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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 21

   GeneLoc map region (41,791,996 - 45,816,955 bp) around gene/marker "TMPRSS3"

   Explanation:
   TMPRSS3 is located at 43,791,996-43,816,955 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
141792639 41793291 + GC21P041792



241382926 42219065 - DSCAM
Exon structure
Hs.397800 1826 ENSG00000171587 Down syndrome cell adhesion molecule
341861418 41861537 + GC21P041861



441885071 41885206 + ENSG00000207147
Exon structure


ENSG00000207147
541949429 41949538 + ENSG00000221396
Exon structure


ENSG00000221396
641987304 42002693 - DSCAM-IT1
Exon structure
Hs.679746 100874326 ENSG00000233756 DSCAM intronic transcript 1 (non-protein coding)
742235920 42236399 + YRDCP3
Exon structure

100861429 ENSG00000230859 yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 3
842258516 42258549 + GC21P042258



942398829 42398862 + GC21P042398



1042513427 42520060 - LINC00323
Exon structure
Hs.106234 284835 ENSG00000226496 long intergenic non-protein coding RNA 323
1142539484 42539556 + MIR3197
Exon structure

100423023 ENSG00000263681 microRNA 3197
1242552024 42552553 + BACE2-IT1
Exon structure

282569 ENSG00000224388 BACE2 intronic transcript 1 (non-protein coding)
1342547158 42558715 - PLAC4
Exon structure
Hs.472492 191585 ENSG00000225745 placenta-specific 4
1442582896 42585127 + GC21P042585



1542587721 42587748 + PIR47426
Exon structure




1642539728 42654445 + BACE2
Exon structure
Hs.529408 25825 ENSG00000182240 beta-site APP-cleaving enzyme 2
1742597403 42613830 + GC21P042597



1842602044 42613830 + GC21P042608



1942617446 42617474 - PIR40884
Exon structure




2042624392 42629253 + GC21P042627



2142617884 42647465 + GC21P042624



2242617886 42647465 + GC21P042625



2342651026 42654455 + GC21P042653



2442688286 42688495 + GC21P042694



2542691665 42691696 + PIR47206
Exon structure




2642691665 42691696 + GC21P042695



2742676139 42729654 + FAM3B
Exon structure
Hs.473877 54097 ENSG00000183844 family with sequence similarity 3, member B
2842733954 42739233 + GC21P042735



2942733870 42781317 + MX2
Exon structure
Hs.926 4600 ENSG00000183486 myxovirus (influenza virus) resistance 2 (mouse)
3042793529 42793559 - GC21M042793



3142793571 42793614 - GC21M042794



3242792231 42801848 + GC21P042793



3342792231 42831141 + MX1
Exon structure
Hs.517307 4599 ENSG00000157601 myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)
3442813321 42814669 - ENSG00000228318
Exon structure


ENSG00000228318
3542815406 42817413 + GC21P042815



3642822855 42824747 + GC21P042822



3742823116 42824742 + GC21P042830



3842835538 42836237 + GC21P042835



3942837817 42840764 - GC21M042837



4042858394 42880085 - GC21M042858



4142836478 42903043 - TMPRSS2
Exon structure
Hs.439309 7113 ENSG00000184012 transmembrane protease, serine 2
4242875698 42889236
PRED55
Exon structure

26826 ENSG00000207447
4342901716 42903025 - GC21M042901



4442903344 42903371 - GC21M042903



4542911133 42911253 + ENSG00000207503
Exon structure


ENSG00000207503
4642911132 42911253 + GC21P042914



4742931052 42934885 - ENSG00000232806
Exon structure


ENSG00000232806
4842948062 42953246 - ENSG00000223400
Exon structure


ENSG00000223400
4942953359 42954625 + GC21P042956



5043021111 43025009
PRED57
Exon structure

26826 ENSG00000207447
5143024746 43024843 - ENSG00000252771
Exon structure


ENSG00000252771
5243026485 43031418 + GC21P043026



5343030246 43044396
PRED58
Exon structure

26826 ENSG00000207447
5443099341 43117496 + LINC00111
Exon structure
Hs.570442 54090 ENSG00000227702 long intergenic non-protein coding RNA 111
5543131680 43135935 - LINC00479
Exon structure
Hs.350679 150135 ENSG00000236384 long intergenic non-protein coding RNA 479
5643135972 43138043 + GC21P043135



