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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 2

   GeneLoc map region (230,373,137 - 234,379,050 bp) around gene/marker "LINC00471"

   Explanation:
   LINC00471 is located at 232,373,137-232,379,050 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
1232578024 232578108 + MIR1244-3
Exon structure

100422872
microRNA 1244-3
2230222345 230579286 - DNER
Exon structure
Hs.234074 92737 ENSG00000187957 delta/notch-like EGF repeat containing
3230470954 230471015 + RNU7-9P
Exon structure

100147757 ENSG00000238782 RNA, U7 small nuclear 9 pseudogene
4230470965 230471015 + GC02P230474



5230566510 230566864 + ENSG00000235993
Exon structure


ENSG00000235993
6230656690 230658084 - GC02M230657



7230659577 230661448 - GC02M230659



8230664062 230664090 - PIR44053
Exon structure




9230675673 230679209 - GC02M230675



10230628554 230787955 - TRIP12
Exon structure
Hs.591633 9320 ENSG00000153827 thyroid hormone receptor interactor 12
11230759062 230759169 + ENSG00000222344
Exon structure


ENSG00000222344
12230802530 230802598 - ENSG00000252333
Exon structure


ENSG00000252333
13230807444 230809853 + FBXO36-IT1
Exon structure

100874344 ENSG00000231534 FBXO36 intronic transcript 1 (non-protein coding)
14230787207 230841890 + GC02P230788



15230787018 230877825 + FBXO36
Exon structure
Hs.140666 130888 ENSG00000153832 F-box protein 36
16230838031 230838137 + ENSG00000206725
Exon structure


ENSG00000206725
17230888124 230888369 - GC02M230888



18230892398 230892670 - GC02M230892



19230899690 230933715 - SLC16A14
Exon structure
Hs.504317 151473 ENSG00000163053 solute carrier family 16, member 14
20230922946 230923040 - GC02M230926



21230922945 230923040 - RNY4P19
Exon structure

100169834 ENSG00000199400 RNA, Ro-associated Y4 pseudogene 19
22230941721 230941738 + GC02P230941



23230989749 231032210 + GC02P230995



24230990026 231038939 + ENSG00000225963
Exon structure


ENSG00000225963
25231032009 231038230 - GC02M231032



26231036815 231038939 + GC02P231037



27231042082 231042973 - GC02M231042



28231032009 231090444 - SP110
Exon structure
Hs.145150 3431 ENSG00000135899 SP110 nuclear body protein
29231065184 231076262 - GC02M231065



30231067826 231110628 + GC02P231068



31231134613 231152812 + GC02P231134



32231067826 231223762 + SP140
Exon structure
Hs.632549 11262 ENSG00000079263 SP140 nuclear body protein
33231159004 231176238 + GC02P231159



34231174307 231176000 - GC02M231177



35231191894 231268447 + SP140L
Exon structure
Hs.589661 93349 ENSG00000185404 SP140 nuclear body protein-like
36231235621 231268445 + GC02P231235



37231275414 231277244 - GC02M231280



38231281471 231335232 + GC02P231281



39231328333 231331862 + GC02P231329



40231330481 231330918 - GC02M231333



41231280657 231410317 + SP100
Exon structure
Hs.369056 6672 ENSG00000067066 SP100 nuclear antigen
42231337832 231363237 + GC02P231337



43231360032 231378009 - GC02M231360



44231368932 231371481 + GC02P231368



45231371816 231372099 + RN7SL834P
Exon structure

hugo1649 ENSG00000243650 RNA, 7SL, cytoplasmic 834, pseudogene
46231379576 231380916 + HMGB1P3
Exon structure

10356 ENSG00000250011 high mobility group box 1 pseudogene 3
47231412423 231412717 + GC02P231412



48231385309 231444721 - ENSG00000235419
Exon structure


ENSG00000235419
49231436610 231438671 - TPM3P8
Exon structure

646839 ENSG00000183022 tropomyosin 3 pseudogene 8
50231450743 231451708 - GC02M231453



51231451836 231451942 + ENSG00000199791
Exon structure


ENSG00000199791
52231451839 231451942 + GC02P231455



53231555636 231565244 - AC098823.3
Exon structure
Hs.528154 151475 ENSG00000226125 Uncharacterized LOC151475 (est)
54231589467 231590194 - BANF1P3
Exon structure

