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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 3

   GeneLoc map region (13,491,640 - 17,563,258 bp) around gene/marker "COLQ"

   Explanation:
   COLQ is located at 15,491,640-15,563,258 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
113501794 13501898 - ENSG00000238138
Exon structure


ENSG00000238138
213501924 13502389 - ENSG00000223398
Exon structure


ENSG00000223398
313501791 13514100 - LOC100128772
Exon structure

100128772

413518482 13521553 - HDAC11-AS1
Exon structure

100874101 ENSG00000244502 HDAC11 antisense RNA 1
513521224 13547924 + HDAC11
Exon structure
Hs.744132 79885 ENSG00000163517 histone deacetylase 11
613564918 13564946 - PIR59377
Exon structure




713615956 13616171 + GC03P013618



813573824 13679922 + FBLN2
Exon structure
Hs.198862 2199 ENSG00000163520 fibulin 2
913652924 13653534 - GC03M013655



1013689246 13695947 - LOC100293612
Exon structure
Hs.694643 100293612
Uncharacterized LOC100293612 (est)
1113691765 13695339 - GC03M013694



1213692196 13788132 + LINC00620
Exon structure
Hs.319969 285375 ENSG00000224514 long intergenic non-protein coding RNA 620
1313759417 13759507 - ENSG00000265457
Exon structure


ENSG00000265457
1413779558 13779629 - ENSG00000238827
Exon structure


ENSG00000238827
1513858242 13859396 - GC03M013861



1613857755 13921618 - WNT7A
Exon structure
Hs.72290 7476 ENSG00000154764 wingless-type MMTV integration site family, member 7A
1713905165 13918717 - GC03M013905



1813936522 13968460 + GC03P013936



1913963033 13963059 + PIR44204
Exon structure




2013968310 13969275 + VN1R20P
Exon structure

100312775 ENSG00000233121 vomeronasal 1 receptor 20 pseudogene
2113976698 13976729 + PIR41787
Exon structure




2213976698 13976729 + GC03P013991



2313974553 13978977 + FGD5P1
Exon structure
Hs.637770 100132526 ENSG00000250439 FYVE, RhoGEF and PH domain containing 5 pseudogene 1
2413977295 13977321 + PIR52690
Exon structure




2514007439 14007467 + PIR57574
Exon structure




2613978756 14124311 + TPRXL
Exon structure
Hs.529180; Hs.638296 348825 ENSG00000180438 tetra-peptide repeat homeobox-like
2714070791 14070833 + GC03P014070



2814130553 14131371 - VN1R21P
Exon structure

100128368 ENSG00000224752 vomeronasal 1 receptor 21 pseudogene
2914133418 14133448 - GC03M014133



3014153577 14166371 - CHCHD4
Exon structure
Hs.517815 131474 ENSG00000163528 coiled-coil-helix-coiled-coil-helix domain containing 4
3114166440 14185180 + TMEM43
Exon structure
Hs.517817 79188 ENSG00000170876 transmembrane protein 43
3214176717 14189548 + ENSG00000268279
Exon structure


ENSG00000268279
3314178644 14189784 + GC03P014180



3414186223 14189784 + ENSG00000228242
Exon structure


ENSG00000228242
3514186647 14220283 - XPC
Exon structure
Hs.475538 7508 ENSG00000154767 xeroderma pigmentosum, complementation group C
3614219858 14242619 + LSM3
Exon structure
Hs.111632 27258 ENSG00000170860 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
3714240060 14242620 - GC03M014241



3814240060 14242620 + GC03P014243



3914258906 14260259 + GC03P014258



4014266506 14272302 + GC03P014268



4114313873 14345345 - ENSG00000255021
Exon structure


ENSG00000255021
4214335508 14335540 - GC03M014335



4314389951 14394068 - RP11-536I6.1
Exon structure

101927565 ENSG00000251576
4414431283 14432524 - GC03M014434



4514436148 14436257 + RNA5SP124
Exon structure

100873394 ENSG00000199609 RNA, 5S ribosomal pseudogene 124
4614444076 14452831 + GC03P014445



4714460378 14461632 + GC03P014463



4814473896 14473959 + GC03P014476



4914444076 14530857 + SLC6A6
Exon structure
Hs.529488 6533 ENSG00000131389 solute carrier family 6 (neurotransmitter transporter), member 6
5014516752 14516786 + GC03P014516