5743136596 43137742 + LINC00112
Exon structure
Hs.98186 54089 ENSG00000232401 long intergenic non-protein coding RNA 112
5843159533 43161468 + ENSG00000236883
Exon structure


ENSG00000236883
5943159529 43187266 - RIPK4
Exon structure
Hs.517310 54101 ENSG00000183421 receptor-interacting serine-threonine kinase 4
6043188148 43196304 + GC21P043188



6143208994 43211778 - GC21M043211



6243221817 43224883 - GC21M043221



6343248677 43257041 - GC21M043248



6443218385 43299591 - PRDM15
Exon structure
Hs.473893; Hs.726680 63977 ENSG00000141956 PR domain containing 15
6543273840 43281396
PRED59
Exon structure

26826 ENSG00000207447
6643290742 43292163 + ENSG00000236545
Exon structure


ENSG00000236545
6743294865 43297722 - ENSG00000227698
Exon structure


ENSG00000227698
6843302310 43302409 + GC21P043309



6943302314 43302409 + ENSG00000251778
Exon structure


ENSG00000251778
7043305204 43305960 + GC21P043310



7143305219 43373999 - C2CD2
Exon structure
Hs.473894; Hs.675058 25966 ENSG00000157617 C2 calcium-dependent domain containing 2
7243358915 43358950 - GC21M043358



7343373055 43373628 - GC21M043373



7443406940 43430496 - ZBTB21
Exon structure
Hs.434947 49854 ENSG00000173276 zinc finger and BTB domain containing 21
7543428076 43428103 - PIR61735
Exon structure




7643429303 43445060 + ZNF295-AS1
Exon structure
Hs.143833 150142 ENSG00000237232 ZNF295 antisense RNA 1
7743444593 43444622 + PIR52186
Exon structure




7843444593 43444622 + GC21P043449



7943446965 43447387 + GC21P043448



8043459225 43475216 + GC21P043459



8143491425 43496231 + GC21P043494



8243483068 43563563 + UMODL1
Exon structure
Hs.242520 89766 ENSG00000177398 uromodulin-like 1
8343522244 43528644 - C21orf128
Exon structure
Hs.558646 150147 ENSG00000184385 chromosome 21 open reading frame 128
8443531507 43536044 + GC21P043531



8543540629 43546506 + GC21P043540



8643588213 43588244 - GC21M043588



8743641283 43641396 + RNA5SP492
Exon structure

100873734 ENSG00000223262 RNA, 5S ribosomal pseudogene 492
8843654179 43654864 - GC21M043657



8943619799 43717354 + ABCG1
Exon structure
Hs.124649 9619 ENSG00000160179 ATP-binding cassette, sub-family G (WHITE), member 1
9043712643 43714053 + GC21P043712



9143712643 43714064 - GC21M043712



9243719104 43720919 + GC21P043722



9343720384 43720455 - ENSG00000216197
Exon structure


ENSG00000216197
9443724173 43724497 + GC21P043728



9543732163 43733796 - GC21M043732



9643731777 43735761 - TFF3
Exon structure
Hs.82961 7033 ENSG00000160180 trefoil factor 3 (intestinal)
9743719822 43748361
PRED61
Exon structure

26826 ENSG00000207447
9843733668 43735761 - GC21M043735



9943733670 43735761 + GC21P043736



10043766483 43771106 - GC21M043767



10143766466 43771237 - TFF2
Exon structure
Hs.2979 7032 ENSG00000160181 trefoil factor 2
10243782391 43786703 - TFF1
Exon structure
Hs.162807 7031 ENSG00000160182 trefoil factor 1
10343801987 43802862 - GC21M043801



10443791996 43816955 - TMPRSS3
Exon structure
Hs.208600 64699 ENSG00000160183 transmembrane protease, serine 3
10543837606 43837702 - ENSG00000252619
Exon structure


ENSG00000252619
10643824008 43867791 + UBASH3A
Exon structure
Hs.473912 53347 ENSG00000160185 ubiquitin associated and SH3 domain containing A
10743854252 43859050
PRED62
Exon structure

26826 ENSG00000207447
10843892596 43916464 - RSPH1
Exon structure
Hs.661069 89765 ENSG00000160188 radial spoke head 1 homolog (Chlamydomonas)
10943916649 43917553 + LOC101930094
Exon structure

