an academic website of the in association with
GeneLoc Home GeneCards Home MalaCards Home About GeneLoc Contact Us
Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 20

   GeneLoc map region (55,226,309 - 59,254,582 bp) around gene/marker "STX16"

   Explanation:
   STX16 is located at 57,226,309-57,254,582 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
155242486 55242587 + ENSG00000252091
Exon structure


ENSG00000252091
255260400 55261952 + GC20P055260



355263457 55263749 + RN7SL170P
Exon structure

hugo924 ENSG00000241821 RNA, 7SL, cytoplasmic 170, pseudogene
455275893 55276570 - PTMAP6
Exon structure

170542 ENSG00000237000 prothymosin, alpha pseudogene 6
555293942 55294025 + ENSG00000221416
Exon structure


ENSG00000221416
655305453 55306516 - GC20M055307



755305453 55306516 + ENSG00000231604
Exon structure


ENSG00000231604
855311281 55313698 + GC20P055311



955361037 55361143 - ENSG00000207158
Exon structure


ENSG00000207158
1055361036 55361143 - GC20M055373



1155450000 55460720 - GC20M055450



1255575143 55575213 + ENSG00000251772
Exon structure


ENSG00000251772
1355624871 55626365 - GC20M055624



1455629846 55629897 + ENSG00000238644
Exon structure


ENSG00000238644
1555680797 55682184 + ENSG00000231078
Exon structure


ENSG00000231078
1655689971 55697148 + ENSG00000203266
Exon structure


ENSG00000203266
1755731074 55737430 - GC20M055731



1855736877 55738831 + GC20P055741



1955752752 55762212 - GC20M055753



2055777530 55799896 - GC20M055778



2155788782 55790909 + GC20P055788



2255789928 55790922 + ENSG00000235032
Exon structure


ENSG00000235032
2355743804 55841707 - BMP7
Exon structure
Hs.473163 655 ENSG00000101144 bone morphogenetic protein 7
2455823694 55823720 + PIR47382
Exon structure




2555841853 55858054 + LOC101927820
Exon structure

101927820 ENSG00000226308
2655858303 55858334 - GC20M055860



2755858303 55858334 - PIR49257
Exon structure




2855849537 55869440 - GC20M055853



2955886909 55887012 + GC20P055890



3055886910 55887014 + ENSG00000252064
Exon structure


ENSG00000252064
3155896558 55896647 - MIR4325
Exon structure

100422883 ENSG00000266666 microRNA 4325
3255903602 55903752 + RPL39P39
Exon structure

100271530 ENSG00000231005 ribosomal protein L39 pseudogene 39
3355904815 55919050 + SPO11
Exon structure
Hs.159737 23626 ENSG00000054796 SPO11 meiotic protein covalently bound to DSB
3455924075 55924117 - GC20M055924



3555932482 55933425 - MTND1P9
Exon structure

100873221 ENSG00000228995 MT-ND1 pseudogene 9
3655933427 55933502 - GC20M055960



3755933428 55933502 - TRNAL42P
Exon structure

100189466
transfer RNA leucine 42 (anticodon UAA) pseudogene
3855933496 55934878 - MTRNR2L3
Exon structure
Hs.727477 100462983 ENSG00000256222 MT-RNR2-like 3
3955926066 55954267 + RAE1
Exon structure
Hs.371698 8480 ENSG00000101146 ribonucleic acid export 1
4055946190 55953519 + GC20P055946



4155959216 55968118 - LOC100291105
Exon structure
Hs.638423 100291105 ENSG00000218018 Uncharacterized LOC100291105 (est)
4255966454 55984389 + RBM38
Exon structure
Hs.236361 55544 ENSG00000132819 RNA binding motif protein 38
4356033220 56033247 + PIR61563
Exon structure




