17140498822 40498857 + GC03P040505



17240498822 40498857 + GC03P040504



17340498783 40503861 + RPL14
Exon structure
Hs.446522 9045 ENSG00000188846 ribosomal protein L14
17440506241 40506267 + PIR56082
Exon structure




17540508031 40508648 + GC03P040516



17640508031 40508661 + GC03P040515



17740507957 40510078 + ENSG00000272452
Exon structure


ENSG00000272452
17840518604 40531728 + ZNF619
Exon structure
Hs.407159 285267 ENSG00000177873 zinc finger protein 619
17940540382 40540494 - RNU5B-2P
Exon structure

100147750 ENSG00000199906 RNA, U5B small nuclear 2, pseudogene
18040540382 40540494 - GC03M040541



18140547529 40559199 + GC03P040549



18240547483 40560227 + ZNF620
Exon structure
Hs.581541 253639 ENSG00000177842 zinc finger protein 620
18340566369 40616176 + ZNF621
Exon structure
Hs.19977 285268 ENSG00000172888 zinc finger protein 621
18440627960 40628958 - RPL5P10
Exon structure

645807 ENSG00000234067 ribosomal protein L5 pseudogene 10
18540637613 40639010 - EEF1GP3
Exon structure

651628 ENSG00000226845 eukaryotic translation elongation factor 1 gamma pseudogene 3
18640644616 40646918 - ENSG00000226302
Exon structure


ENSG00000226302
18740684764 40685532 + GC03P040686



18840739740 40740926 - HMGN2P24
Exon structure

729505 ENSG00000229072 high mobility group nucleosomal binding domain 2 pseudogene 24
18940758900 40762498 - GC03M040760



19040803003 40803347 + RPS27P4
Exon structure

389112 ENSG00000234287 ribosomal protein S27 pseudogene 4
19140807698 40904117 + ENSG00000231873
Exon structure


ENSG00000231873