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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 2

   GeneLoc map region (173,612,320 - 177,629,200 bp) around gene/marker "CHRNA1"

   Explanation:
   CHRNA1 is located at 175,612,320-175,629,200 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
1173758491 173759111 - ALDH7A1P2
Exon structure

542 ENSG00000232292 aldehyde dehydrogenase 7 family, member A1 pseudogene 2
2173600002 173917621 + RAPGEF4
Exon structure
Hs.470646 11069 ENSG00000091428 Rap guanine nucleotide exchange factor (GEF) 4
3173724766 173832044 + GC02P173724



4173912856 173916682 + GC02P173912



5173914862 173915102 + GC02P173917



6173926460 173926540 + ENSG00000265709
Exon structure


ENSG00000265709
7173940163 174132738 + ZAK
Exon structure
Hs.444451 51776 ENSG00000091436 Sterile alpha motif and leucine zipper containing kinase AZK (est)
8174085958 174085985 + PIR34994
Exon structure




9174031174 174146764 - MLK7-AS1
Exon structure
Hs.570083 339751 ENSG00000238133 MLK7 antisense RNA 1
10174146997 174147029 + GC02P174146



11174162338 174163282 + RPS2P18
Exon structure

643960 ENSG00000231735 ribosomal protein S2 pseudogene 18
12174202947 174220936 - LOC100289479
Exon structure

100289479 ENSG00000236391
13174219548 174233725 + CDCA7
Exon structure
Hs.470654 83879 ENSG00000144354 cell division cycle associated 7
14174223235 174230244 + GC02P174223



15174296077 174296997 - LOC100130171
Exon structure

100130171 ENSG00000213148
16174342724 174343128 - LOC100131562
Exon structure

100131562 ENSG00000236832
17174350387 174351132 - LOC643997
Exon structure

643997 ENSG00000226131
18174356311 174356462 + GC02P174359



19174439838 174441069 - LOC100129456
Exon structure

100129456 ENSG00000237016
20174446361 174446509 + GC02P174449



21174466440 174466467 + PIR59747
Exon structure




22174520834 174524780 - GC02M174520



23174570676 174570876 - ENSG00000237617
Exon structure


ENSG00000237617
24174675804 174676120 + ENSG00000270460
Exon structure


ENSG00000270460
25174736300 174737295 - RPL5P7
Exon structure

344178 ENSG00000234415 ribosomal protein L5 pseudogene 7
26174730621 174755881 + GC02P174734



27174745593 174764156 - ENSG00000224638
Exon structure


ENSG00000224638
28174773925 174774173 - GC02M174777



29174776574 174777086 + GC02P174777



30174773260 174781560 - GC02M174778



31174771187 174830430 - SP3
Exon structure
Hs.531587 6670 ENSG00000172845 Sp3 transcription factor
32174820903 174829252 - GC02M174829



33174820903 174829252 - GC02M174830



34174820545 174830038 - GC02M174835



35174831632 174834142 - GC02M174834



36174833079 174834146 + ENSG00000271151
Exon structure


ENSG00000271151
37174876584 174877703 - ENSG00000273258
Exon structure


ENSG00000273258
38174890008 174891891 + LOC100128905
Exon structure
Hs.456944 100128905 ENSG00000260868 Uncharacterized LOC100128905 (est)
39174907661 174908682 + RPSAP24
Exon structure

391462 ENSG00000235414 ribosomal protein SA pseudogene 24
40174911289 174911655 - GC02M174915



41174939918 174944079 - GC02M174939



42174971561 174971878 + GC02P174978



43174972077 174972237 + GC02P174977



44175007236 175007404 + GC02P175011



45174937175 175113426 - OLA1
Exon structure
Hs.157351 29789 ENSG00000138430 Obg-like ATPase 1
46175036619 175037453 + ENSG00000270799
Exon structure


ENSG00000270799
47175072577 175072599 - GC02M175072



48175104870 175105146 - RN7SL65P
Exon structure

hugo1457 ENSG00000243770 RNA, 7SL, cytoplasmic 65, pseudogene
49175129606 175129709 - ENSG00000201088
Exon structure


ENSG00000201088
50175129607 175129709 - GC02M175135



51175164052 175165684 - LOC644158
Exon structure

644158 ENSG00000227180
52175174743 175175702 - HNRNPA1P39
Exon structure

402112 ENSG00000237804 heterogeneous nuclear ribonucleoprotein A1 pseudogene 39
53175190755 175195371 + AC018470.4
Exon structure
Hs.275398 285084 ENSG00000231453 Uncharacterized LOC285084 (est)
54175197325 175198448 - GC02M175202



55175200601 175202151 - ENSG00000268241
Exon structure


ENSG00000268241
56175199674 175203220 + SP9
Exon structure
Hs.516603 100131390 ENSG00000217236 Sp9 transcription factor
57175207510 175207827 + GC02P175210



