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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 17

   GeneLoc map region (39,196,312 - 43,277,500 bp) around gene/marker "BRCA1"

   Explanation:
   BRCA1 is located at 41,196,312-41,277,500 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
139196811 39197713 - KRTAP1-1
Exon structure
Hs.247934 81851 ENSG00000188581 keratin associated protein 1-1
239202793 39203568 - KRTAP2-1
Exon structure
Hs.528921 81872 ENSG00000212725 keratin associated protein 2-1
339210750 39211482 - KRTAP2-2
Exon structure
Hs.650131 728279 ENSG00000214518 keratin associated protein 2-2
439215492 39216344 - KRTAP2-3
Exon structure
Hs.406714 730755 ENSG00000212724 keratin associated protein 2-3
539221368 39222131 - KRTAP2-4
Exon structure
Hs.560502 85294 ENSG00000213417 keratin associated protein 2-4
639228198 39228598 + KRTAP2-5P
Exon structure

85343 ENSG00000237230 keratin associated protein 2-5, pseudogene
739240459 39241396 + KRTAP4-7
Exon structure
Hs.632746 100132476 ENSG00000240871 keratin associated protein 4-7
839253218 39254123 - GC17M039256



939253233 39254393 - KRTAP4-8
Exon structure
Hs.307019 728224 ENSG00000204880 keratin associated protein 4-8
1039257654 39258561 - KRTAP4-16P
Exon structure

85354 ENSG00000241241 keratin associated protein 4-16, pseudogene
1139261584 39262740 + KRTAP4-9
Exon structure
Hs.307018 100132386 ENSG00000212722 keratin associated protein 4-9
1239273433 39274606 - KRTAP4-11
Exon structure
Hs.307015 653240 ENSG00000212721 keratin associated protein 4-11
1339279343 39280419 - KRTAP4-12
Exon structure
Hs.572443 83755 ENSG00000213416 keratin associated protein 4-12
1439295685 39296739 - KRTAP4-6
Exon structure
Hs.307014 81871 ENSG00000198090 keratin associated protein 4-6
1539305176 39306054 - KRTAP4-5
Exon structure
Hs.514863 85289 ENSG00000198271 keratin associated protein 4-5
1639315905 39316983 - KRTAP4-4
Exon structure
Hs.307022 84616 ENSG00000171396 keratin associated protein 4-4
1739323483 39324424 - KRTAP4-3
Exon structure
Hs.307023 85290 ENSG00000196156 keratin associated protein 4-3
1839333698 39334460 - KRTAP4-2
Exon structure
Hs.380165 85291 ENSG00000244537 keratin associated protein 4-2
1939340352 39341594 - KRTAP4-1
Exon structure
Hs.437079 85285 ENSG00000198443 keratin associated protein 4-1
2039343196 39343388 - ENSG00000251439
Exon structure


ENSG00000251439
2139344697 39346891 + KRTAP9-1
Exon structure
Hs.727478 728318 ENSG00000240542 keratin associated protein 9-1
2239368958 39369668 + KRTAP9-12P
Exon structure

100287715 ENSG00000248807 keratin associated protein 9-12, pseudogene
2339382907 39383481 + GC17P039386



2439382900 39383904 + KRTAP9-2
Exon structure
Hs.307013 83899 ENSG00000239886 keratin associated protein 9-2
2539388715 39389706 + KRTAP9-3
Exon structure
Hs.307012 83900 ENSG00000204873 keratin associated protein 9-3
2639394270 39395256 + KRTAP9-8
Exon structure
Hs.307011 83901 ENSG00000187272 keratin associated protein 9-8
2739405939 39406905 + KRTAP9-4
Exon structure
Hs.528700 85280 ENSG00000241595 keratin associated protein 9-4
2839411636 39412616 + KRTAP9-9
Exon structure
Hs.722077 81870 ENSG00000198083 keratin associated protein 9-9
2939421591 39422893 + KRTAP9-6
Exon structure

