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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 20

   GeneLoc map region (42,518,783 - 46,527,459 bp) around gene/marker "CTSA"

   Explanation:
   CTSA is located at 44,518,783-44,527,459 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
142521158 42524108 + GC20P042522



242523360 42524108 + ENSG00000233277
Exon structure


ENSG00000233277
342543492 42698256 + TOX2
Exon structure
Hs.26608 84969 ENSG00000124191 TOX high mobility group box family member 2
442635888 42636178 + RN7SL443P
Exon structure

hugo1220 ENSG00000241229 RNA, 7SL, cytoplasmic 443, pseudogene
542740335 42816218 - JPH2
Exon structure
Hs.441737 57158 ENSG00000149596 junctophilin 2
642824579 42839546 - OSER1
Exon structure
Hs.75798 51526 ENSG00000132823 oxidative stress responsive serine-rich 1
742839600 42854667 + OSER1-AS1
Exon structure
Hs.159049 100505783 ENSG00000223891 OSER1 antisense RNA 1 (head to head)
842839572 42854913 + GC20P042844



942875887 42909013 + GDAP1L1
Exon structure
Hs.517059 78997 ENSG00000124194 ganglioside induced differentiation associated protein 1-like 1
1042919171 42919403 - GC20M042919



1142928328 42928360 - GC20M042928



1242931478 42939889 - FITM2
Exon structure
Hs.632269 128486 ENSG00000197296 fat storage-inducing transmembrane protein 2
1342965626 42979875 + R3HDML
Exon structure
Hs.580807 140902 ENSG00000101074 R3H domain containing-like
1442973478 42973570 + GC20P042977



1542973479 42973569 + ENSG00000201363
Exon structure


ENSG00000201363
1642976192 42983825 - ENSG00000226812
Exon structure


ENSG00000226812
1742984266 43031509 - GC20M042984



1843001386 43024346 - HNF4A-AS1
Exon structure

101927219 ENSG00000229005 HNF4A antisense RNA 1
1943018264 43020177 - ENSG00000233376
Exon structure


ENSG00000233376
2042984340 43061485 + HNF4A
Exon structure
Hs.116462 3172 ENSG00000101076 hepatocyte nuclear factor 4, alpha
2143036760 43036843 + MIR3646
Exon structure

100500813 ENSG00000266151 microRNA 3646
2243053692 43053781 - ENSG00000265893
Exon structure


ENSG00000265893
2343062837 43063236 + ENSG00000273283
Exon structure


ENSG00000273283
2443076749 43079245 - GC20M043076



2543077417 43078732 - RP5-1013A22.2
Exon structure

101927242 ENSG00000237907
2643080624 43093984 - C20orf62
Exon structure
Hs.357589 140834 ENSG00000168746 chromosome 20 open reading frame 62
2743095143 43095513 - RPL37AP1
Exon structure

140717 ENSG00000226243 ribosomal protein L37a pseudogene 1
2843095204 43095482 - GC20M043097



2943104526 43123244 + TTPAL
Exon structure
Hs.283869 79183 ENSG00000124120 tocopherol (alpha) transfer protein-like
3043114539 43114565 - PIR42438
Exon structure




3143121163 43121191 + PIR37618
Exon structure




3243120516 43123244 + GC20P043126



3343122774 43122804 + GC20P043125



3443122774 43122804 + PIR46342
Exon structure




3543126835 43126861 - PIR60204
Exon structure




3643128381 43128411 - GC20M043130



3743128381 43128411 - PIR36658
Exon structure




3843124862 43150750 - SERINC3
Exon structure
Hs.272168 10955 ENSG00000132824 serine incorporator 3
3943142534 43150695 - GC20M043142



4043160426 43252888 + PKIG
Exon structure
Hs.472831 11142 ENSG00000168734 protein kinase (cAMP-dependent, catalytic) inhibitor gamma
4143234346 43248126 - ENSG00000269605
Exon structure


ENSG00000269605
4243249607 43249635 + PIR61280
Exon structure




4343255321 43255349 + PIR48727
Exon structure




4443248163 43280874 - ADA
Exon structure
Hs.654536 100 ENSG00000196839 adenosine deaminase
4543285958 43286806 + GC20P043285



