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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 20

   GeneLoc map region (0 - 2,776,015 bp) around gene/marker "SLC52A3"

   Explanation:
   SLC52A3 is located at 760,080-776,015 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
187250 97094 + DEFB125
Exon structure
Hs.380220 245938 ENSG00000178591 defensin, beta 125
2142369 145751 + DEFB126
Exon structure
Hs.124211 81623 ENSG00000125788 defensin, beta 126
3157470 159163 + DEFB127
Exon structure
Hs.99362 140850 ENSG00000088782 defensin, beta 127
4173229 173296 - ENSG00000274590
Exon structure


ENSG00000274590
5187853 189681 - DEFB128
Exon structure
Hs.516818 245939 ENSG00000185982 defensin, beta 128
6183155 202938 + GC20P000183



7199692 199719 - PIR57210
Exon structure




8227258 229886 + DEFB129
Exon structure
Hs.112087 140881 ENSG00000125903 defensin, beta 129
9257736 261096 + DEFB132
Exon structure
Hs.516819 400830 ENSG00000186458 defensin, beta 132
10265909 269024 + GC20P000265



11267186 268857 + ENSG00000272874
Exon structure


ENSG00000272874
12270863 290778 - C20orf96
Exon structure
Hs.348112 140680 ENSG00000196476 chromosome 20 open reading frame 96
13296968 300321 + ZCCHC3
Exon structure
Hs.28608 85364 ENSG00000247315 zinc finger, CCHC domain containing 3
14325401 330228 + SOX12
Exon structure
Hs.43627; Hs.745045 6666 ENSG00000177732 SRY (sex determining region Y)-box 12
15330772 331864 - GC20M000330



16319687 348224 - NRSN2-AS1
Exon structure
Hs.659689 100507459 ENSG00000225377 NRSN2 antisense RNA 1
17344133 346725 - GC20M000344



18346266 347981 - LOC101929937
Exon structure

101929937

19346726 359660 + NRSN2
Exon structure
Hs.416024 80023 ENSG00000125841 neurensin 2
20354652 355048 + GC20P000354



21362835 397559 + TRIB3
Exon structure
Hs.516826 57761 ENSG00000101255 tribbles pseudokinase 3
22381305 381339 + GC20P000390



23381305 381339 + GC20P000385



24381342 381391 + GC20P000382



25381342 381391 + GC20P000391



26381294 381500 + GC20P000386



27381294 381500 + GC20P000389



28381342 381489 + GC20P000387



29381342 381489 + GC20P000384



30407498 430966 + RBCK1
Exon structure
Hs.247280 10616 ENSG00000125826 RanBP-type and C3HC4-type zinc finger containing 1
31435204 437606 + GC20P000435



32435208 437608 + GC20P000436



33436702 436728 - PIR61983
Exon structure




34436746 436777 - PIR49225
Exon structure




35436746 436777 - GC20M000436



36438190 438216 - PIR47627
Exon structure




37435477 462553 - TBC1D20
Exon structure
Hs.590876 128637 ENSG00000125875 TBC1 domain family, member 20
38450662 450760 + GC20P000451



39450663 450762 + ENSG00000206797
Exon structure


ENSG00000206797
40452416 452445 - PIR53425
Exon structure




41462908 463270 + GC20P000462



42487478 487508 - GC20M000488



43487478 487508 - GC20M000487



44472969 543838 - CSNK2A1
Exon structure
Hs.644056 1457 ENSG00000101266 casein kinase 2, alpha 1 polypeptide
45591363 591569 - GC20M000594



46603797 610398 - TCF15
Exon structure
Hs.437 6939 ENSG00000125878 transcription factor 15 (basic helix-loop-helix)
47631894 634997 - GC20M000631



48621270 649715 - GC20M000621



49646615 653370 - SRXN1
Exon structure
Hs.516830 140809 ENSG00000271303 sulfiredoxin 1
50653601 656181 + GC20P000653



51646626 675800 - ENSG00000270299
Exon structure


ENSG00000270299
52661596 676179 - SCRT2
Exon structure
Hs.355284 85508 ENSG00000215397 scratch family zinc finger 2
53660779 692740 + LOC105372491
Exon structure

