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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 17

   GeneLoc map region (68,117,161 - 72,122,561 bp) around gene/marker "SOX9"

   Explanation:
   SOX9 is located at 70,117,161-70,122,561 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
168013465 68125000 - ENSG00000230258
Exon structure


ENSG00000230258
268049570 68131749 + KCNJ16
Exon structure
Hs.463985 3773 ENSG00000153822 potassium inwardly-rectifying channel, subfamily J, member 16
368147095 68154278 - GC17M068147



468160284 68165543 - GC17M068160



568163102 68165543 - KCNJ2-AS1
Exon structure
Hs.225661 400617 ENSG00000267365 KCNJ2 antisense RNA 1 (head to head)
668164814 68176189 + KCNJ2
Exon structure
Hs.1547 3759 ENSG00000123700 potassium inwardly-rectifying channel, subfamily J, member 2
768193613 68222645 - GC17M068193



868237410 68238524 + CALM2P1
Exon structure

100128390 ENSG00000267170 calmodulin 2 pseudogene 1
968308972 68365057 - ENSG00000267109
Exon structure


ENSG00000267109
1068573372 68573400 + PIR37193
Exon structure




1168573936 68573974 - GC17M068574



1268625058 68625406 - ENSG00000267471
Exon structure


ENSG00000267471
1368772620 68775376 + GC17P068772



1468774745 68775371 - ENSG00000271239
Exon structure


ENSG00000271239
1568873970 68875163 + GC17P068873



1668877214 68879710 + GC17P068877



1768884336 68884918 - GC17M068887



1868896839 68916705 + GC17P068899



1969008138 69009730 + LOC100131241
Exon structure

100131241 ENSG00000271101
2069077407 69090079 + GC17P069077



2169093916 69198318 - CASC17
Exon structure

101928165 ENSG00000260785 cancer susceptibility candidate 17 (non-protein coding)
2269151341 69151372 - GC17M069151



2369294297 69294359 - RNU7-155P
Exon structure

hugo3438 ENSG00000238759 RNA, U7 small nuclear 155 pseudogene
2469307309 69307383 + ENSG00000222563
Exon structure


ENSG00000222563
2569310103 69310124 + GC17P069313



2669592479 69593420 + ENSG00000225818
Exon structure


ENSG00000225818
2769617119 69617577 + LOC124685
Exon structure

124685 ENSG00000228118
2869887679 69887917 + GC17P069890



2970002453 70002483 + PIR55106
Exon structure




3070002453 70002483 + GC17P070004



3170017992 70030233 - ENSG00000228639
Exon structure


ENSG00000228639
3270026432 70034889 + LINC01152
Exon structure

102606463 ENSG00000256124 long intergenic non-protein coding RNA 1152
3370036164 70036872 + ENSG00000267893
Exon structure


ENSG00000267893
3470030248 70053871 - ENSG00000254148
Exon structure


ENSG00000254148
3570068474 70089622 + AC007461.2
Exon structure

101928205 ENSG00000226101
3670017992 70216859 - GC17M070019



3770117852 70117873 + GC17P070121



3870117161 70122561 + SOX9
Exon structure
Hs.647409 6662 ENSG00000125398 SRY (sex determining region Y)-box 9
3970033455 70217977 - SOX9-AS1
Exon structure
Hs.657374 400618 ENSG00000234899 SOX9 antisense RNA 1
4070215782 70216027 + GC17P070217



4170217271 70217977 - GC17M070217



4270338863 70339060 + GC17P070343



4370339081 70351277 + RP11-1124B17.1
Exon structure
Hs.651743 146795 ENSG00000264026 Uncharacterized LOC146795 (est)
4470419592 70424962 + GC17P070423



4570422080 70424993 + ENSG00000263680
Exon structure


ENSG00000263680
4670319264 70636611 - LINC00511
Exon structure
Hs.447555 400619 ENSG00000227036 long intergenic non-protein coding RNA 511
4770399463 70588943 - LINC00673
Exon structure
Hs.157726 100499467
long intergenic non-protein coding RNA 673
4870427269 70588931 + GC17P070430



4970623370 70623763 + RPL32P33
Exon structure

100271493 ENSG00000243514 ribosomal protein L32 pseudogene 33
5070634697 70634735 - GC17M070634



5170638870 70640629 + ENSG00000263893
Exon structure


ENSG00000263893
5270659962 70660291 - RN7SKP180
Exon structure

hugo646 ENSG00000200783 RNA, 7SK small nuclear pseudogene 180
5370659986 70660291 - GC17M070663



