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  Chromosome 3

   GeneLoc map region (13,491,640 - 17,563,258 bp) around gene/marker "COLQ"

   Explanation:
   COLQ is located at 15,491,640-15,563,258 bp

    [ GeneLoc Home Page ]


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Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
113501794 13501898 - ENSG00000238138
Exon structure


ENSG00000238138
213501924 13502389 - ENSG00000223398
Exon structure


ENSG00000223398
313501791 13514100 - LOC100128772
Exon structure

100128772

413518482 13521553 - HDAC11-AS1
Exon structure

100874101 ENSG00000244502 HDAC11 antisense RNA 1
513521224 13547924 + HDAC11
Exon structure
Hs.744132 79885 ENSG00000163517 histone deacetylase 11
613564918 13564946 - PIR59377
Exon structure




713573824 13679922 + FBLN2
Exon structure
Hs.198862 2199 ENSG00000163520 fibulin 2
813652923 13653534 - GC03M013654



913689246 13695947 - LOC100293612
Exon structure
Hs.694643 100293612
Uncharacterized LOC100293612 (est)
1013691791 13695339 - GC03M013693



1113692196 13788132 + LINC00620
Exon structure
Hs.319969 285375 ENSG00000224514 long intergenic non-protein coding RNA 620
1213692220 13788132 + GC03P013694



1313759417 13759507 - ENSG00000265457
Exon structure


ENSG00000265457
1413779558 13779629 - ENSG00000238827
Exon structure


ENSG00000238827
1513858241 13859396 - GC03M013860



1613857755 13921618 - WNT7A
Exon structure
Hs.72290 7476 ENSG00000154764 wingless-type MMTV integration site family, member 7A
1713963033 13963059 + PIR44204
Exon structure




1813968310 13969275 + VN1R20P
Exon structure

100312775 ENSG00000233121 vomeronasal 1 receptor 20 pseudogene
1913976698 13976729 + PIR41787
Exon structure




2013974553 13978977 + FGD5P1
Exon structure
Hs.637770 100132526 ENSG00000250439 FYVE, RhoGEF and PH domain containing 5 pseudogene 1
2113977295 13977321 + PIR52690
Exon structure




2214007439 14007467 + PIR57574
Exon structure




2313978806 14107481 + GC03P013985



2413978756 14124311 + TPRXL
Exon structure
Hs.529180; Hs.638296 348825 ENSG00000180438 tetra-peptide repeat homeobox-like
2514130553 14131371 - VN1R21P
Exon structure

100128368 ENSG00000224752 vomeronasal 1 receptor 21 pseudogene
2614153577 14166371 - CHCHD4
Exon structure
Hs.517815 131474 ENSG00000163528 coiled-coil-helix-coiled-coil-helix domain containing 4
2714166440 14185180 + TMEM43
Exon structure
Hs.517817 79188 ENSG00000170876 transmembrane protein 43
2814178644 14189548 + ENSG00000268279
Exon structure


ENSG00000268279
2914186223 14189784 + ENSG00000228242
Exon structure


ENSG00000228242
3014186647 14220283 - XPC
Exon structure
Hs.739296; Hs.475538 7508 ENSG00000154767 xeroderma pigmentosum, complementation group C
3114219858 14242619 + LSM3
Exon structure
Hs.111632 27258 ENSG00000170860 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
3214240059 14242620 + GC03P014242



3314313873 14345345 - ENSG00000255021
Exon structure


ENSG00000255021
3414389951 14394068 - ENSG00000251576
Exon structure


ENSG00000251576
3514431282 14432524 - GC03M014433



3614436147 14436257 + GC03P014440



3714436148 14436257 + RNA5SP124
Exon structure

100873394 ENSG00000199609 RNA, 5S ribosomal pseudogene 124
3814460407 14461631 + GC03P014462



3914473896 14473959 + GC03P014475



4014444076 14530857 + SLC6A6
Exon structure
Hs.529488 6533 ENSG00000131389 solute carrier family 6 (neurotransmitter transporter), member 6
4114530619 14583588 - GRIP2
Exon structure
Hs.517819 80852 ENSG00000144596 glutamate receptor interacting protein 2
4214572489 14572595 - RNU6-905P
Exon structure

hugo3140 ENSG00000207163 RNA, U6 small nuclear 905, pseudogene
4314572488 14572595 - GC03M014574



