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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 20

   GeneLoc map region (0 - 2,776,015 bp) around gene/marker "SLC52A3"

   Explanation:
   SLC52A3 is located at 760,080-776,015 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
183793 83823 + GC20P000083



287250 97094 + DEFB125
Exon structure
Hs.380220 245938 ENSG00000178591 defensin, beta 125
3142369 145751 + DEFB126
Exon structure
Hs.124211 81623 ENSG00000125788 defensin, beta 126
4157470 159163 + DEFB127
Exon structure
Hs.99362 140850 ENSG00000088782 defensin, beta 127
5173229 173296 - ENSG00000274590
Exon structure


ENSG00000274590
6187853 189681 - DEFB128
Exon structure
Hs.516818 245939 ENSG00000185982 defensin, beta 128
7183155 202938 + GC20P000183



8199692 199719 - PIR57210
Exon structure




9218537 218571 + GC20P000218



10227258 229886 + DEFB129
Exon structure
Hs.112087 140881 ENSG00000125903 defensin, beta 129
11257736 261096 + DEFB132
Exon structure
Hs.516819 400830 ENSG00000186458 defensin, beta 132
12261938 261971 + GC20P000261



13265909 269024 + GC20P000265



14267186 268857 + ENSG00000272874
Exon structure


ENSG00000272874
15270863 290778 - C20orf96
Exon structure
Hs.348112 140680 ENSG00000196476 chromosome 20 open reading frame 96
16296968 300321 + ZCCHC3
Exon structure
Hs.28608 85364 ENSG00000247315 zinc finger, CCHC domain containing 3
17325401 330228 + SOX12
Exon structure
Hs.43627; Hs.745045 6666 ENSG00000177732 SRY (sex determining region Y)-box 12
18328527 328545 + GC20P000328



19330772 331864 - GC20M000330



20319687 348224 - NRSN2-AS1
Exon structure
Hs.659689 100507459 ENSG00000225377 NRSN2 antisense RNA 1
21344133 346725 - GC20M000344



22346668 349645 - LOC101929937
Exon structure

101929937

23346726 359660 + NRSN2
Exon structure
Hs.416024 80023 ENSG00000125841 neurensin 2
24354652 355048 + GC20P000354



25362835 397559 + TRIB3
Exon structure
Hs.516826 57761 ENSG00000101255 tribbles pseudokinase 3
26381305 381339 + GC20P000384



27381305 381339 + GC20P000389



28381342 381391 + GC20P000390



29381294 381500 + GC20P000385



30381294 381500 + GC20P000387



31381342 381489 + GC20P000386



32381342 381489 + GC20P000382



33407498 430966 + RBCK1
Exon structure
Hs.247280 10616 ENSG00000125826 RanBP-type and C3HC4-type zinc finger containing 1
34435204 437606 + GC20P000435



35435208 437608 + GC20P000436



36436702 436728 - PIR61983
Exon structure




37436746 436777 - GC20M000436



38436746 436777 - PIR49225
Exon structure




39438190 438216 - PIR47627
Exon structure




40435480 462553 - TBC1D20
Exon structure
Hs.590876 128637 ENSG00000125875 TBC1 domain family, member 20
41450663 450762 + ENSG00000206797
Exon structure


ENSG00000206797
42452416 452445 - PIR53425
Exon structure




43462908 463270 + GC20P000462



44482684 482804 + GC20P000482



45483680 483775 + GC20P000483



46487478 487508 - GC20M000487



47487478 487508 - PIR56447
Exon structure




48487478 487508 - GC20M000488



49473322 543838 - CSNK2A1
Exon structure
Hs.644056 1457 ENSG00000101266 casein kinase 2, alpha 1 polypeptide
50591363 591569 - GC20M000594



51603797 610398 - TCF15
Exon structure
Hs.437 6939 ENSG00000125878 transcription factor 15 (basic helix-loop-helix)
52631894 634997 - GC20M000631



53621270 649715 - GC20M000621



54646615 653370 - SRXN1
Exon structure
Hs.516830 140809 ENSG00000271303 sulfiredoxin 1
55653601 656181 + GC20P000653



56646626 675800 - ENSG00000270299
Exon structure


ENSG00000270299
57661596 676179 - SCRT2
Exon structure
Hs.355284 85508 ENSG00000215397 scratch family zinc finger 2
58703465 703491 + PIR59185
Exon structure




59743236 750110 + GC20P000743



60760080 776015 - SLC52A3
Exon structure
Hs.283865 113278 ENSG00000101276 solute carrier family 52 (riboflavin transporter), member 3
61778792 778826 + GC20P000778



62795725 798949 + GC20P000795



63839401 840020 - RPS10P5
Exon structure

93144 ENSG00000101278 ribosomal protein S10 pseudogene 5
64844769 844798 + PIR36894
Exon structure




65833697 857463 + FAM110A
Exon structure
Hs.574822 83541 ENSG00000125898 family with sequence similarity 110, member A
66846865 846895 - PIR34196
Exon structure




67846865 846895 - GC20M000847



68856476 857432 - GC20M000856



69869899 916334 - ANGPT4
Exon structure
Hs.278973 51378 ENSG00000101280 angiopoietin 4
70925639 931783 - GC20M000925