5114530619 14583588 - GRIP2
Exon structure
Hs.517819 80852 ENSG00000144596 glutamate receptor interacting protein 2
5214555173 14559375 - GC03M014555



5314572489 14572595 - ENSG00000207163
Exon structure


ENSG00000207163
5414572488 14572595 - GC03M014576



5514605637 14605727 + GC03P014608



5614614359 14616299 - RHBDF1P1
Exon structure

131973 ENSG00000234123 rhomboid 5 homolog 1 (Drosophila) pseudogene 1
5714638046 14638076 - GC03M014640



5814638046 14638076 - PIR36606
Exon structure




5914643706 14650402 + GC03P014643



6014689414 14689441 - PIR36019
Exon structure




6114689701 14690939 - ENSG00000235629
Exon structure


ENSG00000235629
6214693270 14697168 + GC03P014698



6314693253 14714166 + CCDC174
Exon structure
Hs.517820 51244 ENSG00000154781 coiled-coil domain containing 174
6414721566 14721592 + PIR51472
Exon structure




6514716606 14814543 + C3orf20
Exon structure
Hs.661452 84077 ENSG00000131379 chromosome 3 open reading frame 20
6614781304 14781331 + PIR53505
Exon structure




6714806459 14808947 - ENSG00000230172
Exon structure


ENSG00000230172
6814819616 14819645 + PIR61652
Exon structure




6914840838 14852921 - RP11-95M5.1
Exon structure
Hs.434128 152274 ENSG00000260902 Uncharacterized LOC152274 (est)
7014861945 14861972 + PIR49239
Exon structure




7114860469 14976072 + FGD5
Exon structure
Hs.412406 152273 ENSG00000154783 FYVE, RhoGEF and PH domain containing 5
7214967413 14967439 + PIR33304
Exon structure




7314972270 14974945 + GC03P014972



7414961854 14989931 - FGD5-AS1
Exon structure
Hs.517821 100505641 ENSG00000225733 FGD5 antisense RNA 1
7514986511 14986537 - PIR49010
Exon structure




7614986769 14986799 - GC03M014996



7714986769 14986800 - PIR56984
Exon structure




7814987449 14987476 - PIR40113
Exon structure




7915001093 15001126 + PIR42900
Exon structure




8015001096 15001126 + GC03P015003



8114989091 15095107 + NR2C2
Exon structure
Hs.555973 7182 ENSG00000177463 nuclear receptor subfamily 2, group C, member 2
8215065654 15065681 + PIR57178
Exon structure




