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  Chromosome 20

   GeneLoc map region (42,746,906 - 46,758,502 bp) around gene/marker "CD40"

   Explanation:
   CD40 is located at 44,746,906-44,758,502 bp

    [ GeneLoc Home Page ]


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Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
142740335 42816218 - JPH2
Exon structure
Hs.441737 57158 ENSG00000149596 junctophilin 2
242788791 42816218 - GC20M042790



342824579 42839546 - OSER1
Exon structure
Hs.75798 51526 ENSG00000132823 oxidative stress responsive serine-rich 1
442839599 42854667 + GC20P042843



542839600 42854667 + OSER1-AS1
Exon structure
Hs.159049 100505783 ENSG00000223891 OSER1 antisense RNA 1 (head to head)
642875887 42909013 + GDAP1L1
Exon structure
Hs.517059 78997 ENSG00000124194 ganglioside induced differentiation associated protein 1-like 1
742931478 42939889 - FITM2
Exon structure
Hs.632269 128486 ENSG00000197296 fat storage-inducing transmembrane protein 2
842965626 42979875 + R3HDML
Exon structure
Hs.580807 140902 ENSG00000101074 R3H domain containing-like
942973478 42973570 + GC20P042976



1042973479 42973569 + ENSG00000201363
Exon structure


ENSG00000201363
1142976192 42983825 - ENSG00000226812
Exon structure


ENSG00000226812
1242985321 42987684 - GC20M042987



1343006382 43024346 - GC20M043007



1443006383 43024346 - ENSG00000229005
Exon structure


ENSG00000229005
1543018264 43020177 - ENSG00000233376
Exon structure


ENSG00000233376
1642984340 43060030 + HNF4A
Exon structure
Hs.116462 3172 ENSG00000101076 hepatocyte nuclear factor 4, alpha
1743036760 43036843 + MIR3646
Exon structure

100500813 ENSG00000266151 microRNA 3646
1843053692 43053781 - ENSG00000265893
Exon structure


ENSG00000265893
1943077417 43078732 - ENSG00000237907
Exon structure


ENSG00000237907
2043080624 43093984 - C20orf62
Exon structure
Hs.357589 140834 ENSG00000168746 chromosome 20 open reading frame 62
2143095143 43095513 - RPL37AP1
Exon structure

140717 ENSG00000226243 ribosomal protein L37a pseudogene 1
2243104526 43123244 + TTPAL
Exon structure
Hs.283869 79183 ENSG00000124120 tocopherol (alpha) transfer protein-like
2343114539 43114565 - PIR42438
Exon structure




2443121163 43121191 + PIR37618
Exon structure




2543122774 43122804 + PIR46342
Exon structure




2643126835 43126861 - PIR60204
Exon structure




2743128381 43128411 - PIR36658
Exon structure




2843124862 43150750 - SERINC3
Exon structure
Hs.272168 10955 ENSG00000132824 serine incorporator 3
2943160426 43252888 + PKIG
Exon structure
Hs.472831 11142 ENSG00000168734 protein kinase (cAMP-dependent, catalytic) inhibitor gamma
3043234346 43248126 - ENSG00000269605
Exon structure


ENSG00000269605
3143249607 43249635 + PIR61280
Exon structure




3243255321 43255349 + PIR48727
Exon structure




3343248163 43280874 - ADA
Exon structure
Hs.654536 100 ENSG00000196839 adenosine deaminase
3443285092 43324737 - LOC79015
Exon structure
Hs.671450; Hs.731918 79015 ENSG00000132832 Uncharacterized LOC79015; Uncharacterized LOC79015 (est)
3543323533 43374662 - ENSG00000244558
Exon structure


ENSG00000244558
3643343485 43357150 + WISP2
Exon structure
Hs.592145 8839 ENSG00000064205 WNT1 inducible signaling pathway protein 2
3743374421 43380954 + KCNK15
Exon structure
Hs.528664 60598 ENSG00000124249 potassium channel, subfamily K, member 15
3843381650 43381676 - PIR49731
Exon structure




3943380445 43438979 - RIMS4
Exon structure
Hs.517065 140730 ENSG00000101098 regulating synaptic membrane exocytosis 4
4043470566 43471189 - PGBD4P2
Exon structure

100421228
piggyBac transposable element derived 4 pseudogene 2
4143509478 43509775 - GC20M043516



4243509479 43509775 - RN7SL31P
Exon structure

hugo978 ENSG00000263911 RNA, 7SL, cytoplasmic 31, pseudogene
4343509455 43510396 + GC20P043512