100507608 ENSG00000212659 keratin associated protein 9-6
3039427563 39428087 + KRTAP9-11P
Exon structure

85347 ENSG00000229351 keratin associated protein 9-11, pseudogene
3139431911 39432949 + KRTAP9-7
Exon structure

100505724 ENSG00000180386 keratin associated protein 9-7
3239436856 39437062 + ENSG00000237183
Exon structure


ENSG00000237183
3339458078 39459103 - KRTAP29-1
Exon structure
Hs.744833 100533177 ENSG00000212658 keratin associated protein 29-1
3439463952 39465505 - KRTAP16-1
Exon structure
Hs.721600 100505753 ENSG00000212657 keratin associated protein 16-1
3539471169 39471947 - KRTAP17-1
Exon structure
Hs.307009 83902 ENSG00000186860 keratin associated protein 17-1
3639479679 39485797 + ENSG00000233014
Exon structure


ENSG00000233014
3739490884 39491985 + ENSG00000108516
Exon structure


ENSG00000108516
3839502344 39507064 - KRT33A
Exon structure
Hs.512579 3883 ENSG00000006059 keratin 33A
3939519746 39526052 - KRT33B
Exon structure
Hs.32950 3884 ENSG00000131738 keratin 33B
4039533902 39538655 - KRT34
Exon structure
Hs.296942 3885 ENSG00000131737 keratin 34
4139549976 39553844 - KRT31
Exon structure
Hs.41696 3881 ENSG00000094796 keratin 31
4239555844 39555947 + GC17P039557



4339562291 39568951 - KRT41P
Exon structure

8686 ENSG00000225438 keratin 41 pseudogene
4439558668 39581301 + AC003958.2
Exon structure
Hs.463024 100505782 ENSG00000234859 Uncharacterized LOC100505782 (est)
4539558668 39581301 + GC17P039562



4639576809 39580822 - KRT37
Exon structure
Hs.673852 8688 ENSG00000108417 keratin 37
4739592621 39597596 - KRT38
Exon structure
Hs.248188 8687 ENSG00000171360 keratin 38
4839604435 39610307 - KRT43P
Exon structure

100418861 ENSG00000236473 keratin 43, pseudogene
4939615765 39623681 - KRT32
Exon structure
Hs.41752 3882 ENSG00000108759 keratin 32
5039624208 39624398 + ENSG00000223125
Exon structure


ENSG00000223125
5139632941 39637392 - KRT35
Exon structure
Hs.73082 3886 ENSG00000197079 keratin 35
5239642388 39648798 - KRT36
Exon structure
Hs.248189 8689 ENSG00000126337 keratin 36
5339657234 39658163 - GC17M039658



5439657235 39658661 + ENSG00000229732
Exon structure


ENSG00000229732
5539657233 39661957 - KRT13
Exon structure
Hs.654550 3860 ENSG00000171401 keratin 13
5639659911 39660828 - GC17M039662



5739670009 39671006 - GC17M039677



5839669995 39678781 - KRT15
Exon structure
Hs.654570 3866 ENSG00000171346 keratin 15
5939681230 39681924 - GC17M039685



6039679869 39684641 - KRT19
Exon structure
Hs.654568 3880 ENSG00000171345 keratin 19
6139705858 39710747 - LINC00974
Exon structure
Hs.680576 147093 ENSG00000226629 long intergenic non-protein coding RNA 974
6239722093 39728310 - KRT9
Exon structure
Hs.654569 3857 ENSG00000171403 keratin 9
6339738561 39739707 - GC17M039739



6439738531 39743173 - KRT14
Exon structure
Hs.654380 3861 ENSG00000186847 keratin 14
6539766030 39772151 - KRT16
Exon structure
Hs.655160 3868 ENSG00000186832 keratin 16
6639777050 39777101 - GC17M039800



6739775689 39781094 - KRT17
Exon structure
Hs.2785 3872 ENSG00000128422 keratin 17
6839779212 39779263 - GC17M039803