100505506 ENSG00000237758 barrier to autointegration factor 1 pseudogene 3
55231616856 231616962 + ENSG00000201044
Exon structure


ENSG00000201044
56231616855 231616962 + GC02P231621



57231577557 231685790 + CAB39
Exon structure
Hs.603930 51719 ENSG00000135932 calcium binding protein 39
58231643721 231655693 + GC02P231643



59231678698 231682897 + GC02P231678



60231701624 231702100 + ENSG00000270891
Exon structure


ENSG00000270891
61231729354 231743963 + ITM2C
Exon structure
Hs.111577 81618 ENSG00000135916 integral membrane protein 2C
62231751215 231769232 + AC012507.3
Exon structure
Hs.559309 151484 ENSG00000232520 Uncharacterized LOC151484 (est)
63231773567 231774817 + ENSG00000230385
Exon structure


ENSG00000230385
64231793462 231794605 + GC02P231793



65231772033 231825781 - GPR55
Exon structure
Hs.114545 9290 ENSG00000135898 G protein-coupled receptor 55
66231808457 231823061 + GC02P231811



67231812752 231822669 + COX20P2
Exon structure

100289170 ENSG00000235013 COX20 cytochrome C oxidase assembly factor pseudogene 2
68231849083 231860747 - SPATA3-AS1
Exon structure
Hs.404807 348761 ENSG00000238062 SPATA3 antisense RNA 1 (head to head)
69231864284 231871986 + GC02P231864



70231860836 231889770 + SPATA3
Exon structure
Hs.745178 130560 ENSG00000173699 spermatogenesis associated 3
71231902205 231914434 + C2orf72
Exon structure
Hs.526596; Hs.551993 257407 ENSG00000204128 chromosome 2 open reading frame 72
72231911711 231911741 + PIR41760
Exon structure




73231911711 231911741 + GC02P231913



74231916754 231917352 + GC02P231919



75231916755 231917352 + ENSG00000261829
Exon structure


ENSG00000261829
76231949794 231973836 + GC02P231949



77231921578 232037541 + PSMD1
Exon structure
Hs.3887 5707 ENSG00000173692 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
78231974097 231988260 - GC02M231978



79231972944 231989832 - HTR2B
Exon structure
Hs.421649 3357 ENSG00000135914 5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
80231998176 231998344 + ENSG00000201574
Exon structure


ENSG00000201574
81232018183 232030608 + GC02P232018



82232035116 232037474 + GC02P232035



83232118162 232118798 - GC02M232118



84232120778 232120815 + GC02P232139



85232120778 232120815 + GC02P232145



86232120778 232120815 + GC02P232146



87232120810 232120839 + PIR47909
Exon structure




88232120810 232121019 + GC02P232142



89232120779 232121170 + RPS28P4
Exon structure

645899 ENSG00000237039 ribosomal protein S28 pseudogene 4
90232123678 232143140 + GC02P232143



91232063260 232239548 + ARMC9
Exon structure
Hs.471610 80210 ENSG00000135931 armadillo repeat containing 9
92232189114 232189629 + GC02P232196



93232189114 232189629 + GC02P232195



94232220510 232225661 + GC02P232226



95232227419 232227504 + MIR4777
Exon structure

100616317 ENSG00000263641 microRNA 4777
96232235285 232236930 + GC02P232235



97232238232 232238260 + PIR42725
Exon structure




98232238626 232238655 + PIR56036
Exon structure




99232240892 232240923 + PIR53220
Exon structure




100232253687 232259702 + ENSG00000224376
Exon structure


ENSG00000224376
101232256781 232256809 - PIR50605
Exon structure




102232260254 232265875 + B3GNT7
Exon structure
Hs.299329 93010 ENSG00000156966 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
103232266425 232266453 + PIR46475
Exon structure