4443514317 43537173 + YWHAB
Exon structure
Hs.643544 7529 ENSG00000166913 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
4543538703 43587676 + PABPC1L
Exon structure
Hs.641481 80336 ENSG00000101104 poly(A) binding protein, cytoplasmic 1-like
4643570771 43589127 - TOMM34
Exon structure
Hs.517066 10953 ENSG00000025772 translocase of outer mitochondrial membrane 34
4743592435 43595099 - STK4-AS1
Exon structure
Hs.196065 100505826 ENSG00000227477 STK4 antisense RNA 1 (head to head)
4843610521 43623802 + GC20P043613



4943632989 43633095 + ENSG00000252021
Exon structure


ENSG00000252021
5043595115 43708600 + STK4
Exon structure
Hs.472838 6789 ENSG00000101109 serine/threonine kinase 4
5143704444 43704472 + PIR48188
Exon structure




5243704948 43704977 + PIR51876
Exon structure




5343723714 43723828 - GC20M043726



5443720950 43729753 - KCNS1
Exon structure
Hs.117780 3787 ENSG00000124134 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
5543738093 43743813 - WFDC5
Exon structure
Hs.375031 149708 ENSG00000175121 WAP four-disulfide core domain 5
5643752066 43753106 - WFDC12
Exon structure
Hs.352180 128488 ENSG00000168703 WAP four-disulfide core domain 12
5743766346 43767617 - GC20M043769



5843803517 43805185 + PI3
Exon structure
Hs.112341 5266 ENSG00000124102 peptidase inhibitor 3, skin-derived
5943808662 43821571 + GC20P043814



6043835673 43836890 + GC20P043843



6143835674 43836916 + GC20P043844



6243835638 43838414 + SEMG1
Exon structure
Hs.1968 6406 ENSG00000124233 semenogelin I
6343849941 43853099 + SEMG2
Exon structure
Hs.537218 6407 ENSG00000124157 semenogelin II
6443858458 43858832 + ENSG00000233352
Exon structure


ENSG00000233352
6543859509 43861972 + ENSG00000243995
Exon structure


ENSG00000243995
6643880879 43883206 - SLPI
Exon structure
Hs.517070 6590 ENSG00000124107 secretory leukocyte peptidase inhibitor
6743922085 43937169 - MATN4
Exon structure
Hs.278489 8785 ENSG00000124159 matrilin 4
6843935491 43946464 + RBPJL
Exon structure
Hs.248217 11317 ENSG00000124232 recombination signal binding protein for immunoglobulin kappa J region-like
6943946212 43946239 + PIR62059
Exon structure




7043951001 43951073 + TRNAV33P
Exon structure

100189477
transfer RNA valine 33 (anticodon CAC) pseudogene
7143953928 43977064 - SDC4
Exon structure
Hs.632267 6385 ENSG00000124145 syndecan 4
7243990577 44005442 + SYS1
Exon structure
Hs.655055 90196 ENSG00000204070 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
7343991809 44039250 + SYS1-DBNDD2
Exon structure

767557 ENSG00000254806 SYS1-DBNDD2 readthrough (NMD candidate)
7444016987 44017345 - ENSG00000232880
Exon structure


ENSG00000232880
7544002520 44036529 - TP53TG5
Exon structure
Hs.710271 27296 ENSG00000124251 TP53 target 5
7644034633 44039250 + DBNDD2
Exon structure
Hs.730643 55861 ENSG00000244274 dysbindin (dystrobrevin binding protein 1) domain containing 2
7744044707 44054884 + PIGT
Exon structure
Hs.437388 51604 ENSG00000124155 phosphatidylinositol glycan anchor biosynthesis, class T
7844074071 44077220 + LOC100130157
Exon structure
Hs.729907 100130157 ENSG00000269549 Uncharacterized LOC100130157 (est)
7944076042 44076982 + ENSG00000234011
Exon structure


ENSG00000234011
8044082664 44083773 - GC20M044084



8144080764 44089845 + GC20P044082



8244095910 44107452 - ENSG00000268111
Exon structure


ENSG00000268111
8344098346 44110172 + WFDC2
Exon structure
Hs.2719 10406 ENSG00000101443 WAP four-disulfide core domain 2
8444116295 44116321 - PIR40923
Exon structure




8544116253 44118888 + ENSG00000237464
Exon structure


ENSG00000237464
8644119458 44120311 - RPL5P2
Exon structure

140749 ENSG00000237068 ribosomal protein L5 pseudogene 2
8744141101 44144264 - SPINT3
Exon structure
Hs.370724 10816 ENSG00000101446 serine peptidase inhibitor, Kunitz type, 3
8844162835 44168134 - WFDC6
Exon structure
Hs.673237 140870 ENSG00000243543 WAP four-disulfide core domain 6
8944165435 44165653 - ENSG00000232135
Exon structure


