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  Chromosome 2

   GeneLoc map region (236,232,646 - 240,323,018 bp) around gene/marker "COL6A3"

   Explanation:
   COL6A3 is located at 238,232,646-238,323,018 bp

    [ GeneLoc Home Page ]


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#
Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
1236235002 236235095 + ENSG00000216002
Exon structure


ENSG00000216002
2236414395 236416210 + AGAP1-IT1
Exon structure
Hs.684184 100506749 ENSG00000235529 AGAP1 intronic transcript 1 (non-protein coding)
3236480575 236480647 + ENSG00000221704
Exon structure


ENSG00000221704
4236568889 236568916 + PIR48120
Exon structure




5236578410 236578436 + PIR61952
Exon structure




6236578823 236578851 + PIR52289
Exon structure




7236653416 236653446 + PIR61578
Exon structure




8236653429 236653457 + PIR48898
Exon structure




9236659057 236659084 + PIR31689
Exon structure




10236659077 236659103 + PIR61585
Exon structure




11236659086 236659117 + PIR31730
Exon structure




12236682499 236692031 - ENSG00000222007
Exon structure


ENSG00000222007
13236706403 236706431 + PIR45748
Exon structure




14236402733 237035198 + AGAP1
Exon structure
Hs.435039 116987 ENSG00000157985 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
15236790761 236791171 - TMSB10P1
Exon structure

100506723 ENSG00000228499 thymosin beta 10 pseudogene 1
16236806838 236807025 + GC02P236808



17236826339 236826460 + GC02P236828



18236839406 236839433 + PIR32392
Exon structure




19236888927 236889120 + GC02P236891



20236916211 236918759 + GC02P236918



21236924354 236924576 + GC02P236928



22236945297 236945327 - GC02M236947



23236945297 236945327 - GC02M236946



24236945894 236945955 + RNU7-127P
Exon structure

hugo3306 ENSG00000238812 RNA, U7 small nuclear 127 pseudogene
25236945905 236945955 + GC02P236948



26236949413 236949440 + PIR58542
Exon structure




27236963271 236963431 + GC02P236965



28236980939 236981196 + RN7SL204P
Exon structure

hugo853 ENSG00000264676 RNA, 7SL, cytoplasmic 204, pseudogene
29236990772 236991092 + GC02P236993



30237016553 237016579 + PIR53345
Exon structure




31237028838 237028866 + PIR31915
Exon structure




32237028855 237028881 + PIR37014
Exon structure




33237033173 237033202 + PIR61164
Exon structure




34237033289 237033321 + PIR56704
Exon structure




35237033289 237033321 + GC02P237052



36237034496 237034524 + PIR46003
Exon structure




37237036618 237036646 + PIR42962
Exon structure




38237036920 237036949 + PIR38230
Exon structure




39237037182 237037212 + PIR43825
Exon structure




40237039012 237039041 + PIR45105
Exon structure




41237039012 237039041 + GC02P237053



42237039237 237039263 + PIR47716
Exon structure




43237061716 237061816 - GC02M237063



44237061715 237061816 - ENSG00000207049
Exon structure


ENSG00000207049
45237073879 237077012 - GBX2
Exon structure
Hs.184945 2637 ENSG00000168505 gastrulation brain homeobox 2
46237080622 237080999 + GC02P237083



47237119015 237119191 - GC02M237122



48237119016 237119191 - RNU1-31P
Exon structure

hugo1721 ENSG00000200745 RNA, U1 small nuclear 31, pseudogene
49237102095 237173052 - ASB18
Exon structure
Hs.639909 401036 ENSG00000182177 ankyrin repeat and SOCS box containing 18
50237076090 237203570 + ENSG00000233611
Exon structure


ENSG00000233611
51237276203 237277745 + ENSG00000270540
Exon structure


ENSG00000270540
52237299717 237301031 + ENSG00000232893
Exon structure


ENSG00000232893
53237306763 237326188 + GC02P237308



54237316433 237317746 - RPL3P5
Exon structure

100130450 ENSG00000231546 ribosomal protein L3 pseudogene 5
55237232794 237416185 - IQCA1
Exon structure
Hs.711488; Hs.621320; Hs.591594 79781 ENSG00000132321 IQ motif containing with AAA domain 1
56237326155 237327745 + GC02P237328