4643286911 43287217 + GC20P043286



4743298941 43298971 - GC20M043298



4843285092 43324737 - LINC01260
Exon structure
Hs.731918 79015 ENSG00000132832 long intergenic non-protein coding RNA 1260
4943305020 43305050 - GC20M043305



5043343563 43350152 + GC20P043344



5143323533 43374662 - ENSG00000244558
Exon structure


ENSG00000244558
5243343485 43357150 + WISP2
Exon structure
Hs.592145 8839 ENSG00000064205 WNT1 inducible signaling pathway protein 2
5343352298 43357150 + GC20P043352



5443375283 43375842 + GC20P043376



5543374421 43380954 + KCNK15
Exon structure
Hs.528664 60598 ENSG00000124249 potassium channel, subfamily K, member 15
5643381650 43381676 - PIR49731
Exon structure




5743380451 43383718 + GC20P043381



5843380445 43438979 - RIMS4
Exon structure
Hs.517065 140730 ENSG00000101098 regulating synaptic membrane exocytosis 4
5943470566 43471189 - PGBD4P2
Exon structure

100421228
piggyBac transposable element derived 4 pseudogene 2
6043504107 43504138 - GC20M043504



6143509478 43509775 - GC20M043517



6243509479 43509775 - RN7SL31P
Exon structure

hugo1086 ENSG00000263911 RNA, 7SL, cytoplasmic 31, pseudogene
6343514317 43537173 + YWHAB
Exon structure
Hs.643544 7529 ENSG00000166913 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
6443514344 43537160 + GC20P043516



6543538703 43587676 + PABPC1L
Exon structure
Hs.641481 80336 ENSG00000101104 poly(A) binding protein, cytoplasmic 1-like
6643561684 43567958 + GC20P043562



6743570771 43589127 - TOMM34
Exon structure
Hs.517066 10953 ENSG00000025772 translocase of outer mitochondrial membrane 34
6843592435 43595099 - STK4-AS1
Exon structure
Hs.196065 100505826 ENSG00000227477 STK4 antisense RNA 1 (head to head)
6943595156 43604329 + GC20P043596



7043610522 43623802 + GC20P043614



7143632989 43633095 + ENSG00000252021
Exon structure


ENSG00000252021
7243595115 43708600 + STK4
Exon structure
Hs.472838 6789 ENSG00000101109 serine/threonine kinase 4
7343704444 43704472 + PIR48188
Exon structure




7443704948 43704977 + PIR51876
Exon structure




7543723714 43723828 - GC20M043727



7643720950 43729753 - KCNS1
Exon structure
Hs.117780 3787 ENSG00000124134 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
7743738093 43743813 - WFDC5
Exon structure
Hs.375031 149708 ENSG00000175121 WAP four-disulfide core domain 5
7843752066 43753106 - WFDC12
Exon structure
Hs.352180 128488 ENSG00000168703 WAP four-disulfide core domain 12
7943766347 43767617 - GC20M043770



8043803517 43805185 + PI3
Exon structure
Hs.112341 5266 ENSG00000124102 peptidase inhibitor 3, skin-derived
8143808589 43821571 + GC20P043815



8243835673 43836890 + GC20P043846



8343835675 43836916 + GC20P043847



8443835638 43838414 + SEMG1
Exon structure
Hs.1968 6406 ENSG00000124233 semenogelin I
8543849941 43853099 + SEMG2
Exon structure
Hs.537218 6407 ENSG00000124157 semenogelin II
8643858458 43858832 + ENSG00000233352
Exon structure


ENSG00000233352
8743859509 43861972 + ENSG00000243995
Exon structure


ENSG00000243995
8843859369 43875632 + GC20P043860



8943880879 43883206 - SLPI
Exon structure
Hs.517070 6590 ENSG00000124107 secretory leukocyte peptidase inhibitor
9043922085 43937169 - MATN4
Exon structure
Hs.278489 8785 ENSG00000124159 matrilin 4
9143935491 43946464 + RBPJL
Exon structure
Hs.248217 11317 ENSG00000124232 recombination signal binding protein for immunoglobulin kappa J region-like
9243946212 43946239 + PIR62059
Exon structure