4456062997 56064186 - HMGB1P1
Exon structure

10357 ENSG00000124097 high mobility group box 1 pseudogene 1
4556071035 56100708 - CTCFL
Exon structure
Hs.131543 140690 ENSG00000124092 CCCTC-binding factor (zinc finger protein)-like
4656130114 56134053 - GC20M056135



4756136159 56137363 + GC20P056137



4856137890 56138647 + GC20P056138



4956136136 56141513 + PCK1
Exon structure
Hs.1872 5105 ENSG00000124253 phosphoenolpyruvate carboxykinase 1 (soluble)
5056151411 56151531 + GC20P056153



5156155979 56157804 + GC20P056155



5256174751 56176256 - ENSG00000227297
Exon structure


ENSG00000227297
5356182509 56182535 + PIR54964
Exon structure




5456178902 56195632 - ZBP1
Exon structure
Hs.302123 81030 ENSG00000124256 Z-DNA binding protein 1
5556189960 56195536 - GC20M056189



5656224091 56224500 + GC20P056225



5756224548 56224982 - GC20M056233



5856224548 56224992 - GC20M056232



5956223448 56286592 - PMEPA1
Exon structure
Hs.517155 56937 ENSG00000124225 prostate transmembrane protein, androgen induced 1
6056285238 56288784 + GC20P056293



6156343879 56357386 + GC20P056343



6256408042 56410058 - GC20M056408



6356470450 56470500 + MIR4532
Exon structure

100616353 ENSG00000263453 microRNA 4532
6456472120 56475982 + GC20P056473



6556493940 56494091 + ENSG00000221007
Exon structure


ENSG00000221007
6656532182 56534716 - ENSG00000203971
Exon structure


ENSG00000203971
6756551074 56551149 + ENSG00000221451
Exon structure


ENSG00000221451
6856578910 56579695 + GC20P056581



6956642512 56642663 + ENSG00000221385
Exon structure


ENSG00000221385
7056644110 56647126 - ENSG00000225708
Exon structure


ENSG00000225708
7156672323 56672647 + GC20P056673



7256672278 56675330 + HSPD1P19
Exon structure

100463288 ENSG00000270411 heat shock 60kDa protein 1 (chaperonin) pseudogene 19
7356725960 56736206 + C20orf85
Exon structure
Hs.43977 128602 ENSG00000124237 chromosome 20 open reading frame 85
7456739117 56747176 - GC20M056742



7556793551 56803709 - ANKRD60
Exon structure

140731 ENSG00000124227 ankyrin repeat domain 60
7656806323 56807952 + GC20P056806



7756807860 56810943 - GC20M056807



7856806188 56884495 - PPP4R1L
Exon structure
Hs.473179 55370 ENSG00000124224 protein phosphatase 4, regulatory subunit 1-like
7956822112 56871414 + GC20P056825



8056814811 56884370 - GC20M056814



8156892217 56892252 - GC20M056892



8256884814 56921104 + GC20P056885



8356884752 56942563 + RAB22A
Exon structure
Hs.529044 57403 ENSG00000124209 RAB22A, member RAS oncogene family
8456925995 56926023 + PIR40663
Exon structure




8556937951 56941646 - GC20M056937



8656940782 56940817 - GC20M056940



8756964175 57026157 + VAPB
Exon structure
Hs.182625 9217 ENSG00000124164 VAMP (vesicle-associated membrane protein)-associated protein B and C
8857022461 57026150 + GC20P057023



8957036181 57037036 - GC20M057036



9057034157 57090187 - APCDD1L
Exon structure
Hs.119286 164284 ENSG00000198768 adenomatosis polyposis coli down-regulated 1-like
9157091221 57091843 - GC20M057091



9257090435 57194948 + APCDD1L-AS1
Exon structure
Hs.685214 149773 ENSG00000231290 APCDD1L antisense RNA 1 (head to head)
9357169473 57179029 + ENSG00000254620
Exon structure