ENSG00000232135
9044168614 44168925 - HSPD1P21
Exon structure

100462990 ENSG00000229900 heat shock 60kDa protein 1 (chaperonin) pseudogene 21
9144164919 44176065 - EPPIN-WFDC6
Exon structure

100526773 ENSG00000249139 EPPIN-WFDC6 readthrough
9244165625 44176391 - EPPIN
Exon structure
Hs.121084 57119 ENSG00000101448 epididymal peptidase inhibitor
9344174325 44176040 - GC20M044185



9444188396 44188515 - GC20M044192



9544188397 44188515 - RNA5SP485
Exon structure

100873727 ENSG00000201923 RNA, 5S ribosomal pseudogene 485
9644179791 44207965 - WFDC8
Exon structure
Hs.116128 90199 ENSG00000158901 WAP four-disulfide core domain 8
9744196629 44197446 - CCNB1IP1P2
Exon structure

100505892 ENSG00000230860 cyclin B1 interacting protein 1 pseudogene 2
9844216629 44218039 - GC20M044218



9944230449 44233283 - GC20M044232



10044236578 44259907 - WFDC9
Exon structure
Hs.249828 259240 ENSG00000180205 WAP four-disulfide core domain 9
10144258165 44259835 + WFDC10A
Exon structure
Hs.199380 140832 ENSG00000180305 WAP four-disulfide core domain 10A
10244269090 44270032 - RPS2P7
Exon structure

86781 ENSG00000235508 ribosomal protein S2 pseudogene 7
10344277202 44298909 - WFDC11
Exon structure
Hs.374924 259239 ENSG00000180083 WAP four-disulfide core domain 11
10444313290 44333658 - WFDC10B
Exon structure
Hs.237392 280664 ENSG00000182931 WAP four-disulfide core domain 10B
10544333741 44333819 - MIR3617
Exon structure

100500897 ENSG00000266071 microRNA 3617
10644330655 44337456 + WFDC13
Exon structure
Hs.690734; Hs.406733 164237 ENSG00000168634 WAP four-disulfide core domain 13
10744350988 44354469 + SPINT4
Exon structure
Hs.677891 391253 ENSG00000149651 serine peptidase inhibitor, Kunitz type 4
10844374198 44374926 - HNRNPA1P3
Exon structure

170524 ENSG00000226188 heterogeneous nuclear ribonucleoprotein A1 pseudogene 3
10944378559 44378713 + SPINT5P
Exon structure

140863 ENSG00000168630 serine peptidase inhibitor, Kunitz type 5, pseudogene
11044376583 44420571 - WFDC3
Exon structure
Hs.419126 140686 ENSG00000124116 WAP four-disulfide core domain 3
11144407336 44407462 + GC20P044411



11244407337 44407462 + RNU6ATAC38P
Exon structure

hugo3273 ENSG00000221046 RNA, U6atac small nuclear 38, pseudogene
11344420576 44440066 + DNTTIP1
Exon structure
Hs.472852 116092 ENSG00000101457 deoxynucleotidyltransferase, terminal, interacting protein 1
11444441215 44445596 + UBE2C
Exon structure
Hs.93002 11065 ENSG00000175063 ubiquitin-conjugating enzyme E2C
11544451853 44462384 - TNNC2
Exon structure
Hs.182421 7125 ENSG00000101470 troponin C type 2 (fast)
11644462449 44471914 + SNX21
Exon structure
Hs.472854 90203 ENSG00000124104 sorting nexin family member 21
11744470477 44470503 + PIR61038
Exon structure




11844470360 44486048 - ACOT8
Exon structure
Hs.444776 10005 ENSG00000101473 acyl-CoA thioesterase 8
11944486220 44507770 + ZSWIM3
Exon structure
Hs.292135 140831 ENSG00000132801 zinc finger, SWIM-type containing 3
12044509848 44513905 + ZSWIM1
Exon structure
Hs.517075 90204 ENSG00000168612 zinc finger, SWIM-type containing 1
12144515128 44516274 - SPATA25
Exon structure
Hs.128235 128497 ENSG00000149634 spermatogenesis associated 25
12244517264 44519926 - NEURL2
Exon structure