9343951001 43951073 + TRNAV33P
Exon structure

100189477
transfer RNA valine 33 (anticodon CAC) pseudogene
9443953928 43977064 - SDC4
Exon structure
Hs.632267 6385 ENSG00000124145 syndecan 4
9543990577 44005442 + SYS1
Exon structure
Hs.655055 90196 ENSG00000204070 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
9643991809 44039250 + SYS1-DBNDD2
Exon structure

767557 ENSG00000254806 SYS1-DBNDD2 readthrough (NMD candidate)
9744016987 44017345 - ENSG00000232880
Exon structure


ENSG00000232880
9844002520 44036529 - TP53TG5
Exon structure
Hs.710271 27296 ENSG00000124251 TP53 target 5
9944034633 44039250 + DBNDD2
Exon structure
Hs.730643 55861 ENSG00000244274 dysbindin (dystrobrevin binding protein 1) domain containing 2
10044044707 44054884 + PIGT
Exon structure
Hs.437388 51604 ENSG00000124155 phosphatidylinositol glycan anchor biosynthesis, class T
10144058264 44077210 + GC20P044058



10244074071 44077220 + LOC100130157
Exon structure
Hs.729907 100130157 ENSG00000269549 Uncharacterized LOC100130157 (est)
10344076042 44076982 + LOC101927326
Exon structure

101927326 ENSG00000234011
10444080765 44085455 + GC20P044086



10544095910 44107452 - ENSG00000268111
Exon structure


ENSG00000268111
10644098346 44110172 + WFDC2
Exon structure
Hs.2719 10406 ENSG00000101443 WAP four-disulfide core domain 2
10744116295 44116321 - PIR40923
Exon structure




10844116253 44118888 + ENSG00000237464
Exon structure


ENSG00000237464
10944119458 44120311 - RPL5P2
Exon structure

140749 ENSG00000237068 ribosomal protein L5 pseudogene 2
11044141101 44144264 - SPINT3
Exon structure
Hs.370724 10816 ENSG00000101446 serine peptidase inhibitor, Kunitz type, 3
11144162835 44168134 - WFDC6
Exon structure
Hs.673237 140870 ENSG00000243543 WAP four-disulfide core domain 6
11244165435 44165653 - ENSG00000232135
Exon structure


ENSG00000232135
11344168614 44168925 - HSPD1P21
Exon structure

100462990 ENSG00000229900 heat shock 60kDa protein 1 (chaperonin) pseudogene 21
11444164919 44176065 - EPPIN-WFDC6
Exon structure

100526773 ENSG00000249139 EPPIN-WFDC6 readthrough
11544165625 44176391 - EPPIN
Exon structure
Hs.121084 57119 ENSG00000101448 epididymal peptidase inhibitor
11644170484 44176040 - GC20M044187



11744188396 44188515 - GC20M044193



11844188397 44188515 - RNA5SP485
Exon structure

100873727 ENSG00000201923 RNA, 5S ribosomal pseudogene 485
11944179791 44207965 - WFDC8
Exon structure
Hs.116128 90199 ENSG00000158901 WAP four-disulfide core domain 8
12044196629 44197446 - CCNB1IP1P2
Exon structure

100505892 ENSG00000230860 cyclin B1 interacting protein 1 pseudogene 2
12144216630 44218039 - GC20M044219



12244236578 44259907 - WFDC9
Exon structure
Hs.249828 259240 ENSG00000180205 WAP four-disulfide core domain 9
12344258165 44259835 + WFDC10A
Exon structure
Hs.199380 140832 ENSG00000180305 WAP four-disulfide core domain 10A
12444269090 44270032 - RPS2P7
Exon structure

86781 ENSG00000235508 ribosomal protein S2 pseudogene 7
12544274937 44274968 - GC20M044274



12644275348 44275380 + GC20P044275



12744277202 44298909 - WFDC11
Exon structure
Hs.374924 259239 ENSG00000180083 WAP four-disulfide core domain 11
12844313290 44333658 - WFDC10B
Exon structure
Hs.237392 280664 ENSG00000182931 WAP four-disulfide core domain 10B
12944333741 44333819 - MIR3617
Exon structure