4414605637 14605727 + GC03P014607



4514614359 14616299 - RHBDF1P1
Exon structure

131973 ENSG00000234123 rhomboid 5 homolog 1 (Drosophila) pseudogene 1
4614638046 14638076 - PIR36606
Exon structure




4714689414 14689441 - PIR36019
Exon structure




4814689701 14690939 - ENSG00000235629
Exon structure


ENSG00000235629
4914693269 14697168 + GC03P014697



5014693253 14714166 + CCDC174
Exon structure
Hs.517820 51244 ENSG00000154781 coiled-coil domain containing 174
5114721566 14721592 + PIR51472
Exon structure




5214716606 14814543 + C3orf20
Exon structure
Hs.661452 84077 ENSG00000131379 chromosome 3 open reading frame 20
5314781304 14781331 + PIR53505
Exon structure




5414806459 14808947 - ENSG00000230172
Exon structure


ENSG00000230172
5514819616 14819645 + PIR61652
Exon structure




5614840838 14852921 - ENSG00000260902
Exon structure


ENSG00000260902
5714861945 14861972 + PIR49239
Exon structure




5814860469 14976072 + FGD5
Exon structure
Hs.412406 152273 ENSG00000154783 FYVE, RhoGEF and PH domain containing 5
5914967413 14967439 + PIR33304
Exon structure




6014961854 14989931 - FGD5-AS1
Exon structure
Hs.517821 100505641 ENSG00000225733 FGD5 antisense RNA 1
6114986511 14986537 - PIR49010
Exon structure




6214986769 14986799 - GC03M014995



6314986769 14986800 - PIR56984
Exon structure




6414987449 14987476 - PIR40113
Exon structure




6515001093 15001126 + PIR42900
Exon structure




6614989091 15095107 + NR2C2
Exon structure
Hs.555973 7182 ENSG00000177463 nuclear receptor subfamily 2, group C, member 2
6715065654 15065681 + PIR57178
Exon structure




6815076092 15076122 + PIR47173
Exon structure




6915077907 15077936 + PIR44287
Exon structure




7015079741 15079767 + PIR44754
Exon structure




7115079873 15079900 - PIR51717
Exon structure




7215084496 15084524 - PIR51736
Exon structure




7315085093 15085126 + PIR60786
Exon structure




7415085133 15085159 + PIR52478
Exon structure




7515083951 15086591 - GC03M015128



7615085366 15085394 + PIR41585
Exon structure




7715085418 15085454 + PIR48726
Exon structure




7815085945 15085975 + PIR61011
Exon structure




7915086327 15086357 + PIR32293
Exon structure




8015086647 15086673 + PIR62284
Exon structure




8115086672 15086700 + PIR32782
Exon structure




8215086691 15086720 + PIR46174
Exon structure




8315086711 15086749 + PIR57972
Exon structure




8415086865 15086894 + PIR57531
Exon structure




8515087135 15087165 + PIR44895
Exon structure




8615087631 15087659 + PIR56001
Exon structure




8715087830 15087859 - PIR35570
Exon structure




8815088524 15088550 + PIR46515
Exon structure




8915088755 15088784 + GC03P015163



9015088755 15088784 + PIR36073
Exon structure




9115089239 15089269 + PIR59836
Exon structure




9215089764 15089795 - PIR34257
Exon structure




9315090072 15090100 + PIR47793
Exon structure




9415090461 15090575 + GC03P015162



9515090829 15090858 - GC03M015129



9615090829 15090858 - PIR60120
Exon structure




9715091877 15091906 - PIR37417
Exon structure




9815091890 15091917 - PIR43410
Exon structure




9915093428 15093457 - PIR32672
Exon structure




10015093674 15093700 - PIR51108
Exon structure




10115093873 15093905 - PIR50374
Exon structure




10215083967 15106842 - MRPS25
Exon structure
Hs.715617 64432 ENSG00000131368 mitochondrial ribosomal protein S25
10315087166 15106885 - PIRC12
Exon structure