8315076092 15076122 + PIR47173
Exon structure




8415076092 15076122 + GC03P015080



8515075831 15079554 + GC03P015075



8615077907 15077936 + PIR44287
Exon structure




8715079741 15079767 + PIR44754
Exon structure




8815079873 15079900 - PIR51717
Exon structure




8915084496 15084524 - PIR51736
Exon structure




9015085093 15085126 + PIR60786
Exon structure




9115085096 15085126 + GC03P015195



9215085133 15085159 + PIR52478
Exon structure




9315083951 15086591 - GC03M015139



9415085366 15085394 + PIR41585
Exon structure




9515085418 15085454 + PIR48726
Exon structure




9615085423 15085454 + GC03P015197



9715085945 15085975 + GC03P015196



9815085945 15085975 + PIR61011
Exon structure




9915086327 15086357 + PIR32293
Exon structure




10015086327 15086357 + GC03P015193



10115086647 15086673 + PIR62284
Exon structure




10215086672 15086700 + PIR32782
Exon structure




10315086691 15086720 + PIR46174
Exon structure




10415086711 15086741 + GC03P015194



10515086711 15086749 + PIR57972
Exon structure




10615086865 15086894 + PIR57531
Exon structure




10715087135 15087165 + GC03P015199



10815087135 15087165 + PIR44895
Exon structure




10915087631 15087659 + PIR56001
Exon structure




11015087830 15087859 - PIR35570
Exon structure




11115088524 15088550 + PIR46515
Exon structure




11215088755 15088784 + GC03P015201



11315088755 15088784 + PIR36073
Exon structure




11415087058 15090778 + GC03P015200



11515089239 15089269 + PIR59836
Exon structure




11615089239 15089269 + GC03P015198



11715089764 15089795 - GC03M015141



11815089764 15089795 - PIR34257
Exon structure




11915090072 15090100 + PIR47793
Exon structure




12015090477 15090509 + GC03P015175



12115090461 15090575 + GC03P015187



12215090461 15090575 + PIR45529
Exon structure




12315090829 15090858 - PIR60120
Exon structure




12415090829 15090858 - GC03M015143



12515091877 15091906 - PIR37417
Exon structure




12615091890 15091917 - PIR43410
Exon structure




12715093428 15093457 - PIR32672
Exon structure




12815093674 15093700 - PIR51108
Exon structure




12915093873 15093905 - PIR50374
Exon structure




13015093873 15093905 - GC03M015140



13115083967 15106842 - MRPS25
Exon structure
Hs.715617 64432 ENSG00000131368 mitochondrial ribosomal protein S25
13215087166 15106885 - PIRC12
Exon structure

100313808
piwi-interacting RNA cluster 12
13315102776 15102808 - GC03M015138



13415103150 15103178 + GC03P015190



13515103189 15103220 + GC03P015188



13615103226 15103258 + GC03P015191



13715104293 15104336 + GC03P015192



13815112060 15112087 - PIR31507
Exon structure




13915119612 15119638 - PIR45543
Exon structure




14015119617 15123067 - GC03M015135



14115111614 15136052 + GC03P015181



14215111580 15140670 - ZFYVE20
Exon structure
Hs.475565 64145 ENSG00000131381 zinc finger, FYVE domain containing 20
14314915263 15357518 - GC03M014916



14415140788 15142279 + GC03P015185



14515149461 15150399 - GC03M015151



14615167641 15167669 - PIR45003
Exon structure




14715173343 15173715 - RPS24P10
Exon structure

100271097 ENSG00000228874 ribosomal protein S24 pseudogene 10
14815175890 15176037 - ENSG00000221424
Exon structure


ENSG00000221424
14915182863 15183711 + RPS3AP53
Exon structure

100287512 ENSG00000227578 ribosomal protein S3a pseudogene 53
15015187327 15187357 + GC03P015189



15115203751 15203781 - GC03M015203



15215203793 15203836 - GC03M015204



15315205093 15205128 - GC03M015205



15415205129 15205161 - GC03M015207



15515205579 15205611 + GC03P015205



15615193340 15247466 - COL6A4P1
Exon structure
Hs.722756 344875 ENSG00000230524 collagen, type VI, alpha 4 pseudogene 1
15715247659 15294425 + CAPN7
Exon structure
Hs.595234 23473 ENSG00000131375 calpain 7
15815278507 15278600 - ENSG00000252085
Exon structure


ENSG00000252085
15915287394 15293809 + GC03P015287



16015299659 15299687 + PIR49400
Exon structure




16115295691 15306000 + SH3BP5-AS1
Exon structure
Hs.745026 100505696 ENSG00000224660 SH3BP5 antisense RNA 1
16215296357 15382901 - SH3BP5
Exon structure
Hs.257761 9467 ENSG00000131370 SH3-domain binding protein 5 (BTK-associated)
16315354690 15357518 - GC03M015354