71958452 1002284 - RSPO4
Exon structure
Hs.444980 343637 ENSG00000101282 R-spondin 4
721001765 1001795 - PIR43351
Exon structure




731001765 1001795 - GC20M001001



74980373 1024243 - GC20M000980



75980377 1024245 - GC20M000981



761095631 1096049 + GC20P001095



771101109 1101377 + GC20P001101



781117847 1118450 - ENSG00000276026
Exon structure


ENSG00000276026
791113263 1189415 + PSMF1
Exon structure
Hs.471917 9491 ENSG00000125818 proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
801160510 1161997 + ACTG1P3
Exon structure

75 ENSG00000215388 actin gamma 1 pseudogene 3
811180561 1185433 - TMEM74B
Exon structure
Hs.516834 55321 ENSG00000125895 transmembrane protein 74B
821186092 1207036 + ENSG00000274269
Exon structure


ENSG00000274269
831203454 1208274 + C20orf202
Exon structure
Hs.148503 400831 ENSG00000215595 chromosome 20 open reading frame 202
841226056 1296421 + RAD21L1
Exon structure
Hs.713451 642636 ENSG00000244588 RAD21-like 1 (S. pombe)
851268819 1268847 + PIR62557
Exon structure




861266304 1309328 + SNPH
Exon structure
Hs.323833 9751 ENSG00000101298 syntaphilin
871309909 1329239 - SDCBP2
Exon structure
Hs.657015 27111 ENSG00000125775 syndecan binding protein (syntenin) 2
881320710 1324367 + ENSG00000280162
Exon structure


ENSG00000280162
891309909 1393172 - FKBP1A-SDCBP2
Exon structure

100528031
FKBP1A-SDCBP2 readthrough (NMD candidate)
901325343 1378735 + SDCBP2-AS1
Exon structure
Hs.655785 100507495 ENSG00000234684 SDCBP2 antisense RNA 1
911317571 1393096 - ENSG00000274322
Exon structure


ENSG00000274322
921361622 1362585 + ENSG00000229728
Exon structure


ENSG00000229728
931368977 1393172 - FKBP1A
Exon structure
Hs.700839; Hs.471933 2280 ENSG00000088832 FK506 binding protein 1A, 12kDa
941392900 1392961 - MIR6869
Exon structure

102465524 ENSG00000276741 microRNA 6869
951392992 1393062 - GC20M001393



961392992 1393062 - GC20M001394



971417410 1423925 - LOC102724529
Exon structure

102724529

981435782 1436222 - GC20M001435



991442162 1473842 - NSFL1C
Exon structure
Hs.12865 55968 ENSG00000088833 NSFL1 (p97) cofactor (p47)
1001470741 1491587 - SIRPB2
Exon structure
Hs.721685 284759 ENSG00000196209 signal-regulatory protein beta 2
1011488550 1488647 + ENSG00000266085
Exon structure


ENSG00000266085
1021500948 1500976 - PIR45069
Exon structure




1031512542 1515074 - GC20M001524



1041529056 1529159 - RNU6-917P
Exon structure

hugo3057 ENSG00000252103 RNA, U6 small nuclear 917, pseudogene
1051516759 1557653 - ENSG00000242324
Exon structure


ENSG00000242324
1061534251 1558979 - SIRPD
Exon structure
Hs.729560 128646 ENSG00000125900 signal-regulatory protein delta
1071540144 1620009 - ENSG00000260861
Exon structure


ENSG00000260861
1081591392 1591848 + ENSG00000271523
Exon structure


ENSG00000271523
1091563521 1626548 - SIRPB1
Exon structure
Hs.664861 10326 ENSG00000101307 signal-regulatory protein beta 1
1101633508 1648473 + SIRPG-AS1
Exon structure

101929010 ENSG00000237914 SIRPG antisense RNA 1
1111628876 1657779 - SIRPG
Exon structure
Hs.590883 55423 ENSG00000089012 signal-regulatory protein gamma
1121666360 1666638 + GC20P001666



1131666360 1666640 + RN7SL561P
Exon structure

hugo1253 ENSG00000242348 RNA, 7SL, cytoplasmic 561, pseudogene
1141676662 1676907 - ENSG00000236550
Exon structure


ENSG00000236550
1151665283 1735970 - SIRPB3P
Exon structure

100652885 ENSG00000223750 signal-regulatory protein beta 3, pseudogene
1161722045 1722537 - ENSG00000234282
Exon structure


ENSG00000234282
1171748090 1748117 + PIR35224
Exon structure




1181756756 1758940 - LOC100533711
Exon structure

100533711 ENSG00000271461
1191767957 1779995 - LOC100289473
Exon structure
Hs.641525 100289473 ENSG00000232528 Cytoskeleton associated protein 2-like pseudogene (est)
1201804016 1817606 - ENSG00000230839
Exon structure