100313808
piwi-interacting RNA cluster 12
10415112060 15112087 - PIR31507
Exon structure




10515119612 15119638 - PIR45543
Exon structure




10615111580 15140670 - ZFYVE20
Exon structure
Hs.706478; Hs.475565 64145 ENSG00000131381 zinc finger, FYVE domain containing 20
10715167641 15167669 - PIR45003
Exon structure




10815173343 15173715 - RPS24P10
Exon structure

100271097 ENSG00000228874 ribosomal protein S24 pseudogene 10
10915175890 15176037 - ENSG00000221424
Exon structure


ENSG00000221424
11015182863 15183711 + RPS3AP53
Exon structure

100287512 ENSG00000227578 ribosomal protein S3a pseudogene 53
11115193340 15247466 - COL6A4P1
Exon structure
Hs.722756 344875 ENSG00000230524 collagen, type VI, alpha 4 pseudogene 1
11215247659 15294425 + CAPN7
Exon structure
Hs.595234 23473 ENSG00000131375 calpain 7
11315278507 15278600 - ENSG00000252085
Exon structure


ENSG00000252085
11415299659 15299687 + PIR49400
Exon structure




11515295690 15306000 + GC03P015298



11615295691 15306000 + SH3BP5-AS1
Exon structure
Hs.745026 100505696 ENSG00000224660 SH3BP5 antisense RNA 1
11715296357 15382901 - SH3BP5
Exon structure
Hs.257761 9467 ENSG00000131370 SH3-domain binding protein 5 (BTK-associated)
11815358127 15358229 + ENSG00000238891
Exon structure


ENSG00000238891
11915381256 15381362 + RNU6-454P
Exon structure

hugo2668 ENSG00000201162 RNA, U6 small nuclear 454, pseudogene
12015381255 15381362 + GC03P015384



12115415760 15417267 - HMGN2P7
Exon structure

644498 ENSG00000226427 high mobility group nucleosomal binding domain 2 pseudogene 7
12215422782 15482073 - METTL6
Exon structure
Hs.149487 131965 ENSG00000206562 methyltransferase like 6
12315468543 15469365 + GC03P015474



12415474617 15474723 - RNU6-1024P
Exon structure

hugo1980 ENSG00000206926 RNA, U6 small nuclear 1024, pseudogene
12515474616 15474723 - GC03M015477



12615468862 15484120 + EAF1
Exon structure
Hs.716733 85403 ENSG00000144597 ELL associated factor 1
12715481218 15481245 + PIR42374
Exon structure




12815477678 15485576 - EAF1-AS1
Exon structure

100873956 ENSG00000249786 EAF1 antisense RNA 1
12915492599 15492627 - PIR34077
Exon structure




13015491640 15563258 - COLQ
Exon structure
Hs.146735 8292 ENSG00000206561 collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
13115537746 15537815 - MIR4270
Exon structure

100422868 ENSG00000263573 microRNA 4270
13215548132 15548412 - RN7SL110P
Exon structure

hugo750 ENSG00000241064 RNA, 7SL, cytoplasmic 110, pseudogene
13315549497 15549532 + PIR43678
Exon structure




13415598107 15598136 - PIR61561
Exon structure




13515602211 15643338 - HACL1
Exon structure
Hs.63290 26061 ENSG00000131373 2-hydroxyacyl-CoA lyase 1
13615642848 15687329 + BTD
Exon structure
Hs.517830 686 ENSG00000169814 biotinidase
13715710988 15711016 - PIR61991
Exon structure




13815738805 15738878 - MIR3134
Exon structure

100422990 ENSG00000264354 microRNA 3134
13915773759 15774977 + ENSG00000270409
Exon structure


ENSG00000270409
14015780021 15780317 + GC03P015785



14115780022 15780315 + RN7SL4P
Exon structure

6030 ENSG00000263740 RNA, 7SL, cytoplasmic 4, pseudogene
14215781726 15803693 + GC03P015786



14315708743 15901278 - ANKRD28
Exon structure
Hs.335239 23243 ENSG00000206560 ankyrin repeat domain 28
14415915278 15915356 + MIR563
Exon structure