104232271241 232271267 - PIR31028
Exon structure




105232273252 232273280 + PIR40760
Exon structure




106232298483 232299141 - ZBTB8OSP2
Exon structure

729898 ENSG00000172799 zinc finger and BTB domain containing 8 opposite strand pseudogene 2
107232301812 232302132 - LOC100289360
Exon structure

100289360 ENSG00000230047
108232316906 232317864 + ENSG00000233538
Exon structure


ENSG00000233538
109232320252 232320279 - PIR47677
Exon structure




110232320511 232320647 - SNORA75
Exon structure
Hs.674388 654321 ENSG00000206885 small nucleolar RNA, H/ACA box 75
111232320510 232320647 - GC02M232348



112232321154 232321234 - GC02M232349



113232321154 232321234 - PIR48380
Exon structure




114232321155 232321234 - SNORD20
Exon structure

6082 ENSG00000207280 small nucleolar RNA, C/D box 20
115232325084 232325113 - PIR31651
Exon structure




116232325080 232325148 - GC02M232350



117232325079 232325153 - SNORD82
Exon structure

25826 ENSG00000202400 small nucleolar RNA, C/D box 82
118232325502 232325528 - PIR44191
Exon structure




119232327703 232329090 - GC02M232347



120232318242 232348352 - NCL
Exon structure
Hs.79110 4691 ENSG00000115053 nucleolin
121232354915 232355000 - ENSG00000263774
Exon structure


ENSG00000263774
122232359501 232359528 - PIR38251
Exon structure




123232361855 232361882 - PIR45954
Exon structure




124232363494 232364528 + GC02P232363



125232364885 232364916 + PIR44442
Exon structure




126232364885 232364916 + GC02P232368



127232364885 232364916 + GC02P232369



128232362229 232370073 - GC02M232372



129232361801 232371350 - LOC100418727
Exon structure

100418727 ENSG00000223198
130232366701 232366912 - GC02M232371



131232366755 232366912 - GC02M232370



132232373137 232379050 - LINC00471
Exon structure
Hs.375211 151477 ENSG00000181798 long intergenic non-protein coding RNA 471
133232383100 232385297 + GC02P232384



134232387871 232395206 - NMUR1
Exon structure
Hs.471619 10316 ENSG00000171596 neuromedin U receptor 1
135232424559 232425108 + RPL21P35
Exon structure

100270955 ENSG00000231494 ribosomal protein L21 pseudogene 35
136232424614 232425075 + GC02P232426



137232450575 232451038 + GC02P232452



138232450575 232455638 + RPL23AP26
Exon structure

391490 ENSG00000228884 ribosomal protein L23a pseudogene 26
139232450775 232457474 - GC02M232450



140232457575 232458994 + C2orf57
Exon structure
Hs.98104 165100 ENSG00000177673 chromosome 2 open reading frame 57
141232467660 232469395 - GC02M232467



142232469641 232474863 + GC02P232469



143232473220 232473247 + PIR57970
Exon structure




144232510711 232510984 - RN7SL499P
Exon structure

hugo1281 ENSG00000239202 RNA, 7SL, cytoplasmic 499, pseudogene
145232543680 232543977 - GC02M232543



146232554971 232556966 + GC02P232554



147232569883 232572029 - GC02M232569



148232571517 232571621 - ENSG00000269363
Exon structure


ENSG00000269363
149232571605 232578251 + PTMA
Exon structure
Hs.459927 5757 ENSG00000187514 prothymosin, alpha
150232573240 232578216 + GC02P232573



151232576234 232576357 + GC02P232582



152232597135 232650982 - PDE6D
Exon structure
Hs.516808 5147 ENSG00000156973 phosphodiesterase 6D, cGMP-specific, rod, delta
153232643432 232645989 - GC02M232649



154232643433 232645992 - GC02M232650



155232646417 232653859 + GC02P232647



156232654191 232654597 - RPL28P2
Exon structure

100270971 ENSG00000237641 ribosomal protein L28 pseudogene 2
157232646381 232673963 + COPS7B
Exon structure
Hs.335061 64708 ENSG00000144524 COP9 signalosome subunit 7B
158232674784 232675554 - GAMTP1
Exon structure