105372491

54703465 703491 + PIR59185
Exon structure




55743236 750110 + GC20P000743



56760080 776015 - SLC52A3
Exon structure
Hs.283865 113278 ENSG00000101276 solute carrier family 52 (riboflavin transporter), member 3
57795725 798949 + GC20P000795



58839401 840020 - RPS10P5
Exon structure

93144 ENSG00000101278 ribosomal protein S10 pseudogene 5
59844769 844798 + PIR36894
Exon structure




60833697 857463 + FAM110A
Exon structure
Hs.574822 83541 ENSG00000125898 family with sequence similarity 110, member A
61846865 846895 - PIR34196
Exon structure




62846865 846895 - GC20M000847



63856476 857432 - GC20M000856



64869899 916375 - ANGPT4
Exon structure
Hs.278973 51378 ENSG00000101280 angiopoietin 4
65913548 938162 + LOC105372492
Exon structure

105372492

66925639 931783 - GC20M000925



67958452 1002284 - RSPO4
Exon structure
Hs.444980 343637 ENSG00000101282 R-spondin 4
681001765 1001795 - PIR43351
Exon structure




691001765 1001795 - GC20M001001



70980373 1024243 - GC20M000980



71980377 1024245 - GC20M000981



721016847 1025695 - LOC105372494
Exon structure

105372494

731027720 1118497 - LOC105372493
Exon structure

105372493 ENSG00000276026
741095631 1096049 + GC20P001095



751101109 1101377 + GC20P001101



761113263 1189415 + PSMF1
Exon structure
Hs.471917 9491 ENSG00000125818 proteasome inhibitor subunit 1
771160509 1162097 + ACTG1P3
Exon structure

75 ENSG00000215388 actin gamma 1 pseudogene 3
781175046 1179952 + LOC105372495
Exon structure

105372495

791180561 1188128 - TMEM74B
Exon structure
Hs.516834 55321 ENSG00000125895 transmembrane protein 74B
801185661 1191878 + LOC105372496
Exon structure

105372496

811186092 1207036 + ENSG00000274269
Exon structure


ENSG00000274269
821203454 1208274 + C20orf202
Exon structure
Hs.148503 400831 ENSG00000215595 chromosome 20 open reading frame 202
831226043 1296421 + RAD21L1
Exon structure
Hs.713451 642636 ENSG00000244588 RAD21 cohesin complex component like 1
841268819 1268847 + PIR62557
Exon structure




851266297 1309328 + SNPH
Exon structure
Hs.323833 9751 ENSG00000101298 syntaphilin
861309909 1329239 - SDCBP2
Exon structure
Hs.657015 27111 ENSG00000125775 syndecan binding protein (syntenin) 2
871320710 1324367 + ENSG00000280162
Exon structure


ENSG00000280162
881309909 1393172 - FKBP1A-SDCBP2
Exon structure

100528031
FKBP1A-SDCBP2 readthrough (NMD candidate)
891325343 1378735 + SDCBP2-AS1
Exon structure
Hs.655785 100507495 ENSG00000234684 SDCBP2 antisense RNA 1
901317571 1393096 - ENSG00000274322
Exon structure


ENSG00000274322
911361622 1362585 + ENSG00000229728
Exon structure


ENSG00000229728
921368977 1393172 - FKBP1A
Exon structure
Hs.700839; Hs.471933 2280 ENSG00000088832 FK506 binding protein 1A, 12kDa
931392900 1392961 - MIR6869
Exon structure

102465524 ENSG00000276741 microRNA 6869
941392992 1393062 - GC20M001394



951392992 1393062 - GC20M001393



961405146 1411146 - LOC105372497
Exon structure

105372497

971413625 1424572 - LOC102724529
Exon structure

102724529

981435782 1436222 - GC20M001435



991442162 1473842 - NSFL1C
Exon structure
Hs.12865 55968 ENSG00000088833 NSFL1 (p97) cofactor (p47)
1001470688 1491587 - SIRPB2
Exon structure
Hs.721685 284759 ENSG00000196209 signal-regulatory protein beta 2
1011488550 1488647 + ENSG00000266085
Exon structure