101930094 ENSG00000239930
11043916118 43918313 + GC21P043920



11143919817 43923084 + GC21P043921



11243928734 43929771 + ENSG00000231867
Exon structure


ENSG00000231867
11343934002 43946148 + GC21P043934



11443945708 43954551 - GC21M043950



11543916118 44001550 + SLC37A1
Exon structure
Hs.547009 54020 ENSG00000160190 solute carrier family 37 (glucose-6-phosphate transporter), member 1
11643963627 43967827 + GC21P043967



11743980484 43982044 - ENSG00000235772
Exon structure


ENSG00000235772
11843992671 43994260 - GC21M043992



11944019390 44035168 - LOC101928233
Exon structure

101928233 ENSG00000225431
12044052115 44052146 - GC21M044057



12144068381 44071354 - LOC101928255
Exon structure

101928255 ENSG00000235023
12244071701 44072723 - GC21M044074



12344081206 44081241 - GC21M044084



12444073746 44195619 + PDE9A
Exon structure
Hs.473927 5152 ENSG00000160191 phosphodiesterase 9A
12544153704 44161868 - LOC101928284
Exon structure

101928284 ENSG00000225731
12644173746 44173777 - GC21M044173



12744175421 44175449 + PIR31288
Exon structure




12844199107 44199137 + GC21P044199



12944201244 44201270 - PIR43442
Exon structure




13044201184 44202343 - ENSG00000233754
Exon structure


ENSG00000233754
13144202648 44222555 + GC21P044202



13244226136 44226166 + GC21P044226



13344232380 44237997 + GC21P044235



13444251150 44256587 - ENSG00000225218
Exon structure


ENSG00000225218
13544256910 44256938 - PIR57770
Exon structure




13644263748 44263783 - GC21M044267



13744263801 44266080 - GC21M044268



13844270299 44270325 - PIR58269
Exon structure




13944263204 44299678 - WDR4
Exon structure
Hs.248815 10785 ENSG00000160193 WD repeat domain 4
14044282397 44282424 - PIR62300
Exon structure




14144282392 44299620 - GC21M044283



14244299715 44303945 + GC21P044303



14344299754 44333414 + NDUFV3
Exon structure
Hs.473937 4731 ENSG00000160194 NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa
14444321321 44321352 - GC21M044321



14544333607 44333633 + PIR40183
Exon structure




14644336913 44345756 - ERVH48-1
Exon structure

90625 ENSG00000233056 endogenous retrovirus group 48, member 1
14744336743 44345947 - GC21M044342



14844361594 44361630 - GC21M044361



14944371038 44371124 - MIR5692B
Exon structure

100847013 ENSG00000264580 microRNA 5692b
15044371728 44371756 - PIR61925
Exon structure




15144373890 44376488 + GC21P044378



15244384749 44385473 - ENSG00000224100
Exon structure


ENSG00000224100
15344386782 44386817 - GC21M044386



15444387603 44387634 - GC21M044387



15544388171 44388197 - PIR31692
Exon structure




15644394645 44427822 + GC21P044395



15744413309 44413339 + PIR59099
Exon structure




15844413309 44413339 + GC21P044415



15944394620 44453691 + PKNOX1
Exon structure
Hs.431043 5316 ENSG00000160199 PBX/knotted 1 homeobox 1
16044450651 44450678 + PIR40419
Exon structure




16144473301 44497053 - CBS
Exon structure
Hs.533013 875 ENSG00000160200 cystathionine-beta-synthase
16244495217 44496398 - GC21M044495



16344513066 44527697 - U2AF1
Exon structure
Hs.365116 7307 ENSG00000160201 U2 small nuclear RNA auxiliary factor 1
16444530921 44531328 + GC21P044531



16544532105 44532310 + GC21P044532



16644532359 44532389 - GC21M044532



16744532914 44533160 + GC21P044533



16844534386 44535371 + GC21P044534



16944535444 44535819 - GC21M044537



17044535326 44535957 - MRPL51P2
Exon structure

343819 ENSG00000232777 mitochondrial ribosomal protein L51 pseudogene 2
17144537779 44537806 + PIR38109
Exon structure




17244538453 44538896 + GC21P044538



17344542103 44542922 + GC21P044542



17444543046 44543302 + GC21P044543



17544544261 44544787 + GC21P044545



17644547630 44547729 + ENSG00000264009
Exon structure


ENSG00000264009
17744560633 44561202 - ENSG00000236663
Exon structure


ENSG00000236663
17844567973 44568003 - GC21M044567



17944565301 44571451 + GC21P044568



18044573864 44582387 - LOC100288336
Exon structure

100288336 ENSG00000228120
18144589118 44592915 + CRYAA
Exon structure
Hs.184085 1409 ENSG00000160202 crystallin, alpha A
18244592180 44592348 + GC21P044595