391491 ENSG00000260622 guanidinoacetate N-methyltransferase pseudogene 1
159232674556 232677062 + ENSG00000261096
Exon structure


ENSG00000261096
160232756952 232757008 - MIR1471
Exon structure

100302126 ENSG00000222246 microRNA 1471
161232786530 232791113 - NPPC
Exon structure
Hs.247916; Hs.627236 4880 ENSG00000163273 natriuretic peptide C
162232843198 232880430 - ENSG00000227033
Exon structure


ENSG00000227033
163232995326 232995353 + PIR31239
Exon structure




164232825955 233209060 + DIS3L2
Exon structure
Hs.732236 129563 ENSG00000144535 DIS3 like 3'-5' exoribonuclease 2
165233028863 233029213 + GC02P233034



166233037363 233037457 + MIR562
Exon structure

693147 ENSG00000207626 microRNA 562
167233037362 233037457 + GC02P233039



168233207826 233208613 + ENSG00000251485
Exon structure


ENSG00000251485
169233207804 233209423 + LOC730069
Exon structure

730069

170233214464 233216072 - ECEL1P3
Exon structure

260332 ENSG00000230122 endothelin converting enzyme-like 1, pseudogene 3
171233244345 233246384 - ENSG00000224516
Exon structure


ENSG00000224516
172233243244 233247599 + ALPP
Exon structure
Hs.284255 250 ENSG00000163283 alkaline phosphatase, placental
173233250460 233252167 - ECEL1P2
Exon structure
Hs.452575 347694 ENSG00000244280 endothelin converting enzyme-like 1, pseudogene 2
174233271552 233275424 + ALPPL2
Exon structure
Hs.333509 251 ENSG00000163286 alkaline phosphatase, placental-like 2
175233280528 233284526 - LOC100131546
Exon structure

100131546 ENSG00000204121
176233285371 233286171 - ENSG00000237087
Exon structure


ENSG00000237087
177233306744 233312676 + DIS3L2P1
Exon structure

282697 ENSG00000223788 DIS3L2 pseudogene 1
178233320833 233324742 + ALPI
Exon structure
Hs.37009 248 ENSG00000163295 alkaline phosphatase, intestinal
179233325348 233325455 + GC02P233331



180233325348 233325455 + GC02P233332



181233344537 233352538 - ECEL1
Exon structure
Hs.26880 9427 ENSG00000171551 endothelin converting enzyme-like 1
182233385173 233390426 + PRSS56
Exon structure
Hs.570310 646960 ENSG00000237412 protease, serine, 56
183233390703 233401377 + CHRND
Exon structure
Hs.156289 1144 ENSG00000135902 cholinergic receptor, nicotinic, delta (muscle)
184233404437 233411113 + CHRNG
Exon structure
Hs.248101 1146 ENSG00000196811 cholinergic receptor, nicotinic, gamma (muscle)
185233412779 233415226 - TIGD1
Exon structure
Hs.211823 200765 ENSG00000221944 tigger transposable element derived 1
186233414795 233414821 - PIR32753
Exon structure




187233415184 233415283 - MIR5001
Exon structure

100847037 ENSG00000266620 microRNA 5001
188233415384 233423534 + GC02P233415



189233414762 233448354 + EIF4E2
Exon structure
Hs.292026; Hs.743459 9470 ENSG00000135930 eukaryotic translation initiation factor 4E family member 2
190233431654 233434543 + GC02P233431



191233438431 233448354 + GC02P233441



192233447235 233447262 + PIR51534
Exon structure




193233445658 233476681 - ENSG00000237126
Exon structure


ENSG00000237126
194233470767 233547491 + EFHD1
Exon structure
Hs.516769 80303 ENSG00000115468 EF-hand domain family, member D1
195233514559 233514845 + RN7SL359P
Exon structure

hugo1129 ENSG00000244384 RNA, 7SL, cytoplasmic 359, pseudogene
196233518687 233518721 - GC02M233518