6939780410 39780461 - GC17M039799



7039784202 39785018 - GC17M039801



7139786729 39791926 - GC17M039802



7239782579 39796451 - KRT42P
Exon structure
Hs.725790 284116 ENSG00000214514 keratin 42 pseudogene
7339821818 39824283 + GC17P039826



7439845127 39848920 + EIF1
Exon structure
Hs.150580 10209 ENSG00000173812 eukaryotic translation initiation factor 1
7539847466 39847896 + GC17P039855



7639847466 39847896 + GC17P039856



7739775692 39943183 - JUP
Exon structure
Hs.514174 3728 ENSG00000173801 junction plakoglobin
7839868578 39872221 + GAST
Exon structure
Hs.2681 2520 ENSG00000184502 gastrin
7939874406 39874512 + RNA5SP442
Exon structure

hugo1767 ENSG00000201920 RNA, 5S ribosomal pseudogene 442
8039874414 39874504 + GC17P039880



8139873994 39890898 - HAP1
Exon structure
Hs.158300 9001 ENSG00000173805 huntingtin-associated protein 1
8239886381 39886657 - RN7SL399P
Exon structure

hugo1173 ENSG00000239542 RNA, 7SL, cytoplasmic 399, pseudogene
8339943861 39943888 + PIR32942
Exon structure




8439958199 39968856 - LEPREL4
Exon structure
Hs.446459 10609 ENSG00000141696 leprecan-like 4
8539963077 39967412 - GC17M039963



8639967428 39967454 - PIR33798
Exon structure




8739967443 39967918 - GC17M039972



8839968932 39979469 + FKBP10
Exon structure
Hs.463035 60681 ENSG00000141756 FK506 binding protein 10, 65 kDa
8939975122 39975829 + GC17P039975



9039981334 39992523 - NT5C3B
Exon structure
Hs.237536 115024 ENSG00000141698 5'-nucleotidase, cytosolic IIIB
9139985157 39992455 - GC17M039985



9239993316 39993580 - RN7SL871P
Exon structure

hugo1689 ENSG00000263830 RNA, 7SL, cytoplasmic 871, pseudogene
9339991937 40004636 + KLHL10
Exon structure
Hs.127510 317719 ENSG00000161594 kelch-like family member 10
9440004770 40007699 - ENSG00000259623
Exon structure


ENSG00000259623
9540009797 40021684 - KLHL11
Exon structure
Hs.592134 55175 ENSG00000178502 kelch-like family member 11
9640021808 40024161 + GC17P040021



9740031748 40031780 - GC17M040034



9840032122 40032150 + GC17P040034



9940032161 40032192 + GC17P040032



10040032231 40032266 + GC17P040033



10140054919 40054951 - PIR36467
Exon structure




10240054919 40054951 - GC17M040056



10340023161 40086795 - ACLY
Exon structure
Hs.387567 47 ENSG00000131473 ATP citrate lyase
10440060693 40061894 - GC17M040060



10540075274 40080090 + GC17P040075



10640085198 40086887 - GC17M040085



10740091551 40093294 + GC17P040091



10840086888 40117669 + TTC25
Exon structure
Hs.201134 83538 ENSG00000204815 tetratricopeptide repeat domain 25
10940118813 40120193 + GC17P040119



11040120085 40120148 + GC17P040128



11140120085 40120148 + GC17P040132



11240120444 40120470 + PIR42788
Exon structure




11340122299 40123815 + GC17P040130



11440118759 40129754 + CNP
Exon structure
Hs.273621 1267 ENSG00000173786 2',3'-cyclic nucleotide 3' phosphodiesterase
11540127182 40129749 + GC17P040131



11640136324 40138085 - GC17M040136



11740139455 40140840 - GC17M040140



11840141439 40144800 - GC17M040141



11940128439 40173394 - DNAJC7
Exon structure
Hs.500156 7266 ENSG00000168259 DnaJ (Hsp40) homolog, subfamily C, member 7
12040152575 40169171 - GC17M040152