ENSG00000266085
1021500948 1500976 - PIR45069
Exon structure




1031512542 1515074 - GC20M001526



1041515294 1521871 - LOC105372498
Exon structure

105372498

1051512515 1540023 + LOC105372499
Exon structure

105372499

1061529056 1529159 - RNU6-917P
Exon structure

106479971 ENSG00000252103 RNA, U6 small nuclear 917, pseudogene
1071516759 1557653 - ENSG00000242324
Exon structure


ENSG00000242324
1081534223 1559006 - SIRPD
Exon structure
Hs.729560 128646 ENSG00000125900 signal-regulatory protein delta
1091540144 1620009 - ENSG00000260861
Exon structure


ENSG00000260861
1101591392 1591848 + ENSG00000271523
Exon structure


ENSG00000271523
1111563521 1626497 - SIRPB1
Exon structure
Hs.664861 10326 ENSG00000101307 signal-regulatory protein beta 1
1121633508 1648473 + SIRPG-AS1
Exon structure

101929010 ENSG00000237914 SIRPG antisense RNA 1
1131629152 1686516 - SIRPG
Exon structure
Hs.590883 55423 ENSG00000089012 signal-regulatory protein gamma
1141666360 1666640 + RN7SL561P
Exon structure

106481075 ENSG00000242348 RNA, 7SL, cytoplasmic 561, pseudogene
1151676662 1676907 - ENSG00000236550
Exon structure


ENSG00000236550
1161665283 1708200 - SIRPB3P
Exon structure

100652885 ENSG00000223750 signal-regulatory protein beta 3, pseudogene
1171692913 1727566 - LOC105369219
Exon structure

105369219 ENSG00000234282
1181748090 1748117 + PIR35224
Exon structure




1191756756 1758940 - LOC100533711
Exon structure

100533711 ENSG00000271461
1201767957 1779995 - LOC100289473
Exon structure
Hs.641525 100289473 ENSG00000232528 Cytoskeleton associated protein 2-like pseudogene (est)
1211804016 1817606 - ENSG00000230839
Exon structure


ENSG00000230839
1221870053 1870185 + ENSG00000280922
Exon structure


ENSG00000280922
1231891227 1891256 - PIR58932
Exon structure




1241888128 1894374 - ENSG00000276649
Exon structure


ENSG00000276649
1251894117 1940592 + SIRPA
Exon structure
Hs.581021 140885 ENSG00000198053 signal-regulatory protein alpha
1261947246 2007517 + LOC727993
Exon structure
Hs.551466 727993 ENSG00000233896 Uncharacterized LOC727993 (est)
1271978756 1994285 - PDYN
Exon structure
Hs.22584 5173 ENSG00000101327 prodynorphin
1282075555 2075823 + RPL7P2
Exon structure

140695 ENSG00000227663 ribosomal protein L7 pseudogene 2
1292101013 2102879 - GC20M002101



1302129300 2129944 - GC20M002129



1312099799 2177038 + STK35
Exon structure
Hs.100057 140901 ENSG00000125834 serine/threonine kinase 35
1322144813 2144843 + GC20P002145



1332144813 2144843 + PIR45977
Exon structure




1342144971 2145003 + PIR58563
Exon structure




1352144971 2145003 + GC20P002160



1362145691 2145720 + PIR44615
Exon structure




1372146364 2146394 + PIR43452
Exon structure




1382146364 2146394 + GC20P002156



1392146382 2146412 + PIR38462
Exon structure




1402146382 2146412 + GC20P002149



1412146994 2147023 + PIR47950
Exon structure




1422157212 2157281 - ENSG00000280766
Exon structure


ENSG00000280766
1432184772 2185949 + GC20P002184



1442185504 2186009 + GC20P002185



1452194050 2201397 + LOC105372502
Exon structure

105372502

1462217860 2234556 + GC20P002217



1472206468 2258031 + LOC388780
Exon structure
Hs.132163 388780 ENSG00000226644 Uncharacterized LOC388780 (est)
1482296078 2301491 - LOC105372503
Exon structure