ENSG00000254620
9457180140 57180283 + ENSG00000221174
Exon structure


ENSG00000221174
9557208606 57208632 - PIR40957
Exon structure




9657209827 57210794 + MGC4294
Exon structure
Hs.280135 79160 ENSG00000268941 Uncharacterized MGC4294 (est)
9757223663 57226308 - GC20M057223



9857226309 57254582 + STX16
Exon structure
Hs.307913 8675 ENSG00000124222 syntaxin 16
9957252219 57252419 + GC20P057258



10057252235 57252874 + GC20P057259



10157254236 57254265 + PIR50186
Exon structure




10257248694 57267262 + GC20P057248



10357226309 57290900 + STX16-NPEPL1
Exon structure

100534593 ENSG00000254995 STX16-NPEPL1 readthrough (NMD candidate)
10457265873 57267532 - GC20M057265



10557264187 57294294 + NPEPL1
Exon structure
Hs.654868 79716 ENSG00000215440 aminopeptidase-like 1
10657285851 57286689 + ENSG00000254419
Exon structure


ENSG00000254419
10757292420 57294287 + LOC100652930
Exon structure
Hs.554211 100652930
Uncharacterized LOC100652930 (est)
10857329407 57331894 + ENSG00000270279
Exon structure


ENSG00000270279
10957315588 57358877 - PIEZO1P2
Exon structure

100874493 ENSG00000237121 piezo-type mechanosensitive ion channel component 1 pseudogene 2
11057348470 57349748 + GC20P057349



11157369608 57378847 + GC20P057369



11257378609 57378639 + PIR62878
Exon structure




11357378609 57378639 + GC20P057380



11457392670 57392749 - MIR296
Exon structure

407022 ENSG00000268649 microRNA 296
11557392669 57392749 - GC20M057404



11657393281 57393368 - MIR298
Exon structure

100126296 ENSG00000216031 microRNA 298
11757393973 57425958 - GNAS-AS1
Exon structure
Hs.122718 149775 ENSG00000235590 GNAS antisense RNA 1
11857408864 57411584 - ENSG00000268333
Exon structure


ENSG00000268333
11957405765 57414772 - GC20M057405



12057417084 57417158 + GC20P057419



12157416398 57480475 + GC20P057416



12257414773 57486250 + GNAS
Exon structure
Hs.125898 2778 ENSG00000087460 GNAS complex locus
12357438583 57463864 - LOC101927932
Exon structure

101927932 ENSG00000225806
12457451647 57452036 - ENSG00000270951
Exon structure


ENSG00000270951
12557476354 57476982 - GC20M057477



12657483971 57484770 + GC20P057483



12757485063 57485836 + GC20P057485



12857486023 57486241 - GC20M057494



12957503399 57503434 - GC20M057503



13057553417 57553443 - PIR46436
Exon structure




13157556330 57561816 + GC20P057558



13257560741 57562496 - GC20M057564



13357556263 57570188 + NELFCD
Exon structure
Hs.517148 51497 ENSG00000101158 negative elongation factor complex member C/D
13457565150 57570188 + GC20P057565



13557570240 57582309 - CTSZ
Exon structure
Hs.252549 1522 ENSG00000101160 cathepsin Z
13657581097 57582160 - GC20M057581



13757594309 57601709 + TUBB1
Exon structure
Hs.303023 81027 ENSG00000101162 tubulin, beta 1 class VI
13857600522 57607437 - ATP5E
Exon structure
Hs.177530 514 ENSG00000124172 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
13957603733 57617901 - GC20M057606



14057603733 57617901 - SLMO2-ATP5E
Exon structure

100533975 ENSG00000236105
14157608200 57617964 - SLMO2
Exon structure
Hs.656865 51012 ENSG00000101166 slowmo homolog 2 (Drosophila)
14257688130 57688987 + MRPS16P2
Exon structure

