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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 20

   GeneLoc map region (21,608,534 - 25,619,110 bp) around gene/marker "CST3"

   Explanation:
   CST3 is located at 23,608,534-23,619,110 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
121632328 21637680 + GC20P021632



221591425 21684223 - GC20M021595



321688908 21689915 + GC20P021688



421686297 21696620 + PAX1
Exon structure
Hs.122310 5075 ENSG00000125813 paired box 1
521692217 21692235 - GC20M021692



621722941 21723715 - SLC25A6P1
Exon structure

128790 ENSG00000233015 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6, pseudogene 1
721735866 21736290 + RPL41P1
Exon structure

22971 ENSG00000227063 ribosomal protein L41 pseudogene 1
821882690 21882718 - PIR46818
Exon structure




921928285 21951421 + ENSG00000238034
Exon structure


ENSG00000238034
1022034728 22055292 + RP11-125P18.1
Exon structure
Hs.385748 100270679 ENSG00000234435 Uncharacterized LOC100270679 (est)
1122201192 22203921 + ENSG00000234862
Exon structure


ENSG00000234862
1222243347 22263310 - GC20M022243



1322252690 22254092 - ENSG00000225170
Exon structure


ENSG00000225170
1422260866 22263310 - RP5-828K20.2
Exon structure

101929663 ENSG00000225321
1522324331 22324568 - ENSG00000270838
Exon structure


ENSG00000270838
1622370851 22371509 + GC20P022379



1722374985 22375103 + GC20P022378



1822384637 22384836 + GC20P022387



1922380971 22401281 - RP5-1004I9.1
Exon structure
Hs.651993 284788 ENSG00000204684 Uncharacterized LOC284788 (est)
2022437265 22444215 + GC20P022437



2122433900 22447980 - GC20M022436



2222449343 22452197 - GC20M022452



2322490753 22504856 - GC20M022494



2422505840 22505970 + GC20P022508



2522528309 22559280 - LINC00261
Exon structure
Hs.9842 140828 ENSG00000259974 long intergenic non-protein coding RNA 261
2622561642 22566101 - FOXA2
Exon structure
Hs.155651 3170 ENSG00000125798 forkhead box A2
2722568160 22588155 - RP4-788L20.3
Exon structure

101929685 ENSG00000237396
2822567875 22588609 - GC20M022571



2922585356 22599674 + GC20P022588



3022656710 22665982 - ENSG00000230400
Exon structure


ENSG00000230400
3122665290 22709111 + GC20P022665



3222713848 22713939 - ENSG00000265151
Exon structure


ENSG00000265151
3322713371 22714774 - KRT18P3
Exon structure

170527 ENSG00000215553 keratin 18 pseudogene 3
3422709610 22727263 + GC20P022709



3522753435 22754566 + GC20P022756



3622758501 22758627 - GC20M022763



3722786445 22791924 + GC20P022786



3822866128 22866706 - CYB5AP4
Exon structure

1532 ENSG00000213882 cytochrome b5 type A (microsomal) pseudogene 4
3922897186 22954987 + GC20P022900



4022941171 22946700 - LOC100419956
Exon structure

100419956 ENSG00000228935
4122977630 23011443 - GC20M022977



4222990846 23011422 - RP4-753D10.5
Exon structure

101929707 ENSG00000230492
4323012179 23019873 + ENSG00000234646
Exon structure


ENSG00000234646
4423016057 23017314 + SSTR4
Exon structure
Hs.673846 6754 ENSG00000132671 somatostatin receptor 4
4523026270 23030378 - THBD
Exon structure
Hs.2030 7056 ENSG00000178726 thrombomodulin
4623027732 23029184 + GC20P023031