57237374262 237374289 - PIR46430
Exon structure




58237483125 237483980 + GC02P237486



59237476430 237491001 + ACKR3
Exon structure
Hs.471751 57007 ENSG00000144476 atypical chemokine receptor 3
60237489108 237489302 + GC02P237491



61237621980 237629549 - GC02M237623



62237642025 237663006 + ENSG00000232328
Exon structure


ENSG00000232328
63237661416 237663006 + GC02P237662



64237696291 237697479 - GC02M237699



65237923846 237923948 - GC02M237926



66237923847 237923948 - RNU6-1051P
Exon structure

hugo2010 ENSG00000202341 RNA, U6 small nuclear 1051, pseudogene
67237957242 237964827 - LOC93463
Exon structure
Hs.652810 93463 ENSG00000124835 Uncharacterized LOC93463 (est)
68237949128 237994460 - GC02M237950



69237968077 237994460 - ENSG00000227252
Exon structure


ENSG00000227252
70237993955 238009109 + COPS8
Exon structure
Hs.531713 10920 ENSG00000198612 COP9 signalosome subunit 8
71238031553 238032740 - ENSG00000224844
Exon structure


ENSG00000224844
72238031499 238067164 - GC02M238032



73238059251 238061515 + GC02P238062



74238090658 238092946 - GC02M238092



75238121307 238121926 + GC02P238123



76238130857 238134992 + GC02P238132



77238165734 238166319 + ENSG00000224132
Exon structure


ENSG00000224132
78238165789 238166289 + GC02P238168



79238186358 238199907 + GC02P238188



80238199649 238203343 - GC02M238201



81238232646 238323018 - COL6A3
Exon structure
Hs.233240 1293 ENSG00000163359 collagen, type VI, alpha 3
82238330063 238333919 - ENSG00000222022
Exon structure


ENSG00000222022
83238337563 238343465 - ENSG00000222032
Exon structure


ENSG00000222032
84238394071 238463961 + MLPH
Exon structure
Hs.102406 79083 ENSG00000115648 melanophilin
85238471808 238471913 + RNU6-1140P
Exon structure

hugo2108 ENSG00000222449 RNA, U6 small nuclear 1140, pseudogene
86238475217 238475818 + PRLH
Exon structure
Hs.247710 51052 ENSG00000071677 prolactin releasing hormone
87238482965 238510257 - RAB17
Exon structure
Hs.44278 64284 ENSG00000124839 RAB17, member RAS oncogene family
88238499663 238504624 + ENSG00000234949
Exon structure


ENSG00000234949
89238511908 238511937 - PIR37838
Exon structure




90238513305 238513332 + PIR33254
Exon structure




91238521620 238535168 + ENSG00000227107
Exon structure


ENSG00000227107
92238536219 238722325 + LRRFIP1
Exon structure
Hs.471779 9208 ENSG00000124831 leucine rich repeat (in FLII) interacting protein 1
93238630393 238630419 + PIR56300
Exon structure




94238617184 238688130 + GC02P238620



95238707032 238751451 + RBM44
Exon structure
Hs.720233 375316 ENSG00000177483 RNA binding motif protein 44
96238778547 238778625 + ENSG00000263723
Exon structure


ENSG00000263723
97238778546 238778625 + GC02P238782



98238767536 238820756 + RAMP1
Exon structure
Hs.471783 10267 ENSG00000132329 receptor (G protein-coupled) activity modifying protein 1
99238832046 238871314 - GC02M238834



100238854396 238870550 + GC02P238856



101238871278 238871309 + PIR38971
Exon structure




102238871278 238871309 + GC02P238873



103238872089 238874000 - GC02M238874



104238875469 238951423 + UBE2F
Exon structure
Hs.471785 140739 ENSG00000184182 ubiquitin-conjugating enzyme E2F (putative)
105238937612 238937704 - RNU6-1333P
Exon structure

hugo2322 ENSG00000251971 RNA, U6 small nuclear 1333, pseudogene
106238875587 239008054 + UBE2F-SCLY
Exon structure