100500897 ENSG00000266071 microRNA 3617
13044330655 44337456 + WFDC13
Exon structure
Hs.406733 164237 ENSG00000168634 WAP four-disulfide core domain 13
13144350988 44354469 + SPINT4
Exon structure
Hs.677891 391253 ENSG00000149651 serine peptidase inhibitor, Kunitz type 4
13244374198 44374926 - HNRNPA1P3
Exon structure

170524 ENSG00000226188 heterogeneous nuclear ribonucleoprotein A1 pseudogene 3
13344378559 44378713 + SPINT5P
Exon structure

140863 ENSG00000168630 serine peptidase inhibitor, Kunitz type 5, pseudogene
13444376583 44420571 - WFDC3
Exon structure
Hs.419126 140686 ENSG00000124116 WAP four-disulfide core domain 3
13544407336 44407462 + GC20P044413



13644407337 44407462 + RNU6ATAC38P
Exon structure

hugo3380 ENSG00000221046 RNA, U6atac small nuclear 38, pseudogene
13744413154 44413185 - GC20M044413



13844420576 44440066 + DNTTIP1
Exon structure
Hs.472852 116092 ENSG00000101457 deoxynucleotidyltransferase, terminal, interacting protein 1
13944431636 44434005 + GC20P044431



14044441215 44445596 + UBE2C
Exon structure
Hs.93002 11065 ENSG00000175063 ubiquitin-conjugating enzyme E2C
14144451853 44462384 - TNNC2
Exon structure
Hs.182421 7125 ENSG00000101470 troponin C type 2 (fast)
14244462449 44471914 + SNX21
Exon structure
Hs.472854 90203 ENSG00000124104 sorting nexin family member 21
14344470477 44470503 + PIR61038
Exon structure




14444470360 44486048 - ACOT8
Exon structure
Hs.444776 10005 ENSG00000101473 acyl-CoA thioesterase 8
14544470662 44486010 - GC20M044471



14644486220 44507770 + ZSWIM3
Exon structure
Hs.292135 140831 ENSG00000132801 zinc finger, SWIM-type containing 3
14744509848 44513905 + ZSWIM1
Exon structure
Hs.517075 90204 ENSG00000168612 zinc finger, SWIM-type containing 1
14844515128 44516274 - SPATA25
Exon structure
Hs.128235 128497 ENSG00000149634 spermatogenesis associated 25
14944517264 44519926 - NEURL2
Exon structure

140825 ENSG00000124257 neuralized E3 ubiquitin protein ligase 2
15044521333 44522058 - ENSG00000271984
Exon structure


ENSG00000271984
15144521600 44523319 + GC20P044522



15244518783 44527459 + CTSA
Exon structure
Hs.609336 5476 ENSG00000064601 cathepsin A
15344526420 44527459 + GC20P044527



15444527259 44541003 - PLTP
Exon structure
Hs.439312 5360 ENSG00000100979 phospholipid transfer protein
15544543294 44544555 - GC20M044546



15644557746 44560154 + GC20P044557



15744563267 44576662 + PCIF1
Exon structure
Hs.472856 63935 ENSG00000100982 PDX1 C-terminal inhibiting factor 1
15844577292 44600833 - ZNF335
Exon structure
Hs.174193 63925 ENSG00000198026 zinc finger protein 335
15944603756 44604907 - FTLP1
Exon structure

170514 ENSG00000235525 ferritin, light polypeptide pseudogene 1
16044604856 44604886 - GC20M044613



16144637547 44645200 + MMP9
Exon structure
Hs.297413 4318 ENSG00000100985 matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
16244644111 44644231 + ENSG00000203346
Exon structure


ENSG00000203346
16344642139 44650712 - LOC100128028
Exon structure
Hs.675276 100128028 ENSG00000204044 Uncharacterized LOC100128028 (est)
16444650415 44656438 + GC20P044652