5470710522 70710610 - ENSG00000222545
Exon structure


ENSG00000222545
5570814975 70815111 - ENSG00000252274
Exon structure


ENSG00000252274
5670814974 70815111 - GC17M070818



5770835178 70835857 + ENSG00000264196
Exon structure


ENSG00000264196
5870642085 71088853 - SLC39A11
Exon structure
Hs.221127 201266 ENSG00000133195 solute carrier family 39, member 11
5971063684 71064442 - ATG12P1
Exon structure

100151642 ENSG00000266501 autophagy related 12 pseudogene 1
6071064009 71064427 - GC17M071066



6171068408 71088849 - GC17M071068



6271158909 71159523 - POLR3KP2
Exon structure

390811 ENSG00000265469 polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa pseudogene 2
6371159174 71159498 - GC17M071160



6471161151 71168094 + SSTR2
Exon structure
Hs.514451 6752 ENSG00000180616 somatostatin receptor 2
6571164724 71175048 - GC17M071164



6671171622 71172772 + ENSG00000260248
Exon structure


ENSG00000260248
6771161116 71192732 + ENSG00000264860
Exon structure


ENSG00000264860
6871189129 71204646 + COG1
Exon structure
Hs.103555 9382 ENSG00000166685 component of oligomeric golgi complex 1
6971203873 71203903 - GC17M071206



7071203873 71203903 - PIR44468
Exon structure




7171203492 71232892 - FAM104A
Exon structure
Hs.741276 84923 ENSG00000133193 family with sequence similarity 104, member A
7271228372 71245098 + C17orf80
Exon structure
Hs.12929 55028 ENSG00000141219 chromosome 17 open reading frame 80
7371239232 71240845 + ENSG00000265010
Exon structure


ENSG00000265010
7471244588 71258491 - CPSF4L
Exon structure
Hs.534707 642843 ENSG00000187959 cleavage and polyadenylation specific factor 4-like
7571272639 71274712 + GC17P071276



7671277760 71278538 + GC17P071277



7771279763 71308314 - CDC42EP4
Exon structure
Hs.3903 23580 ENSG00000179604 CDC42 effector protein (Rho GTPase binding) 4
7871282657 71306337 - GC17M071282



7971307193 71308144 - GC17M071307



8071331043 71331139 + GC17P071334



8171389832 71389858 - PIR43433
Exon structure




8271330523 71640228 - SDK2
Exon structure
Hs.435719 54549 ENSG00000069188 sidekick cell adhesion molecule 2
8371500479 71503733 - GC17M071500



8471509824 71514909 + LOC101928251
Exon structure

101928251 ENSG00000264985
8571515985 71517546 + ENSG00000265780
Exon structure


ENSG00000265780
8671529959 71530149 + GC17P071532



8771544055 71544088 + GC17P071544



8871637165 71639245 + ENSG00000264750
Exon structure


ENSG00000264750
8971658707 71659987 - ENSG00000265935
Exon structure


ENSG00000265935
9071661416 71661650 + GC17P071665



9171692139 71693134 - GC17M071692



9271729326 71744748 - GC17M071729



9371733993 71752696 + LOC100134391
Exon structure
Hs.694655 100134391 ENSG00000263574 Uncharacterized LOC100134391 (est)
9471745409 71824676 - LINC00469
Exon structure
Hs.464079 283982 ENSG00000177338 long intergenic non-protein coding RNA 469
9571782941 71796934 + AC125421.1
Exon structure
Hs.348644 400620 ENSG00000234721 Uncharacterized LOC400620 (est)
9671827711 71832158 - ENSG00000265927
Exon structure


ENSG00000265927
9771890888 71908017 - ENSG00000266765
Exon structure


ENSG00000266765
9871908271 71911948 + GC17P071911



9971940479 71945993 - GC17M071943



10072042314 72042342 - PIR58742
Exon structure




10172050499 72050526 - PIR47402
Exon structure




10272054538 72054564 - PIR46566
Exon structure




10372059493 72059519 - PIR43564
Exon structure




10472061178 72061204 - PIR52700
Exon structure




10572062702 72062728 - PIR48564
Exon structure




10672066301 72066328 - PIR37133
Exon structure




10772069975 72070003 - PIR42350
Exon structure




10872082403 72082431 - PIR48752
Exon structure




10972084102 72084128 - PIR40612
Exon structure




11072086137 72086163 - PIR51734
Exon structure




11172039591 72150351 - ENSG00000266357
Exon structure


ENSG00000266357