58175213863 175216691 - GC02M175213



59175212750 175260443 - CIR1
Exon structure
Hs.632531 9541 ENSG00000138433 corepressor interacting with RBPJ, 1
60175251991 175260437 - GC02M175251



61175260523 175262132 + GC02P175261



62175276660 175276677 + GC02P175276



63175260457 175294303 + SCRN3
Exon structure
Hs.470679 79634 ENSG00000144306 secernin 3
64175274765 175293587 + GC02P175275



65175301034 175310150 - GC02M175301



66175296375 175351822 - GPR155
Exon structure
Hs.516604 151556 ENSG00000163328 G protein-coupled receptor 155
67175347601 175351728 - GC02M175347



68175352063 175353137 + GC02P175353



69175352117 175353114 + ENSG00000226853
Exon structure


ENSG00000226853
70175354350 175354756 - GC02M175354



71175355826 175356920 + GC02P175355



72175366680 175367043 + LOC442058
Exon structure

442058 ENSG00000179997
73175410028 175411063 - GC02M175410



74175420225 175421672 + GC02P175420



75175422694 175422800 - RNU6-5P
Exon structure

hugo2926 ENSG00000206965 RNA, U6 small nuclear 5, pseudogene
76175430943 175430994 - GC02M175434



77175430945 175431006 - RNU7-44P
Exon structure

100147831
RNA, U7 small nuclear 44 pseudogene
78175431805 175435374 - GC02M175435



79175439955 175452454 + ENSG00000237798
Exon structure


ENSG00000237798
80175445868 175462532 - GC02M175445



81175424300 175547644 - WIPF1
Exon structure
Hs.128067 7456 ENSG00000115935 WAS/WASL interacting protein family, member 1
82175488209 175499333 - GC02M175488



83175411869 175639555 + ENSG00000236449
Exon structure


ENSG00000236449
84175537995 175547644 - GC02M175537



85175584505 175585586 + H3F3AP4
Exon structure

440926 ENSG00000235655 H3 histone, family 3A, pseudogene 4
86175612320 175629200 - CHRNA1
Exon structure
Hs.434479 1134 ENSG00000138435 cholinergic receptor, nicotinic, alpha 1 (muscle)
87175622369 175624330 - GC02M175632



88175622369 175624330 - GC02M175631



89175622371 175624330 - GC02M175633



90175647774 175652656 - ENSG00000237104
Exon structure


ENSG00000237104
91175653713 175653745 - GC02M175654



92175664625 175666785 - GC02M175665



93175664042 175870107 - CHN1
Exon structure
Hs.380138 1123 ENSG00000128656 chimerin 1
94175675628 175869947 - GC02M175675



95175842530 175842623 + GC02P175845



96175842531 175842625 + ENSG00000201425
Exon structure


ENSG00000201425
97175870117 175873192 + GC02P175870



98175886942 175887047 + ENSG00000212167
Exon structure


ENSG00000212167
99175886947 175887047 + GC02P175890



100175894496 175894605 + GC02P175898



101175894497 175894605 + ENSG00000199827
Exon structure


ENSG00000199827
102175898464 175898962 - RPL21P31
Exon structure

100271160 ENSG00000227187 ribosomal protein L21 pseudogene 31
103175898506 175898920 - GC02M175901



104175899245 175899318 - ENSG00000266510
Exon structure


ENSG00000266510
105175916587 175925699 - GC02M175919



106175936980 175938772 - GC02M175940



107175944991 175957982 - GC02M175944



108175936978 176033110 - ATF2
Exon structure
Hs.592510 1386 ENSG00000115966 activating transcription factor 2
109175991521 176033110 - GC02M175991



110176032361 176032437 - MIR933
Exon structure

100126350 ENSG00000215973 microRNA 933
111176032632 176033250 + ENSG00000229750
Exon structure


ENSG00000229750
112176041227 176041318 - ENSG00000200121
Exon structure


ENSG00000200121
113176041228 176041318 - GC02M176054



114176042871 176044905 - GC02M176056



115176043018 176046121 - GC02M176055



116176043020 176046423 - GC02M176057



117176040986 176049335 - ATP5G3
Exon structure
Hs.429 518 ENSG00000154518 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
118176045755 176045783 - PIR53455
Exon structure