4723030380 23035547 + GC20P023032



4823046042 23052105 - GC20M023050



4923052184 23053359 - GC20M023064



5023052184 23053787 + GC20P023052



5123061083 23061278 - ENSG00000256492
Exon structure


ENSG00000256492
5223059986 23066977 - CD93
Exon structure
Hs.97199 22918 ENSG00000125810 CD93 molecule
5323105705 23113273 - LINC00656
Exon structure
Hs.352228 200261 ENSG00000233746 long intergenic non-protein coding RNA 656
5423128723 23130576 + GC20P023132



5523141494 23141608 - RNA5SP478
Exon structure

100873720 ENSG00000201527 RNA, 5S ribosomal pseudogene 478
5623160769 23170942 + GC20P023162



5723168344 23169661 - GC20M023171



5823168612 23170944 + LOC100505664
Exon structure
Hs.120058 100505664 ENSG00000230387 Uncharacterized LOC100505664 (est)
5923301591 23305689 - GC20M023308



6023327578 23332123 - ENSG00000234832
Exon structure


ENSG00000234832
6123330486 23330513 + PIR48192
Exon structure




6223330015 23334066 - ENSG00000269407
Exon structure


ENSG00000269407
6323331373 23335414 + NXT1
Exon structure
Hs.516933 29107 ENSG00000132661 NTF2-like export factor 1
6423337231 23338753 - RP3-322G13.5
Exon structure
Hs.140295 100505683 ENSG00000232645 Uncharacterized LOC100505683 (est)
6523342787 23353700 + GZF1
Exon structure
Hs.709462 64412 ENSG00000125812 GDNF-inducible zinc finger protein 1
6623361532 23361649 - GC20M023366



6723361533 23361649 - RNA5SP479
Exon structure

100873721 ENSG00000201728 RNA, 5S ribosomal pseudogene 479
6823355156 23402156 - NAPB
Exon structure
Hs.269471 63908 ENSG00000125814 N-ethylmaleimide-sensitive factor attachment protein, beta
6923420322 23425567 + CSTL1
Exon structure
Hs.352134 128817 ENSG00000125823 cystatin-like 1
7023421033 23425499 + GC20P023427



7123431040 23433494 - CST11
Exon structure
Hs.128100 140880 ENSG00000125831 cystatin 11
7223438222 23438322 - GC20M023440



7323438221 23438322 - ENSG00000200208
Exon structure


ENSG00000200208
7423447787 23447813 + PIR59345
Exon structure




7523456337 23460435 + CST12P
Exon structure

hugo88 ENSG00000226344 cystatin 12, pseudogene
7623471738 23476655 + CST8
Exon structure
Hs.121602 10047 ENSG00000125815 cystatin 8 (cystatin-related epididymal specific)
7723477636 23477668 + GC20P023477



7823484305 23487749 + GC20P023489



7923494953 23494983 - GC20M023494



8023495374 23499667 - GC20M023496



8123497521 23498706 - ENSG00000260202
Exon structure


ENSG00000260202
8223498155 23498183 + PIR54361
Exon structure




8323499783 23522655 + CST13P
Exon structure
Hs.400007 164380 ENSG00000204663 cystatin 13, pseudogene
8423528401 23531289 - CST9LP1
Exon structure

128820 ENSG00000204662 cystatin 9-like pseudogene 1
8523545369 23549386 - CST9L
Exon structure
Hs.121554 128821 ENSG00000101435 cystatin 9-like
8623564282 23567147 + ENSG00000204658
Exon structure


ENSG00000204658
8723583047 23586610 - CST9
Exon structure
Hs.698020 128822 ENSG00000173335 cystatin 9 (testatin)
8823612463 23612953 - ENSG00000270001
Exon structure


ENSG00000270001
8923608534 23619110 - CST3
Exon structure
Hs.304682 1471 ENSG00000101439 cystatin C
9023635862 23637027 - ENSG00000225056
Exon structure


ENSG00000225056
9123666277 23669677 - CST4
Exon structure
Hs.654549 1472 ENSG00000101441 cystatin S
9223691957 23692043 - CST2P1
Exon structure