100533179 ENSG00000258984 UBE2F-SCLY readthrough (NMD candidate)
107238950358 238950387 + PIR44043
Exon structure




108238969530 239008054 + SCLY
Exon structure
Hs.731909 51540 ENSG00000132330 selenocysteine lyase
109239008798 239041928 + ESPNL
Exon structure
Hs.127724 339768 ENSG00000144488 espin-like
110239047363 239061588 + KLHL30
Exon structure
Hs.591595 377007 ENSG00000168427 kelch-like family member 30
111239061529 239064635 - GC02M239064



112239067623 239077541 + FAM132B
Exon structure
Hs.742300; Hs.24951 151176 ENSG00000178752 family with sequence similarity 132, member B
113239072910 239077462 + GC02P239079



114239079042 239112370 - ILKAP
Exon structure
Hs.92033 80895 ENSG00000132323 integrin-linked kinase-associated serine/threonine phosphatase
115239084069 239128434 - GC02M239086



116239129361 239129392 - PIR41435
Exon structure




117239129450 239129476 - PIR35803
Exon structure




118239133968 239134003 - PIR37977
Exon structure




119239133972 239134003 - GC02M239199



120239134022 239134051 - PIR43240
Exon structure




121239134106 239134134 - PIR42993
Exon structure




122239134217 239134243 - PIR36448
Exon structure




123239134403 239134432 - PIR35750
Exon structure




124239134514 239134544 - PIR35424
Exon structure




125239134514 239134544 - GC02M239197



126239134515 239134544 - GC02M239198



127239134583 239134614 - PIR58239
Exon structure




128239134866 239134892 - PIR35784
Exon structure




129239134957 239134987 - PIR62755
Exon structure




130239133193 239140318 - LOC151174
Exon structure
Hs.424165 151174 ENSG00000186235 Uncharacterized LOC151174 (est)
131239139978 239140004 - PIR62536
Exon structure




132239139991 239140018 - PIR62443
Exon structure




133239140550 239140579 + PIR41220
Exon structure




134239140326 239142985 + GC02P239145



135239143096 239145847 + GC02P239147



136239146908 239149303 - HES6
Exon structure
Hs.42949 55502 ENSG00000144485 hairy and enhancer of split 6 (Drosophila)
137239140325 239164274 + LOC643387
Exon structure
Hs.598359 643387 ENSG00000225057 TAR DNA binding protein pseudogene (est)
138239152679 239198743 - PER2
Exon structure
Hs.58756 8864 ENSG00000132326 period circadian clock 2
139239184399 239184428 - PIR48935
Exon structure




140239192329 239192498 + ENSG00000268396
Exon structure


ENSG00000268396
141239207351 239209261 - ENSG00000232306
Exon structure


ENSG00000232306
142239229082 239309541 + TRAF3IP1
Exon structure
Hs.631898 26146 ENSG00000204104 TNF receptor-associated factor 3 interacting protein 1
143239310510 239310536 + PIR60245
Exon structure




144239314387 239314414 + PIR60079
Exon structure




145239321284 239321386 + GC02P239324



146239321283 239321386 + RNU6-234P
Exon structure

hugo2436 ENSG00000202099 RNA, U6 small nuclear 234, pseudogene
147239334019 239335530 - GC02M239340



148239335718 239336370 - ENSG00000229915
Exon structure


ENSG00000229915
149239335383 239360891 + ASB1
Exon structure
Hs.516788 51665 ENSG00000065802 ankyrin repeat and SOCS box containing 1
150239354112 239354138 + PIR56687
Exon structure