18344695361 44695387 + PIR31024
Exon structure




18444742297 44751919 - LINC00322
Exon structure
Hs.473952 100126693 ENSG00000237864 long intergenic non-protein coding RNA 322
18544776024 44777849 + GC21P044779



18644777430 44782327 - GC21M044782



18744778027 44782229 - LOC101928399
Exon structure

101928399 ENSG00000237989
18844783212 44786446 + FLJ41733
Exon structure
Hs.517320 400870 ENSG00000225637 FLJ41733 protein (est)
18944808523 44809763 - GC21M044816



19044810094 44810769 - GC21M044817



19144811110 44811136 - PIR50990
Exon structure




19244818608 44821739 + GC21P044820



19344834395 44847008 - SIK1
Exon structure
Hs.282113 150094 ENSG00000142178 salt-inducible kinase 1
19444864600 44873981 + GC21P044864



19544866481 44873773 + LINC00319
Exon structure
Hs.146127 284836 ENSG00000188660 long intergenic non-protein coding RNA 319
19644872957 44874433 - GC21M044873



19744875731 44877110 + GC21P044879



19844859455 44900667 - GC21M044861



19944885189 44887178 + ENSG00000223975
Exon structure


ENSG00000223975
20044884749 44888633 + GC21P044884



20144881974 44899414 - LINC00313
Exon structure
Hs.592161 114038 ENSG00000185186 long intergenic non-protein coding RNA 313
20244899979 44900008 - PIR54224
Exon structure




20344920484 44925241 - GC21M044923



20444939459 44939490 - GC21M044939



20544971110 44971481 + GC21P044974



20644971078 44971526 + RPL31P1
Exon structure

54027 ENSG00000214326 ribosomal protein L31 pseudogene 1
20744984361 44984389 - PIR31657
Exon structure




20844985093 44985119 + PIR38531
Exon structure




20944985070 44985529 + H2BFS
Exon structure

54145 ENSG00000234289 H2B histone family, member S (pseudogene)
21044997603 44997633 - GC21M044997



21144949072 45079374 - HSF2BP
Exon structure
Hs.406157 11077 ENSG00000160207 heat shock transcription factor 2 binding protein
21245079429 45115960 + RRP1B
Exon structure
Hs.565725 23076 ENSG00000160208 ribosomal RNA processing 1B
21345114322 45114348 + PIR47157
Exon structure




21445123878 45123912 - GC21M045123



21545139058 45143774 + GC21P045139



21645145464 45145498 - GC21M045145



21745141573 45158712 + GC21P045142



21845138975 45182188 + PDXK
Exon structure
Hs.284491 8566 ENSG00000160209 pyridoxal (pyridoxine, vitamin B6) kinase
21945173464 45176043 + GC21P045173



22045176090 45176119 + PIR39686
Exon structure




22145176401 45176430 + PIR45288
Exon structure




22245178614 45178641 + PIR44797
Exon structure




22345182069 45182095 + PIR43884
Exon structure




22445192393 45196326 - CSTB
Exon structure
Hs.695 1476 ENSG00000160213 cystatin B (stefin B)
22545194071 45196187 - GC21M045194



22645203004 45203454 + TMEM97P1
Exon structure

100873880 ENSG00000234030 transmembrane protein 97 pseudogene 1
22745209458 45213300 + GC21P045210



22845209394 45225174 + RRP1
Exon structure
Hs.110757 8568 ENSG00000160214 ribosomal RNA processing 1
22945225639 45232448 - LOC284837
Exon structure
Hs.592159 284837 ENSG00000215458 Uncharacterized LOC284837 (est)
23045220692 45238644 - GC21M045220