101410546 ENSG00000232595 cystatin SA pseudogene 1
9323728601 23728627 + PIR41587
Exon structure




9423728190 23731905 - CST1
Exon structure
Hs.123114 1469 ENSG00000170373 cystatin SN
9523753496 23756806 - CSTP2
Exon structure

1481
cystatin pseudogene 2
9623755545 23755574 - PIR40448
Exon structure




9723778778 23786300 + ENSG00000230908
Exon structure


ENSG00000230908
9823804404 23807368 - CST2
Exon structure
Hs.669305 1470 ENSG00000170369 cystatin SA
9923841968 23841998 - GC20M023841



10023853000 23855563 + GC20P023853



10123856572 23860387 - CST5
Exon structure
Hs.121489 1473 ENSG00000170367 cystatin D
10223899408 23902806 - CSTP1
Exon structure

1480 ENSG00000228476 cystatin pseudogene 1
10323899408 23909558 - GC20M023899



10423961222 23961371 - ENSG00000236168
Exon structure


ENSG00000236168
10523965690 23969416 - GGTLC1
Exon structure
Hs.355394 92086 ENSG00000149435 gamma-glutamyltransferase light chain 1
10623969635 23969666 + GC20P023972



10723969722 23969753 + PIR56142
Exon structure




10823970118 23970149 + GC20P023974



10923970260 23970288 + PIR37244
Exon structure




11023970319 23970348 + GC20P023976



11123969929 23971091 + POM121L3P
Exon structure

651452 ENSG00000167390 POM121 transmembrane nucleoporin-like 3, pseudogene
11223970540 23970571 - GC20M023970



11323970597 23970632 + PIR34408
Exon structure




11423970740 23970770 - GC20M023971



11523971554 23971585 + GC20P023975



11623979070 23980270 - GC20M023982



11723982712 23983891 - GC20M023983



11824003973 24011949 + GC20P024006



11924033747 24033773 + PIR52234
Exon structure




12024045119 24047430 + GC20P024045



12124071567 24092596 - GC20M024075



12224123226 24125022 - ENSG00000236151
Exon structure


ENSG00000236151
12324160867 24164530 - GC20M024163



12424164440 24164640 + GC20P024169



12524180403 24205224 + FLJ33581
Exon structure
Hs.651965 400839 ENSG00000230133 Uncharacterized LOC400839 (est)
12624217890 24218034 + GC20P024221



12724217891 24218034 + RNU1-23P
Exon structure

hugo1825 ENSG00000200231 RNA, U1 small nuclear 23, pseudogene
12824278221 24298722 - ENSG00000232200
Exon structure


ENSG00000232200
12924395948 24395980 - GC20M024395



13024426027 24426950 + GAPDHP53
Exon structure

100421318 ENSG00000234069 glyceraldehyde 3 phosphate dehydrogenase pseudogene 53
13124466726 24468664 + GC20P024466



13224472108 24482981 - ENSG00000228539
Exon structure


ENSG00000228539
13324449835 24647252 + SYNDIG1
Exon structure
Hs.124638 79953 ENSG00000101463 synapse differentiation inducing 1
13424565538 24577789 + GC20P024565



13524606212 24606242 - GC20M024606



13624606254 24606297 - GC20M024610



13724606963 24606992 - GC20M024611



13824607193 24607225 - GC20M024609



13924607231 24607262 - GC20M024607



14024607273 24607301 - GC20M024608



14124660183 24661627 + ENSG00000231015
Exon structure


ENSG00000231015
14224860690 24861148 - GC20M024863



14324901741 24901770 + PIR56829
Exon structure




14424911272 24913594 + GC20P024915



14524911284 24913619 - GC20M024915



14624929866 24940564 + CST7
Exon structure
Hs.143212 8530 ENSG00000077984 cystatin F (leukocystatin)
14724944400 24944428 - PIR45392
Exon structure