151239355030 239355058 + PIR43798
Exon structure




152239355231 239355261 + GC02P239395



153239355231 239355261 + PIR47124
Exon structure




154239356322 239356352 + PIR41942
Exon structure




155239356555 239356584 + PIR56794
Exon structure




156239356696 239356725 + PIR53287
Exon structure




157239357492 239357521 + PIR57812
Exon structure




158239358046 239358077 + PIR40229
Exon structure




159239358598 239358626 + PIR48927
Exon structure




160239359178 239359207 + PIR58312
Exon structure




161239359266 239359295 + PIR48899
Exon structure




162239362038 239363107 - GC02M239364



163239363163 239363837 + LOC100419686
Exon structure

100419686

164239364497 239364523 + PIR60955
Exon structure




165239366831 239366857 + PIR59199
Exon structure




166239402771 239402797 + PIR42903
Exon structure




167239418443 239418469 + PIR55524
Exon structure




168239419331 239464140 - LOC151171
Exon structure
Hs.652076 151171 ENSG00000225493 Uncharacterized LOC151171 (est)
169239445717 239445746 - PIR36717
Exon structure




170239447344 239447371 + PIR57678
Exon structure




171239447669 239447696 + PIR34018
Exon structure




172239447769 239447796 - PIR54362
Exon structure




173239450001 239450029 + PIR42661
Exon structure




174239453038 239453065 + PIR48798
Exon structure




175239453219 239453248 - PIR42207
Exon structure




176239453554 239453581 + PIR37829
Exon structure




177239458167 239458196 + PIR51378
Exon structure




178239458803 239458830 + PIR44948
Exon structure




179239458951 239458977 + PIR44086
Exon structure




180239496915 239497169 + GC02P239499



181239628965 239649421 + ENSG00000234279
Exon structure


ENSG00000234279
182239643904 239644188 - ENSG00000224252
Exon structure


ENSG00000224252
183239697289 239698357 - ENSG00000226992
Exon structure


ENSG00000226992
184239711519 239711632 + GC02P239715



185239755218 239756320 - LOC100287387
Exon structure
Hs.516864 100287387
Uncharacterized LOC100287387 (est)
186239756673 239795893 + TWIST2
Exon structure
Hs.422585 117581 ENSG00000233608 twist basic helix-loop-helix transcription factor 2
187239840997 239847965 - GC02M239842



188239840998 239847965 - FLJ43879
Exon structure
Hs.516791 401039 ENSG00000227744 FLJ43879 protein (est)
189239894624 239894706 - ENSG00000211566
Exon structure


ENSG00000211566
190239928722 239931139 - ENSG00000260506
Exon structure


ENSG00000260506
191239990513 239990610 - MIR4440
Exon structure

100616397 ENSG00000266109 microRNA 4440
192239990615 239990708 - ENSG00000265332
Exon structure


ENSG00000265332
193239990762 239990855 - ENSG00000266360
Exon structure


ENSG00000266360
194239990860 239990953 - ENSG00000263743
Exon structure


ENSG00000263743
195239991056 239991149 - ENSG00000264103
Exon structure


ENSG00000264103
196239991154 239991247 - ENSG00000264518
Exon structure


ENSG00000264518
197239991301 239991394 - ENSG00000265979
Exon structure


ENSG00000265979
198239991448 239991541 - ENSG00000264730
Exon structure


ENSG00000264730
199240007394 240007492 - ENSG00000265891
Exon structure


ENSG00000265891
200240007523 240007622 - MIR4441
Exon structure

100616493 ENSG00000264810 microRNA 4441
201240008039 240008138 - ENSG00000265416
Exon structure


ENSG00000265416
202240083493 240084053 - ENSG00000213828
Exon structure


ENSG00000213828
203240115027 240117153 - MGC16025
Exon structure
Hs.744565 85009
Uncharacterized LOC85009 (est)
204239969864 240323348 - HDAC4
Exon structure
Hs.20516 9759 ENSG00000068024 histone deacetylase 4
205240176885 240178428 - GC02M240178



206240212328 240217470 + GC02P240215



207240227157 240227240 + MIR4269
Exon structure

100423043 ENSG00000265215 microRNA 4269
208240269215 240270842 - LOC100128563
Exon structure
Hs.689442 100128563
Uncharacterized LOC100128563 (est)
209240273419 240273499 - MIR2467
Exon structure

100616360 ENSG00000264292 microRNA 2467