16415358127 15358229 + ENSG00000238891
Exon structure


ENSG00000238891
16515345609 15373570 - GC03M015346



16615381255 15381362 + GC03P015385



16715381256 15381362 + ENSG00000201162
Exon structure


ENSG00000201162
16815400625 15403773 + GC03P015400



16915415760 15417267 - HMGN2P7
Exon structure

644498 ENSG00000226427 high mobility group nucleosomal binding domain 2 pseudogene 7
17015416880 15417152 - GC03M015417



17115425150 15440998 - GC03M015425



17215422782 15482073 - METTL6
Exon structure
Hs.149487 131965 ENSG00000206562 methyltransferase like 6
17315452843 15457367 - GC03M015452



17415468543 15469365 + GC03P015476



17515468543 15469365 + GC03P015475



17615474616 15474723 - GC03M015485



17715474617 15474723 - ENSG00000206926
Exon structure


ENSG00000206926
17815468862 15484120 + EAF1
Exon structure
Hs.716733 85403 ENSG00000144597 ELL associated factor 1
17915481218 15481245 + PIR42374
Exon structure




18015477678 15493109 - EAF1-AS1
Exon structure

100873956 ENSG00000249786 EAF1 antisense RNA 1
18115491673 15492386 - GC03M015493



18215492599 15492627 - PIR34077
Exon structure




18315510053 15510087 + GC03P015510



18415516735 15519093 - GC03M015516



18515520097 15520881 - GC03M015520



18615491640 15563258 - COLQ
Exon structure
Hs.146735 8292 ENSG00000206561 collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
18715537746 15537815 - MIR4270
Exon structure

100422868 ENSG00000263573 microRNA 4270
18815542974 15545645 + GC03P015542



18915548132 15548412 - RN7SL110P
Exon structure

hugo858 ENSG00000241064 RNA, 7SL, cytoplasmic 110, pseudogene
19015549497 15549532 + PIR43678
Exon structure




19115598107 15598136 - PIR61561
Exon structure




19215602211 15643338 - HACL1
Exon structure
Hs.63290 26061 ENSG00000131373 2-hydroxyacyl-CoA lyase 1
19315642877 15677121 + GC03P015642



19415642848 15687329 + BTD
Exon structure
Hs.517830 686 ENSG00000169814 biotinidase
19515710988 15711016 - PIR61991
Exon structure




19615718103 15719113 - GC03M015718



19715720808 15727960 - GC03M015720



19815731347 15737738 - GC03M015731



19915738805 15738878 - MIR3134
Exon structure

100422990 ENSG00000264354 microRNA 3134
20015773759 15774977 + ENSG00000270409
Exon structure


ENSG00000270409
20115780022 15780315 + RN7SL4P
Exon structure

6030 ENSG00000263740 RNA, 7SL, cytoplasmic 4, pseudogene
20215765904 15798055 - GC03M015765



20315783671 15783699 + GC03P015789



20415783747 15783779 + GC03P015790



20515783780 15783815 + GC03P015788



20615784600 15784643 + GC03P015791



20715784655 15784685 + GC03P015787



20815781727 15803693 + GC03P015792



20915708743 15901278 - ANKRD28
Exon structure
Hs.335239 23243 ENSG00000206560 ankyrin repeat domain 28
21015822944 15839486 - GC03M015822



21115907724 15907924 + GC03P015911



21215915277 15915356 + GC03P015918



21315915278 15915356 + MIR563
Exon structure

693148 ENSG00000207815 microRNA 563
21415920384 15920415 - PIR53539
Exon structure




21515920534 15920563 + PIR43829
Exon structure




21615920534 15920563 + GC03P015936



21715919457 15921802 + IMPDH1P8
Exon structure

131961 ENSG00000224728 IMP (inosine monophosphate) dehydrogenase 1 pseudogene 8
21815920976 15921006 + GC03P015933



21915920976 15921006 + PIR35964
Exon structure




22015920976 15921006 + GC03P015932



22115920976 15921006 + GC03P015934



22215921461 15921738 + GC03P015935



22316037816 16037846 - GC03M016037



22416037858 16037901 - GC03M016038



22516014887 16431067 - GC03M016014



22616216156 16273499 + GALNT15
Exon structure
Hs.411308 117248 ENSG00000131386 polypeptide N-acetylgalactosaminyltransferase 15
22716254205 16261756 + GC03P016254