140825 ENSG00000124257 neuralized homolog 2 (Drosophila)
12344521333 44522058 - ENSG00000271984
Exon structure


ENSG00000271984
12444518783 44527459 + CTSA
Exon structure
Hs.609336 5476 ENSG00000064601 cathepsin A
12544527259 44541003 - PLTP
Exon structure
Hs.439312 5360 ENSG00000100979 phospholipid transfer protein
12644543294 44544555 - GC20M044545



12744563267 44576662 + PCIF1
Exon structure
Hs.472856 63935 ENSG00000100982 PDX1 C-terminal inhibiting factor 1
12844577292 44600833 - ZNF335
Exon structure
Hs.174193 63925 ENSG00000198026 zinc finger protein 335
12944603756 44604907 - FTLP1
Exon structure

170514 ENSG00000235525 ferritin, light polypeptide pseudogene 1
13044604856 44604886 - GC20M044612



13144637547 44645200 + MMP9
Exon structure
Hs.297413 4318 ENSG00000100985 matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
13244644111 44644231 + ENSG00000203346
Exon structure


ENSG00000203346
13344642139 44650712 - LOC100128028
Exon structure
Hs.675276 100128028 ENSG00000204044 Uncharacterized LOC100128028 (est)
13444650415 44656438 + ENSG00000240742
Exon structure


ENSG00000240742
13544656393 44656420 + PIR40089
Exon structure




13644650329 44688789 + SLC12A5
Exon structure
Hs.21413 57468 ENSG00000124140 solute carrier family 12 (potassium/chloride transporter), member 5
13744690764 44690792 - PIR58425
Exon structure




13844689624 44718591 - NCOA5
Exon structure
Hs.654991 57727 ENSG00000124160 nuclear receptor coactivator 5
13944721561 44721590 + PIR33346
Exon structure




14044722079 44722106 + PIR59850
Exon structure




14144728114 44728832 + RPL13P2
Exon structure

128500 ENSG00000213820 ribosomal protein L13 pseudogene 2
14244746906 44758502 + CD40
Exon structure
Hs.472860 958 ENSG00000101017 CD40 molecule, TNF receptor superfamily member 5
14344797043 44799876 - ENSG00000229957
Exon structure


ENSG00000229957
14444802372 44937137 - CDH22
Exon structure
Hs.472861 64405 ENSG00000149654 cadherin 22, type 2
14544946468 44946657 + GC20P044948



14644963602 44968432 - GC20M044965



14744978167 44993064 - SLC35C2
Exon structure
Hs.593344 51006 ENSG00000080189 solute carrier family 35 (GDP-fucose transporter), member C2
14844987233 44987262 - PIR48117
Exon structure




14945015985 45017736 - GC20M045017



15044994688 45061704 - ELMO2
Exon structure
Hs.210469 63916 ENSG00000062598 engulfment and cell motility 2
15145042867 45087915 - ENSG00000215452
Exon structure


ENSG00000215452
15245042868 45088009 - GC20M045044



15345062279 45074923 + GC20P045065



15445092299 45093931 - MKRN7P
Exon structure
Hs.717103 7686 ENSG00000225849 makorin ring finger protein 7, pseudogene
15545092300 45093931 - GC20M045101



15645113100 45121279 + ZNF840
Exon structure

100130863 ENSG00000184617 zinc finger protein 840
15745119579 45120931 + LOC100533646
Exon structure

100533646

15845129701 45142198 - ZNF334
Exon structure
Hs.147041 55713 ENSG00000198185 zinc finger protein 334
15945169585 45179213 - OCSTAMP
Exon structure
Hs.526636 128506 ENSG00000149635 osteoclast stimulatory transmembrane protein
16045186462 45313124 - SLC13A3
Exon structure
Hs.655498 64849 ENSG00000158296 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
16145313004 45318418 - TP53RK
Exon structure
Hs.440263 112858 ENSG00000172315 TP53 regulating kinase
16245318298 45318928 + ENSG00000271784
Exon structure


ENSG00000271784
16345338126 45364986 + SLC2A10
Exon structure
Hs.305971 81031 ENSG00000197496 solute carrier family 2 (facilitated glucose transporter), member 10
16445354924 45362728 + GC20P045357



16545439477 45439561 - ENSG00000266136
Exon structure


ENSG00000266136
16645454079 45474478 - GC20M045456



16745487972 45488311 + RN7SKP33
Exon structure

hugo672 ENSG00000222874 RNA, 7SK small nuclear pseudogene 33
16845492184 45492743 - RPL13P14
Exon structure