14824954806 24954916 + GC20P024958



14924954807 24954916 + ENSG00000207355
Exon structure


ENSG00000207355
15024943561 24973615 - APMAP
Exon structure
Hs.472330 57136 ENSG00000101474 adipocyte plasma membrane associated protein
15124986868 25039616 - ACSS1
Exon structure
Hs.529353 84532 ENSG00000154930 acyl-CoA synthetase short-chain family member 1
15225020418 25020447 + PIR53263
Exon structure




15325021538 25023358 - GC20M025024



15425043609 25047179 - GC20M025043



15525051521 25062996 - VSX1
Exon structure
Hs.274264 30813 ENSG00000100987 visual system homeobox 1
15625079741 25080564 + LOC391239
Exon structure

391239 ENSG00000225069
15725121425 25129894 - RP4-738P15.1
Exon structure
Hs.334934 284798 ENSG00000230725 Uncharacterized LOC284798 (est)
15825141726 25142697 - LOC100128078
Exon structure

100128078 ENSG00000225344
15925165310 25177508 - GC20M025168



16025176329 25207365 + ENTPD6
Exon structure
Hs.500375 955 ENSG00000197586 ectonucleoside triphosphate diphosphohydrolase 6 (putative)
16125195334 25195434 + ENSG00000202414
Exon structure


ENSG00000202414
16225202428 25207365 + GC20P025202



16325206975 25207001 + PIR39254
Exon structure




16425207122 25207370 - ENSG00000268302
Exon structure


ENSG00000268302
16525212180 25212212 - GC20M025212



16625215208 25215238 - GC20M025215



16725222085 25222115 + GC20P025222



16825225790 25227480 - GC20M025228



16925239915 25239941 + PIR44667
Exon structure




17025228705 25278650 + PYGB
Exon structure
Hs.368157 5834 ENSG00000100994 phosphorylase, glycogen; brain
17125268551 25269403 - GC20M025268



17225271225 25271252 + PIR48093
Exon structure




17325277078 25277105 + PIR34275
Exon structure




17425277313 25277339 + PIR57709
Exon structure




17525277959 25278247 + GC20P025283



17625287469 25291108 - GC20M025287



17725293281 25293312 + GC20P025294



17825293936 25293979 + GC20P025295



17925293991 25294021 + GC20P025293



18025275379 25371619 - ABHD12
Exon structure
Hs.441550 26090 ENSG00000100997 abhydrolase domain containing 12
18125329004 25329023 + GC20P025333



18225348708 25349444 - PPIAP2
Exon structure

170537 ENSG00000227379 peptidylprolyl isomerase A (cyclophilin A) pseudogene 2
18325348911 25349402 - GC20M025348



18425377958 25377986 + PIR58540
Exon structure




18525388397 25388424 + PIR61298
Exon structure




18625394093 25397882 + GC20P025394



18725388323 25433264 + GINS1
Exon structure
Hs.658464 9837 ENSG00000101003 GINS complex subunit 1 (Psf1 homolog)
18825411605 25411633 + PIR61820
Exon structure




18925427189 25427216 + PIR43762
Exon structure




19025423660 25433264 + GC20P025423



19125469619 25477439 - GC20M025469



19225433337 25566153 - NINL
Exon structure
Hs.631508 22981 ENSG00000101004 ninein-like
19325513663 25514148 + GC20P025516



19425528194 25528221 - PIR48473
Exon structure




19525530934 25530961 - PIR43236
Exon structure




19625536191 25536219 - PIR44041
Exon structure




19725542135 25542166 + GC20P025542



19825542232 25542262 - GC20M025544



19925543148 25543191 + GC20P025544



20025543203 25543233 + GC20P025543



20125565368 25565394 - PIR54986
Exon structure




20225591789 25591859 + RNU6ATAC17P
Exon structure

hugo3359 ENSG00000251883 RNA, U6atac small nuclear 17, pseudogene
20325593571 25604811 - NANP
Exon structure
Hs.143137 140838 ENSG00000170191 N-acetylneuraminic acid phosphatase
20425604681 25658710 + ENSG00000213742
Exon structure


ENSG00000213742