ENSG00000230839
1211891227 1891256 - PIR58932
Exon structure




1221888128 1894446 - LOC102724545
Exon structure

102724545 ENSG00000276649
1231894117 1940592 + SIRPA
Exon structure
Hs.581021 140885 ENSG00000198053 signal-regulatory protein alpha
1241953436 1953636 + GC20P001953



1251947246 2007517 + LOC727993
Exon structure
Hs.551466 727993 ENSG00000233896 Uncharacterized LOC727993 (est)
1261978756 1994285 - PDYN
Exon structure
Hs.22584 5173 ENSG00000101327 prodynorphin
1272075555 2075823 + RPL7P2
Exon structure

140695 ENSG00000227663 ribosomal protein L7 pseudogene 2
1282101013 2102879 - GC20M002101



1292129300 2129944 - GC20M002129



1302101611 2177038 + STK35
Exon structure
Hs.100057 140901 ENSG00000125834 serine/threonine kinase 35
1312144813 2144843 + PIR45977
Exon structure




1322144813 2144843 + GC20P002156



1332144971 2145003 + PIR58563
Exon structure




1342144971 2145003 + GC20P002145



1352145691 2145720 + PIR44615
Exon structure




1362146364 2146394 + PIR43452
Exon structure




1372146364 2146394 + GC20P002149



1382146382 2146412 + GC20P002160



1392146382 2146412 + PIR38462
Exon structure




1402146994 2147023 + PIR47950
Exon structure




1412184772 2185949 + GC20P002184



1422185504 2186009 + GC20P002185



1432206928 2213151 + LOC388780
Exon structure
Hs.132163 388780 ENSG00000226644 Uncharacterized LOC388780 (est)
1442217860 2234556 + GC20P002217



1452295967 2341079 + TGM3
Exon structure
Hs.2022 7053 ENSG00000125780 transglutaminase 3
1462313202 2326874 + GC20P002313



1472343210 2347341 - GC20M002343



1482352318 2354350 - GC20M002352



1492353320 2356368 + GC20P002353



1502380908 2432753 + TGM6
Exon structure
Hs.452039 343641 ENSG00000166948 transglutaminase 6
1512441596 2445236 + GC20P002441



1522450830 2451118 + GC20P002450



1532453010 2453117 - ENSG00000207305
Exon structure


ENSG00000207305
1542453011 2453117 - GC20M002454



1552458555 2460089 + GC20P002458



1562460783 2461017 + GC20P002460



1572462951 2463047 - GC20M002464



1582462952 2463047 - SNORD119
Exon structure

100113378
small nucleolar RNA, C/D box 119
1592461634 2470853 - SNRPB
Exon structure
Hs.83753 6628 ENSG00000125835 small nuclear ribonucleoprotein polypeptides B and B1
1602474243 2475207 - GC20M002474



1612467212 2508907 - ENSG00000256566
Exon structure


ENSG00000256566
1622481817 2524702 - ZNF343
Exon structure
Hs.516846 79175 ENSG00000088876 zinc finger protein 343
1632536607 2641848 + TMC2
Exon structure
Hs.352626 117532 ENSG00000149488 transmembrane channel-like 2
1642600592 2601698 - GC20M002600



1652643912 2643938 - PIR47652
Exon structure




1662651170 2652071 - GC20M002651



1672652777 2652842 + MIR1292
Exon structure

100302138 ENSG00000221062 microRNA 1292
1682654211 2654286 + GC20P002729



1692654212 2654286 + SNORD110
Exon structure

692213 ENSG00000221116 small nucleolar RNA, C/D box 110
1702654254 2654285 + GC20P002738



1712654254 2654285 + PIR58104
Exon structure




1722655066 2655198 + GC20P002719



1732655066 2655198 + GC20P002750



1742655067 2655198 + SNORA51
Exon structure
Hs.689698 677831 ENSG00000271798 small nucleolar RNA, H/ACA box 51
1752652145 2658393 + NOP56
Exon structure
Hs.376064 10528 ENSG00000101361 NOP56 ribonucleoprotein
1762656096 2656182 + GC20P002728



1772656097 2656182 + SNORD86
Exon structure

692201 ENSG00000212498 small nucleolar RNA, C/D box 86
1782656624 2656694 + SNORD56
Exon structure

26793 ENSG00000229686 small nucleolar RNA, C/D box 56
1792656623 2656694 + GC20P002730



1802656623 2656694 + GC20P002732



1812656623 2656694 + GC20P002731



1822656938 2657010 + PIR58900
Exon structure




1832656938 2657010 + GC20P002721



1842656938 2657010 + GC20P002737



1852656939 2657010 + SNORD57
Exon structure

26792 ENSG00000226572 small nucleolar RNA, C/D box 57
1862631328 2684720 + GC20P002757



1872658395 2664219 - IDH3B
Exon structure
Hs.436405 3420 ENSG00000101365 isocitrate dehydrogenase 3 (NAD+) beta
1882664352 2665874 + ENSG00000228293
Exon structure


ENSG00000228293
1892699906 2702859 + GC20P002751



1902718598 2725223 - GC20M002718



1912692878 2760108 + EBF4
Exon structure
Hs.471955 57593 ENSG00000088881 early B-cell factor 4
1922754995 2755022 + PIR31974
Exon structure