22816269421 16269957 + ENSG00000255701
Exon structure


ENSG00000255701
22916276632 16283253 + GC03P016280



23016283254 16290513 - GC03M016287



23116296576 16300952 + GC03P016296



23216298568 16306496 - DPH3
Exon structure
Hs.388087 285381 ENSG00000154813 diphthamide biosynthesis 3
23316301417 16306284 - GC03M016301



23416316566 16318139 - THAP5P2
Exon structure

100129618 ENSG00000270739 THAP domain containing 5 pseudogene 2
23516306714 16378866 + GC03P016306



23616345769 16345796 + PIR49727
Exon structure




23716306667 16391806 + OXNAD1
Exon structure
Hs.655449 92106 ENSG00000154814 oxidoreductase NAD-binding domain containing 1
23816349799 16351028 + GC03P016350



23916355946 16356494 + ENSG00000271964
Exon structure


ENSG00000271964
24016361981 16362007 + PIR59872
Exon structure




24116380815 16381378 + ENSG00000272498
Exon structure


ENSG00000272498
24216386633 16387947 + ENSG00000272529
Exon structure


ENSG00000272529
24316355081 16555533 - RFTN1
Exon structure
Hs.98910 23180 ENSG00000131378 raftlin, lipid raft linker 1
24416419560 16526342 - GC03M016419



24516518419 16518696 + GC03P016521



24616566329 16573309 + GC03P016569



24716572278 16573309 + ENSG00000269391
Exon structure


ENSG00000269391
24816569683 16581074 - GC03M016572



24916577810 16582896 + GC03P016580



25016577827 16582880 + LINC00690
Exon structure
Hs.599432 100996597 ENSG00000233570 long intergenic non-protein coding RNA 690
25116636856 16636887 - PIR37155
Exon structure




25216636856 16636887 - GC03M016638



25316661028 16661125 - ENSG00000264034
Exon structure


ENSG00000264034
25416628299 16711813 - DAZL
Exon structure
Hs.131179 1618 ENSG00000092345 deleted in azoospermia-like
25516725379 16725405 + PIR34564
Exon structure




25616729493 16738986 - ENSG00000229271
Exon structure


ENSG00000229271
25716734252 16735709 - LOC100132260
Exon structure

100132260 ENSG00000224039
25816786264 16786294 - GC03M016786



25916788296 16791151 + GC03P016788



26016974688 16974752 + MIR3714
Exon structure

100500913 ENSG00000264818 microRNA 3714
26116844159 17132098 + PLCL2
Exon structure
Hs.741267 23228 ENSG00000154822 phospholipase C-like 2
26217021919 17021948 - GC03M017021



26317022073 17022108 - GC03M017022



26417022091 17022123 + GC03P017022



26517084234 17085684 - PLCL2-AS1
Exon structure

100874003 ENSG00000226441 PLCL2 antisense RNA 1
26617131743 17136044 - GC03M017131



26717177142 17177214 - ENSG00000252976
Exon structure


ENSG00000252976
26817200474 17200500 - PIR61032
Exon structure




26917202711 17202737 - PIR31156
Exon structure




27017374618 17374923 + ENSG00000231780
Exon structure


ENSG00000231780
27117395904 17396104 + GC03P017398



27217378881 17413626 - GC03M017378



27317448653 17448778 + GC03P017451



27417506642 17507002 + GC03P017508



27517506623 17507040 + RPL31P19
Exon structure

100270985 ENSG00000227309 ribosomal protein L31 pseudogene 19
27617536278 17536304 - PIR45989
Exon structure




27717446402 17784240 - GC03M017446



27817198654 18486309 - TBC1D5
Exon structure
Hs.475629 9779 ENSG00000131374 TBC1 domain family, member 5