100130374 ENSG00000235922 ribosomal protein L13 pseudogene 14
16945529782 45530365 - ENSG00000236028
Exon structure


ENSG00000236028
17045523581 45618664 + GC20P045529



17145523581 45618664 + GC20P045528



17245608121 45618664 + GC20P045617



17345608330 45618664 + GC20P045618



17445626235 45627127 + GAPDHP54
Exon structure

100421319 ENSG00000226769 glyceraldehyde 3 phosphate dehydrogenase pseudogene 54
17545523263 45817492 + EYA2
Exon structure
Hs.472877; Hs.722416; Hs.722415; Hs.722040 2139 ENSG00000064655 eyes absent homolog 2 (Drosophila)
17645700504 45700875 + ENSG00000239783
Exon structure


ENSG00000239783
17745782903 45782931 - PIR60213
Exon structure




17845789429 45790339 - RPS2P54
Exon structure

100271252 ENSG00000215450 ribosomal protein S2 pseudogene 54
17945795609 45795700 + MIR3616
Exon structure

100500814 ENSG00000264901 microRNA 3616
18045837859 45985567 - ZMYND8
Exon structure
Hs.446240; Hs.668465; Hs.658553 23613 ENSG00000101040 zinc finger, MYND-type containing 8
18145936797 45937126 - RN7SL243P
Exon structure

hugo896 ENSG00000265532 RNA, 7SL, cytoplasmic 243, pseudogene
18245943269 45943336 - ENSG00000263770
Exon structure


ENSG00000263770
18345947246 45949498 + LOC100131496
Exon structure
Hs.662547 100131496 ENSG00000267882 Uncharacterized LOC100131496 (est)
18445981305 45983377 + ENSG00000231119
Exon structure


ENSG00000231119
18546012949 46014206 + GC20P046014



18646020172 46020754 + GC20P046022



18746011781 46041434 - GC20M046013



18846020673 46041071 - ENSG00000224565
Exon structure


ENSG00000224565
18946045554 46046464 + GC20P046047



19046042638 46050895 - GC20M046044



19146106958 46107754 - RPL35AP
Exon structure

140716 ENSG00000234075 ribosomal protein L35a pseudogene
19246113021 46113125 - GC20M046116



19346113022 46113125 - RNU6-497P
Exon structure

hugo2712 ENSG00000202186 RNA, U6 small nuclear 497, pseudogene
19446121721 46121829 - GC20M046124



19546121722 46121829 - RNU6-563P
Exon structure

hugo2782 ENSG00000201742 RNA, U6 small nuclear 563, pseudogene
19646199679 46199759 + ENSG00000221294
Exon structure


ENSG00000221294
19746130601 46285621 + NCOA3
Exon structure
Hs.592142 8202 ENSG00000124151 nuclear receptor coactivator 3
19846259010 46260182 - LOC100419565
Exon structure

100419565 ENSG00000229853
19946306645 46315041 + ENSG00000255438
Exon structure


ENSG00000255438
20046285092 46415360 - SULF2
Exon structure
Hs.162016 55959 ENSG00000196562 sulfatase 2
20146420835 46421847 - GC20M046422



20246417363 46440897 + GC20P046419



20346445472 46447045 - GC20M046448



20446455713 46455788 - RNU7-173P
Exon structure

hugo3349 ENSG00000238950 RNA, U7 small nuclear 173 pseudogene
20546470885 46471713 - GC20M046472



20646488460 46489693 + SRMP1
Exon structure

170552 ENSG00000215448 spermidine synthase pseudogene 1
20746501935 46502017 + RNA5SP486
Exon structure

100873728 ENSG00000251770 RNA, 5S ribosomal pseudogene 486
20846523122 46527679 + GC20P046525



20946523132 46528819 - GC20M046526



21046533092 46533167 + RNU7-92P
Exon structure

hugo3379 ENSG00000238785 RNA, U7 small nuclear 92 pseudogene
21146533629 46563854 + GC20P046537



21246579543 46580799 + LOC100505983
Exon structure
Hs.444479 100505983 ENSG00000234967 Uncharacterized LOC100505983 (est)
21346586766 46587347 + ENSG00000228503
Exon structure


ENSG00000228503
21446584975 46589679 + GC20P046584



21546605505 46607227 - GC20M046607



21646612148 46613057 + LOC101060004
Exon structure

101060004 ENSG00000229522
21746606964 46618804 - GC20M046608



21846609232 46617488 - ENSG00000237423
Exon structure


ENSG00000237423
21946653531 46702929 + GC20P046655



22046728268 46728297 + PIR60277
Exon structure




22146749142 46750292 + GC20P046757



22246749593 46755525 - GC20M046751



22346750576 46755530 + GC20P046756