16544656393 44656420 + PIR40089
Exon structure




16644650329 44688789 + SLC12A5
Exon structure
Hs.21413 57468 ENSG00000124140 solute carrier family 12 (potassium/chloride transporter), member 5
16744690764 44690792 - PIR58425
Exon structure




16844689624 44718591 - NCOA5
Exon structure
Hs.654991 57727 ENSG00000124160 nuclear receptor coactivator 5
16944721054 44721086 - GC20M044721



17044721561 44721590 + PIR33346
Exon structure




17144722079 44722106 + PIR59850
Exon structure




17244728114 44728832 + RPL13P2
Exon structure

128500 ENSG00000213820 ribosomal protein L13 pseudogene 2
17344746906 44758502 + CD40
Exon structure
Hs.472860 958 ENSG00000101017 CD40 molecule, TNF receptor superfamily member 5
17444797043 44799876 - ENSG00000229957
Exon structure


ENSG00000229957
17544828955 44835850 + GC20P044828



17644802372 44937137 - CDH22
Exon structure
Hs.472861 64405 ENSG00000149654 cadherin 22, type 2
17744946468 44946657 + GC20P044949



17844963603 44968432 - GC20M044966



17944978167 44981836 - GC20M044979



18044978167 44993064 - SLC35C2
Exon structure
Hs.593344 51006 ENSG00000080189 solute carrier family 35 (GDP-fucose transporter), member C2
18144987233 44987262 - PIR48117
Exon structure




18244987066 44993000 - GC20M044988



18345008558 45014804 - GC20M045008



18445015985 45017736 - GC20M045018



18544994688 45061704 - ELMO2
Exon structure
Hs.210469 63916 ENSG00000062598 engulfment and cell motility 2
18645042867 45087915 - ZNF663P
Exon structure
Hs.712133 100130934 ENSG00000215452 zinc finger protein 663, pseudogene
18745061328 45074795 + GC20P045061



18845075059 45082241 + GC20P045075



18945092299 45093931 - MKRN7P
Exon structure
Hs.717103 7686 ENSG00000225849 makorin ring finger protein 7, pseudogene
19045100739 45101016 - GC20M045102



19145113100 45121279 + ZNF840
Exon structure

100130863 ENSG00000184617 zinc finger protein 840
19245119579 45120931 + LOC100533646
Exon structure

100533646

19345127530 45127649 + GC20P045127



19445129701 45142198 - ZNF334
Exon structure
Hs.147041 55713 ENSG00000198185 zinc finger protein 334
19545169585 45179213 - OCSTAMP
Exon structure
Hs.526636 128506 ENSG00000149635 osteoclast stimulatory transmembrane protein
19645204733 45205779 + GC20P045204



19745205553 45206592 - GC20M045205



19845211550 45216730 - GC20M045211



19945186462 45313124 - SLC13A3
Exon structure
Hs.655498 64849 ENSG00000158296 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
20045313004 45318418 - TP53RK
Exon structure
Hs.440263 112858 ENSG00000172315 TP53 regulating kinase
20145318298 45318928 + ENSG00000271784
Exon structure


ENSG00000271784
20245338338 45339075 + GC20P045339



20345338126 45364986 + SLC2A10
Exon structure
Hs.305971 81031 ENSG00000197496 solute carrier family 2 (facilitated glucose transporter), member 10
20445354924 45362728 + GC20P045358



20545354926 45362728 + GC20P045359



20645417271 45418167 + GC20P045417



20745439477 45439561 - ENSG00000266136
Exon structure


ENSG00000266136
20845487972 45488311 + RN7SKP33
Exon structure

hugo780 ENSG00000222874 RNA, 7SK small nuclear pseudogene 33
20945492184 45492743 - RPL13P14
Exon structure

100130374 ENSG00000235922 ribosomal protein L13 pseudogene 14
21045529782 45530365 - LOC101927355
Exon structure

101927355 ENSG00000236028
21145523581 45618664 + GC20P045531



21245523581 45618709 + GC20P045530



21345608121 45618664 + GC20P045619



21445608330 45618664 + GC20P045620



21545626235 45627127 + GAPDHP54
Exon structure

100421319 ENSG00000226769 glyceraldehyde 3 phosphate dehydrogenase pseudogene 54
21645523263 45817492 + EYA2
Exon structure
Hs.472877; Hs.722040 2139 ENSG00000064655 eyes absent homolog 2 (Drosophila)
21745700504 45700875 + ENSG00000239783
Exon structure