693148 ENSG00000207815 microRNA 563
14515915277 15915356 + GC03P015917



14615920384 15920415 - GC03M015921



14715920384 15920415 - PIR53539
Exon structure




14815920534 15920563 + PIR43829
Exon structure




14915920534 15920563 + GC03P015930



15015919457 15921802 + IMPDH1P8
Exon structure

131961 ENSG00000224728 IMP (inosine monophosphate) dehydrogenase 1 pseudogene 8
15115920976 15921006 + PIR35964
Exon structure




15215920976 15921006 + GC03P015929



15316216156 16273499 + GALNT15
Exon structure
Hs.411308 117248 ENSG00000131386 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15
15416269421 16269957 + ENSG00000255701
Exon structure


ENSG00000255701
15516276631 16283253 + GC03P016279



15616283253 16290513 - GC03M016285



15716298568 16306496 - DPH3
Exon structure
Hs.388087 285381 ENSG00000154813 diphthamide biosynthesis 3
15816316566 16318139 - THAP5P2
Exon structure

100129618 ENSG00000270739 THAP domain containing 5 pseudogene 2
15916345769 16345796 + PIR49727
Exon structure




16016306667 16391806 + OXNAD1
Exon structure
Hs.655449 92106 ENSG00000154814 oxidoreductase NAD-binding domain containing 1
16116355946 16356494 + ENSG00000271964
Exon structure


ENSG00000271964
16216361981 16362007 + PIR59872
Exon structure




16316380815 16381378 + ENSG00000272498
Exon structure


ENSG00000272498
16416386633 16387947 + ENSG00000272529
Exon structure


ENSG00000272529
16516355081 16555533 - RFTN1
Exon structure
Hs.98910 23180 ENSG00000131378 raftlin, lipid raft linker 1
16616566328 16573120 + GC03P016568



16716572278 16573309 + ENSG00000269391
Exon structure


ENSG00000269391
16816569682 16581074 - GC03M016571



16916577810 16582880 + GC03P016579



17016577827 16582880 + LINC00690
Exon structure
Hs.599432 100996597 ENSG00000233570 long intergenic non-protein coding RNA 690
17116636856 16636887 - PIR37155
Exon structure




17216661028 16661125 - ENSG00000264034
Exon structure


ENSG00000264034
17316628299 16711813 - DAZL
Exon structure
Hs.131179 1618 ENSG00000092345 deleted in azoospermia-like
17416725379 16725405 + PIR34564
Exon structure




17516729493 16738986 - ENSG00000229271
Exon structure


ENSG00000229271
17616734255 16734939 - LOC100132260
Exon structure

100132260

17716734252 16735709 - ENSG00000224039
Exon structure


ENSG00000224039
17816974688 16974752 + MIR3714
Exon structure

100500913 ENSG00000264818 microRNA 3714
17916844159 17132098 + PLCL2
Exon structure
Hs.741267 23228 ENSG00000154822 phospholipase C-like 2
18017084234 17085684 - PLCL2-AS1
Exon structure

100874003 ENSG00000226441 PLCL2 antisense RNA 1
18117177142 17177214 - ENSG00000252976
Exon structure


ENSG00000252976
18217200474 17200500 - PIR61032
Exon structure




18317202711 17202737 - PIR31156
Exon structure




18417374618 17374923 + ENSG00000231780
Exon structure


ENSG00000231780
18517395904 17396104 + GC03P017397



18617448653 17448778 + GC03P017450



18717199898 17782399 - GC03M017203



18817506623 17507040 + RPL31P19
Exon structure

100270985 ENSG00000227309 ribosomal protein L31 pseudogene 19
18917536278 17536304 - PIR45989
Exon structure




19017198654 18486309 - TBC1D5
Exon structure
Hs.475629 9779 ENSG00000131374 TBC1 domain family, member 5