23145241894 45241922 + GC21P045241



23245242628 45242671 + GC21P045243



23345242683 45242713 + GC21P045242



23445259060 45259093 - GC21M045259



23545264331 45264364 - GC21M045264



23645266868 45266902 - GC21M045267



23745275604 45276268 - MYL6P1
Exon structure

54043 ENSG00000226543 myosin, light chain 6 pseudogene 1
23845275771 45276223 - GC21M045276



23945277251 45277285 - GC21M045277



24045286500 45287627 + GC21P045286



24145317093 45317136 - GC21M045322



24245317680 45317710 - GC21M045321



24345339676 45339782 - ENSG00000199598
Exon structure


ENSG00000199598
24445339675 45339782 - GC21M045343



24545285067 45407475 + AGPAT3
Exon structure
Hs.248785 56894 ENSG00000160216 1-acylglycerol-3-phosphate O-acyltransferase 3
24645366891 45375041 + GC21P045366



24745379670 45389148 + GC21P045379



24845386933 45386961 + PIR42091
Exon structure




24945414990 45415024 - GC21M045414



25045416203 45416301 - ENSG00000252606
Exon structure


ENSG00000252606
25145465848 45467027 - H2AFZP1
Exon structure

54049 ENSG00000213440 H2A histone family, member Z pseudogene 1
25245466228 45466922 - GC21M045467



25345469825 45469860 - GC21M045469



25445432200 45526433 + TRAPPC10
Exon structure
Hs.126221 7109 ENSG00000160218 trafficking protein particle complex 10
25545499674 45502896 + GC21P045499



25645522751 45522777 + PIR47770
Exon structure




25745527171 45551063 + PWP2
Exon structure
Hs.449076 5822 ENSG00000241945 PWP2 periodic tryptophan protein homolog (yeast)
25845550119 45550145 - PIR44712
Exon structure




25945550940 45553342 - GC21M045554



26045557066 45557092 + PIR40864
Exon structure




26145556756 45557448 + GC21P045556



26245553487 45565605 + C21orf33
Exon structure
Hs.413482 8209 ENSG00000160221 chromosome 21 open reading frame 33
26345565383 45565410 + PIR47010
Exon structure




26445576307 45580684 - GC21M045580



26545578623 45579959 - LOC101928576
Exon structure

101928576 ENSG00000225331
26645585690 45585719 + PIR52063
Exon structure




26745587386 45588356 - GC21M045597



26845587818 45593580 - ENSG00000267913
Exon structure


ENSG00000267913
26945595372 45596336 + ENSG00000237604
Exon structure


ENSG00000237604
27045593932 45608380 - GC21M045598



27145610322 45614187 - GC21M045613



27245619132 45621216 - GC21M045627



27345621173 45622579 + ENSG00000232124
Exon structure


ENSG00000232124
27445621679 45627282 - GC21M045628



27545626408 45627282 - ENSG00000232698
Exon structure


ENSG00000232698
27645627833 45629968 + GC21P045630



27745642874 45660849 - ICOSLG
Exon structure
Hs.14155 23308 ENSG00000160223 inducible T-cell co-stimulator ligand
27845653752 45653779 + PIR49071
Exon structure




27945664886 45672764 + GC21P045664



28045670696 45671403 + ENSG00000232010
Exon structure


ENSG00000232010
28145666222 45682099 - DNMT3L
Exon structure
Hs.592165 29947 ENSG00000142182 DNA (cytosine-5-)-methyltransferase 3-like
28245683046 45683314 + GC21P045683



28345705721 45718531 + AIRE
Exon structure
Hs.129829 326 ENSG00000160224 autoimmune regulator
28445710638 45717872 + GC21P045710



28545724805 45724832 + PIR46789
Exon structure




28645719925 45747261 + PFKL
Exon structure
Hs.255093 5211 ENSG00000141959 phosphofructokinase, liver
28745748827 45750104 - ENSG00000241728
Exon structure


ENSG00000241728
28845751119 45751543 + ENSG00000255902
Exon structure


ENSG00000255902
28945751845 45753347 - GC21M045751



29045751117 45755734 + ENSG00000184441
Exon structure


ENSG00000184441
29145748827 45759285 - C21orf2
Exon structure
Hs.517331 755 ENSG00000160226 chromosome 21 open reading frame 2
29245759259 45760353 + ENSG00000232969
Exon structure


ENSG00000232969
29345767650 45768178 - ENSG00000260256
Exon structure


ENSG00000260256
29445768432 45768458 - PIR42743
Exon structure




29545777303 45777329 - PIR42451
Exon structure




29645770046 45862964 + TRPM2
Exon structure
Hs.369759 7226 ENSG00000142185 transient receptor potential cation channel, subfamily M, member 2