197233543673 233543775 + ENSG00000239170
Exon structure


ENSG00000239170
198233562009 233601358 + GC02P233563



199233593258 233595607 + GC02P233597



200233594188 233594967 - LOC100421756
Exon structure

100421756 ENSG00000213055
201233624856 233632659 - ENSG00000241409
Exon structure


ENSG00000241409
202233630002 233633107 + GC02P233630



203233630512 233641278 - KCNJ13
Exon structure
Hs.467338 3769 ENSG00000115474 potassium inwardly-rectifying channel, subfamily J, member 13
204233562009 233725287 + GIGYF2
Exon structure
Hs.565319 26058 ENSG00000204120 GRB10 interacting GYF protein 2
205233647375 233647476 + ENSG00000252452
Exon structure


ENSG00000252452
206233671324 233680619 + GC02P233671



207233693362 233693459 + GC02P233697



208233693363 233693461 + ENSG00000199781
Exon structure


ENSG00000199781
209233697581 233709254 + GC02P233698



210233721980 233743418 + C2orf82
Exon structure
Hs.657509 389084 ENSG00000182600 chromosome 2 open reading frame 82
211233737335 233737363 + PIR45244
Exon structure




212233740320 233743418 + GC02P233740



213233743396 233877982 - NGEF
Exon structure
Hs.97316 25791 ENSG00000066248 neuronal guanine nucleotide exchange factor
214233828294 233828328 - GC02M233828



215233877324 233880595 + ENSG00000222001
Exon structure


ENSG00000222001
216233897382 233899767 + NEU2
Exon structure
Hs.532681 4759 ENSG00000115488 sialidase 2 (cytosolic sialidase)
217233933448 233933537 + GC02P233938



218233980561 233982377 - GC02M233980



219233924677 234116549 + INPP5D
Exon structure
Hs.601911; Hs.262886 3635 ENSG00000168918 inositol polyphosphate-5-phosphatase, 145kDa
220234070435 234077975 + GC02P234070



221234113845 234114121 + RN7SL32P
Exon structure

hugo1097 ENSG00000263941 RNA, 7SL, cytoplasmic 32, pseudogene
222234118697 234204320 + ATG16L1
Exon structure
Hs.529322 55054 ENSG00000085978 autophagy related 16-like 1 (S. cerevisiae)
223234184372 234184401 + PIR59383
Exon structure




224234184372 234184401 + GC02P234270



225234184371 234184649 + GC02P234261



226234184372 234184649 + SCARNA5
Exon structure
Hs.663619 677775 ENSG00000252010 small Cajal body-specific RNA 5
227234182950 234191641 + GC02P234182



228234197321 234197587 + GC02P234262



229234197322 234197587 + SCARNA6
Exon structure
Hs.689637 677772 ENSG00000251791 small Cajal body-specific RNA 6
230234197554 234197584 + PIR49212
Exon structure




231234197554 234197584 + GC02P234258



232234205814 234206210 - GC02M234205



233234207098 234207584 + GC02P234259



234234216461 234227414 + GC02P234264



235234216488 234231615 + GC02P234269



236234216524 234231615 + GC02P234268



237234216463 234237259 + GC02P234271



238234216309 234255701 + SAG
Exon structure
Hs.32721 6295 ENSG00000130561 S-antigen; retina and pineal gland (arrestin)
239234243362 234249120 + GC02P234266



240234252334 234255701 + GC02P234267



241234259778 234262062 - ENSG00000259793
Exon structure


ENSG00000259793
242234263220 234301045 + ENSG00000243637
Exon structure


ENSG00000243637
243234288489 234288601 - ENSG00000201013
Exon structure


ENSG00000201013
244234288490 234288601 - GC02M234291



245234263153 234380750 + DGKD
Exon structure
Hs.471675 8527 ENSG00000077044 diacylglycerol kinase, delta 130kDa
246234356347 234357818 + GC02P234356



247234366885 234368513 + GC02P234375



248234367865 234367892 + PIR59405
Exon structure




249234370672 234372610 - GC02M234371



250234371866 234375796 + GC02P234374



251234377028 234377058 - PIR47457
Exon structure




252234377028 234377058 - GC02M234381