128609 ENSG00000232925 mitochondrial ribosomal protein S16 pseudogene 2
14357720964 57734733 + GC20P057720



14457766075 57834168 + ZNF831
Exon structure
Hs.473204 128611 ENSG00000124203 zinc finger protein 831
14557849906 57858091 - GC20M057849



14657875482 57901047 + EDN3
Exon structure
Hs.1408 1908 ENSG00000124205 endothelin 3
14757921434 57921535 - ENSG00000263903
Exon structure


ENSG00000263903
14857927250 57932829 - ENSG00000225129
Exon structure


ENSG00000225129
14957935982 57939828 - ENSG00000230352
Exon structure


ENSG00000230352
15058029827 58029858 - GC20M058029



15158035674 58035892 - PIEZO1P1
Exon structure

128615 ENSG00000233686 piezo-type mechanosensitive ion channel component 1 pseudogene 1
15258042934 58044890 - GC20M058043



15358090246 58091094 + ENSG00000227282
Exon structure


ENSG00000227282
15458151116 58151146 - PIR48501
Exon structure




15558151116 58151146 - GC20M058154



15658201519 58203344 - LOC100506384
Exon structure
Hs.663924 100506384 ENSG00000238194 Uncharacterized LOC100506384 (est)
15758152564 58422766 + PHACTR3
Exon structure
Hs.473218 116154 ENSG00000087495 phosphatase and actin regulator 3
15858338306 58338337 - GC20M058338



15958418510 58422766 + GC20P058418



16058427722 58427783 - RNU7-141P
Exon structure

hugo3425 ENSG00000238777 RNA, U7 small nuclear 141 pseudogene
16158455374 58461866 - GC20M058455



16258438618 58508710 - SYCP2
Exon structure
Hs.202676 10388 ENSG00000196074 synaptonemal complex protein 2
16358486824 58490744 - GC20M058486



16458494372 58496538 - GC20M058494



16558507504 58507538 - GC20M058507



16658511887 58515352 - PPP1R3D
Exon structure
Hs.42215 5509 ENSG00000132825 protein phosphatase 1, regulatory subunit 3D
16758508819 58523735 + FAM217B
Exon structure
Hs.54973 63939 ENSG00000196227 family with sequence similarity 217, member B
16858533471 58609066 + CDH26
Exon structure
Hs.729046 60437 ENSG00000124215 cadherin 26
16958630980 58648008 + C20orf197
Exon structure
Hs.335319 284756 ENSG00000176659 chromosome 20 open reading frame 197
17058656497 58662619 - GC20M058660



17158661762 58661793 - PIR38189
Exon structure




17258661762 58661793 - GC20M058663



17358815386 58815415 + PIR59955
Exon structure




17458833020 58845150 + GC20P058833



17558662895 59102516 + RP5-1043L13.1
Exon structure
Hs.737441 284757 ENSG00000228340 Uncharacterized LOC284757 (est)
17658662895 59102516 + EGID-729296
Exon structure
Hs.534781 729296 ENSG00000228340 Uncharacterized LOC729296 (est)
17758883114 58883447 + GC20P058887



17858883531 58883625 + GC20P058886



17958883532 58883625 + MIR646
Exon structure

693231 ENSG00000207802 microRNA 646
18058907456 58909955 - GC20M058910



18158658559 59228976 + GC20P058658



18258952161 58957895 + GC20P058952



18358989454 58989930 - MTCO2P1
Exon structure

140909 ENSG00000229690 MT-CO2 pseudogene 1
18459044039 59048080 - GC20M059047



18559048187 59050185 + GC20P059051



18659049459 59055732 + GC20P059050



18759053169 59053239 + MIR4533
Exon structure

100616362 ENSG00000266140 microRNA 4533
18859101555 59101586 + GC20P059101



18959139620 59139683 + MIR548AG2
Exon structure

100616440 ENSG00000265617 microRNA 548ag-2
19059150509 59150541 - GC20M059151