105372503

1492295967 2341079 + TGM3
Exon structure
Hs.2022 7053 ENSG00000125780 transglutaminase 3
1502313202 2326874 + GC20P002313



1512343210 2347341 - GC20M002343



1522352318 2354350 - GC20M002352



1532353320 2356368 + GC20P002353



1542380908 2432753 + TGM6
Exon structure
Hs.452039 343641 ENSG00000166948 transglutaminase 6
1552441596 2445236 + GC20P002441



1562450830 2451118 + GC20P002450



1572453011 2453117 - GC20M002454



1582453010 2453117 - ENSG00000207305
Exon structure


ENSG00000207305
1592458555 2460089 + GC20P002458



1602460783 2461017 + GC20P002460



1612462951 2463047 - GC20M002464



1622462952 2463047 - SNORD119
Exon structure

100113378
small nucleolar RNA, C/D box 119
1632461634 2470853 - SNRPB
Exon structure
Hs.83753 6628 ENSG00000125835 small nuclear ribonucleoprotein polypeptides B and B1
1642474243 2475207 - GC20M002474



1652467212 2508907 - ENSG00000256566
Exon structure


ENSG00000256566
1662480071 2524702 - ZNF343
Exon structure
Hs.516846 79175 ENSG00000088876 zinc finger protein 343
1672534528 2543543 - LOC105372504
Exon structure

105372504

1682536607 2641869 + TMC2
Exon structure
Hs.352626 117532 ENSG00000149488 transmembrane channel-like 2
1692600592 2601698 - GC20M002600



1702613359 2644140 - LOC105372505
Exon structure

105372505

1712643912 2643938 - PIR47652
Exon structure




1722651170 2652071 - GC20M002651



1732652777 2652842 + MIR1292
Exon structure

100302138 ENSG00000221062 microRNA 1292
1742654212 2654286 + SNORD110
Exon structure

692213 ENSG00000221116 small nucleolar RNA, C/D box 110
1752654211 2654286 + GC20P002738



1762654254 2654285 + PIR58104
Exon structure




1772654254 2654285 + GC20P002765



1782655066 2655198 + GC20P002731



1792655066 2655198 + GC20P002777



1802655067 2655198 + SNORA51
Exon structure
Hs.689698 677831 ENSG00000271798 small nucleolar RNA, H/ACA box 51
1812652145 2658393 + NOP56
Exon structure
Hs.376064 10528 ENSG00000101361 NOP56 ribonucleoprotein
1822656096 2656182 + GC20P002737



1832656097 2656182 + SNORD86
Exon structure

692201 ENSG00000212498 small nucleolar RNA, C/D box 86
1842656623 2656694 + GC20P002751



1852656623 2656694 + GC20P002750



1862656624 2656694 + SNORD56
Exon structure

26793 ENSG00000229686 small nucleolar RNA, C/D box 56
1872656939 2656967 + PIR58900
Exon structure




1882656938 2656967 + PIR48264
Exon structure




1892656938 2657010 + GC20P002764



1902656938 2657010 + GC20P002732



1912656939 2657010 + SNORD57
Exon structure

26792 ENSG00000226572 small nucleolar RNA, C/D box 57
1922631328 2684720 + GC20P002782



1932658394 2664219 - IDH3B
Exon structure
Hs.436405 3420 ENSG00000101365 isocitrate dehydrogenase 3 (NAD+) beta
1942664352 2665874 + ENSG00000228293
Exon structure


ENSG00000228293
1952667713 2692614 - LOC105372507
Exon structure

105372507

1962699906 2702859 + GC20P002778



1972703712 2709578 - LOC105372506
Exon structure

105372506

1982718598 2725223 - GC20M002718



1992692878 2760108 + EBF4
Exon structure
Hs.471955 57593 ENSG00000088881 early B-cell factor 4
2002754995 2755022 + PIR31974
Exon structure