119176047420 176048342 + GC02P176057



120176048937 176049383 + RPS15AP14
Exon structure

100127924 ENSG00000233131 ribosomal protein S15a pseudogene 14
121176129394 176129509 + GC02P176132



122176195101 176195200 + ENSG00000221347
Exon structure


ENSG00000221347
123176121978 176319368 + ENSG00000229066
Exon structure


ENSG00000229066
124176305485 176305644 + GC02P176307



125176366972 176367000 + PIR53550
Exon structure




126176417784 176417946 + GC02P176420



127176428565 176428865 + GC02P176431



128176549792 176549822 + PIR35160
Exon structure




129176549792 176549822 + GC02P176551



130176552020 176552049 + PIR60891
Exon structure




131176669410 176669669 + GC02P176674



132176707615 176708030 + EXTL2P1
Exon structure

100287682 ENSG00000223976 exostoses (multiple)-like 2 pseudogene 1
133176718701 176718829 + GC02P176721



134176748704 176749791 - GC02M176751



135176754835 176754969 + GC02P176757



136176762064 176768960 + ENSG00000235047
Exon structure


ENSG00000235047
137176769099 176770230 - ENSG00000229779
Exon structure


ENSG00000229779
138176802206 176804482 - GC02M176802



139176788620 176867567 - KIAA1715
Exon structure
Hs.209561 80856 ENSG00000144320 KIAA1715
140176856959 176867514 - GC02M176856



141176867126 176882169 + GC02P176867



142176885000 176885201 - GC02M176885



143176942200 176948690 - EVX2
Exon structure
Hs.452341 344191 ENSG00000174279 even-skipped homeobox 2
144176957532 176960666 + HOXD13
Exon structure
Hs.152414 3239 ENSG00000128714 homeobox D13
145176964458 176966408 + HOXD12
Exon structure
Hs.450028 3238 ENSG00000170178 homeobox D12
146176968944 176974722 + HOXD11
Exon structure
Hs.421136 3237 ENSG00000128713 homeobox D11
147176973371 176973458 + ENSG00000216193
Exon structure


ENSG00000216193
148176968944 176984122 + GC02P176968



149176973518 176984670 + HOXD10
Exon structure
Hs.123070 3236 ENSG00000128710 homeobox D10
150176987088 176989853 + HOXD9
Exon structure
Hs.236646 3235 ENSG00000128709 homeobox D9
151176992555 176993195 - GC02M177003



152176986339 177001826 - HOXD-AS2
Exon structure
Hs.667234 100506783 ENSG00000237380 HOXD cluster antisense RNA 2
153176994422 176997423 + HOXD8
Exon structure
Hs.301963 3234 ENSG00000175879 homeobox D8
154177001340 177005118 + GC02P177005



155177006206 177006278 + GC02P177010



156177015030 177015140 + GC02P177035



157177015031 177015140 + MIR10B
Exon structure

406903 ENSG00000207744 microRNA 10b
158177015043 177015140 + GC02P177036



159177015256 177015283 + PIR51248
Exon structure




160177015950 177017954 + HOXD4
Exon structure
Hs.591609 3233 ENSG00000170166 homeobox D4
161177001340 177037830 + HOXD3
Exon structure
Hs.93574 3232 ENSG00000128652 homeobox D3
162177028892 177030444 - ENSG00000272729
Exon structure


ENSG00000272729
163177042445 177043736 + ENSG00000226363
Exon structure


ENSG00000226363
164177037923 177053686 - HOXD-AS1
Exon structure
Hs.98661 401022 ENSG00000224189 HOXD cluster antisense RNA 1
165177053307 177055688 + HOXD1
Exon structure
Hs.83465 3231 ENSG00000128645 homeobox D1
166177054646 177057266 - GC02M177058



167177065636 177065980 - GC02M177067



168177065579 177066113 - RPLP1P4
Exon structure

100129028 ENSG00000218175 ribosomal protein, large, P1 pseudogene 4
169177086426 177090951 - GC02M177087



170177106763 177107798 + RPSAP25
Exon structure

129841 ENSG00000230384 ribosomal protein SA pseudogene 25
171177134123 177202753 + MTX2
Exon structure
Hs.470728 10651 ENSG00000128654 metaxin 2
172177203365 177203805 + ENSG00000237260
Exon structure


ENSG00000237260
173177246960 177247060 - ENSG00000265186
Exon structure


ENSG00000265186
174177248155 177248304 - ENSG00000221304
Exon structure


ENSG00000221304
175177370973 177372430 - ENSG00000229434
Exon structure


ENSG00000229434
176177389607 177396411 - ENSG00000236231
Exon structure


ENSG00000236231
177177362438 177454492 + GC02P177362



178177465708 177465780 - MIR1246
Exon structure

100302142
microRNA 1246
179177476165 177476977 - ENSG00000272551
Exon structure


ENSG00000272551
180177494309 177502659 - LINC01116
Exon structure
Hs.636452 375295 ENSG00000163364 long intergenic non-protein coding RNA 1116
181177502438 177520686 + ENSG00000224577
Exon structure


ENSG00000224577
182177529404 177529494 + RNU6ATAC14P
Exon structure

hugo3356 ENSG00000252027 RNA, U6atac small nuclear 14, pseudogene
183177529403 177529494 + GC02P177532



184177588996 177684038 - LOC101930299
Exon structure

101930299 ENSG00000230552
185177588996 177684038 - LOC101929963
Exon structure

101929963 ENSG00000230552