ENSG00000239783
21845717878 45724719 + GC20P045717



21945782903 45782931 - PIR60213
Exon structure




22045789429 45790339 - RPS2P54
Exon structure

100271252 ENSG00000215450 ribosomal protein S2 pseudogene 54
22145795609 45795700 + MIR3616
Exon structure

100500814 ENSG00000264901 microRNA 3616
22245837859 45985567 - ZMYND8
Exon structure
Hs.446240; Hs.658553 23613 ENSG00000101040 zinc finger, MYND-type containing 8
22345919358 45920745 + GC20P045920



22445936797 45937126 - RN7SL243P
Exon structure

hugo1004 ENSG00000265532 RNA, 7SL, cytoplasmic 243, pseudogene
22545943269 45943336 - ENSG00000263770
Exon structure


ENSG00000263770
22645947246 45949498 + LOC100131496
Exon structure
Hs.662547 100131496 ENSG00000267882 Uncharacterized LOC100131496 (est)
22745976881 45977886 - ENSG00000273451
Exon structure


ENSG00000273451
22845981305 45983377 + LOC101927377
Exon structure

101927377 ENSG00000231119
22946011782 46041434 - GC20M046015



23046020673 46041071 - ENSG00000224565
Exon structure


ENSG00000224565
23146044894 46045122 - GC20M046045



23246048503 46048865 - GC20M046048



23346048866 46049161 - GC20M046049



23446079915 46080852 + GC20P046079



23546101218 46102101 + GC20P046101



23646103286 46103501 + GC20P046103



23746103665 46103877 + GC20P046104



23846106958 46107754 - RPL35AP
Exon structure

140716 ENSG00000234075 ribosomal protein L35a pseudogene
23946113021 46113125 - GC20M046117



24046113022 46113125 - ENSG00000202186
Exon structure


ENSG00000202186
24146119432 46119875 - GC20M046119



24246121721 46121829 - GC20M046125



24346121722 46121829 - ENSG00000201742
Exon structure


ENSG00000201742
24446121915 46122806 - GC20M046126



24546124031 46124576 + GC20P046124



24646126336 46126611 + GC20P046128



24746127172 46128509 + GC20P046129



24846154796 46154825 - GC20M046156



24946154950 46154980 - GC20M046154



25046155024 46155055 - GC20M046155



25146199679 46199759 + ENSG00000221294
Exon structure


ENSG00000221294
25246130601 46285621 + NCOA3
Exon structure
Hs.592142 8202 ENSG00000124151 nuclear receptor coactivator 3
25346251678 46251708 + GC20P046251



25446251702 46252817 + GC20P046252



25546259010 46260182 - LOC100419565
Exon structure

100419565 ENSG00000229853
25646285092 46288474 - GC20M046286



25746300939 46305436 - GC20M046300



25846306645 46315041 + ENSG00000255438
Exon structure


ENSG00000255438
25946285092 46415360 - SULF2
Exon structure
Hs.162016 55959 ENSG00000196562 sulfatase 2
26046414403 46415712 + GC20P046414



26146421038 46428575 + GC20P046424



26246431523 46440897 + GC20P046432



26346455713 46455788 - RNU7-173P
Exon structure

hugo3456 ENSG00000238950 RNA, U7 small nuclear 173 pseudogene
26446460562 46463700 + GC20P046460



26546463488 46463518 - GC20M046463



26646470886 46471713 - GC20M046473



26746488460 46489693 + SRMP1
Exon structure

170552 ENSG00000215448 spermidine synthase pseudogene 1
26846501935 46502017 + RNA5SP486
Exon structure

100873728 ENSG00000251770 RNA, 5S ribosomal pseudogene 486
26946523314 46523344 + GC20P046526



27046523123 46527679 + GC20P046527



27146523066 46528819 - GC20M046527