12140163400 40177659 + NKIRAS2
Exon structure
Hs.632252 28511 ENSG00000168256 NFKB inhibitor interacting Ras-like 2
12240172120 40174013 + GC17P040172



12340176965 40176993 + PIR51799
Exon structure




12440177594 40180707 - GC17M040178



12540190250 40190752 - ENSG00000270010
Exon structure


ENSG00000270010
12640191723 40195394 - LOC100507656
Exon structure

100507656 ENSG00000267221
12740177594 40217383 - ZNF385C
Exon structure
Hs.443140 201181 ENSG00000187595 zinc finger protein 385C
12840197700 40197726 - PIR44940
Exon structure




12940213257 40217383 - GC17M040213



13040253618 40254827 - GC17M040256



13140253422 40264751 - DHX58
Exon structure
Hs.55918 79132 ENSG00000108771 DEXH (Asp-Glu-X-His) box polypeptide 58
13240264884 40264914 + PIR51780
Exon structure




13340264884 40264914 + GC17P040267



13440267711 40269507 - GC17M040267



13540265126 40273382 - KAT2A
Exon structure
Hs.463045 2648 ENSG00000108773 K(lysine) acetyltransferase 2A
13640271069 40271212 + GC17P040276



13740274756 40275371 + HSPB9
Exon structure
Hs.620611 94086 ENSG00000197723 heat shock protein, alpha-crystallin-related, B9
13840275067 40275093 + PIR31172
Exon structure




13940284188 40284306 + GC17P040288



14040271692 40306934 - ENSG00000267261
Exon structure


ENSG00000267261
14140276994 40307035 - RAB5C
Exon structure
Hs.650382 5878 ENSG00000108774 RAB5C, member RAS oncogene family
14240282179 40307035 - GC17M040282



14340306618 40307990 + ENSG00000267658
Exon structure


ENSG00000267658
14440308909 40333296 - KCNH4
Exon structure
Hs.304081 23415 ENSG00000089558 potassium voltage-gated channel, subfamily H (eag-related), member 4
14540334634 40335001 + GC17P040335



14640335102 40335410 + GC17P040336



14740336078 40337470 - HCRT
Exon structure
Hs.158348 3060 ENSG00000161610 hypocretin (orexin) neuropeptide precursor
14840340817 40346550 - GHDC
Exon structure
Hs.38039 84514 ENSG00000167925 GH3 domain containing
14940344949 40346531 - GC17M040344



15040346647 40348097 + GC17P040351



15140351186 40428725 - STAT5B
Exon structure
Hs.595276 6777 ENSG00000173757 signal transducer and activator of transcription 5B
15240420605 40421825 + ENSG00000267758
Exon structure


ENSG00000267758
15340422535 40424701 - ENSG00000236194
Exon structure


ENSG00000236194
15440441231 40444055 + GC17P040441



15540439565 40463961 + STAT5A
Exon structure
Hs.437058 6776 ENSG00000126561 signal transducer and activator of transcription 5A
15640452743 40452770 + PIR49037
Exon structure




15740466890 40468871 - GC17M040466



15840469231 40475337 - GC17M040472



15940474290 40477079 - GC17M040479



16040465342 40540586 - STAT3
Exon structure
Hs.463059 6774 ENSG00000168610 signal transducer and activator of transcription 3 (acute-phase response factor)
16140538957 40540439 - GC17M040538



16240551027 40551109 + ENSG00000221020
Exon structure


ENSG00000221020
16340554467 40575535 - PTRF
Exon structure
Hs.437191 284119 ENSG00000177469 polymerase I and transcript release factor
16440592216 40592277 - RNU7-97P
Exon structure

hugo3491 ENSG00000238704 RNA, U7 small nuclear 97 pseudogene
16540599263 40601332 + GC17P040599



16640600564 40600596 - GC17M040600



16740600938 40600966 + GC17P040601



16840600977 40601008 + GC17P040600



16940626967 40627084 + GC17P040630



17040610862 40674629 + ATP6V0A1
Exon structure
Hs.463074 535 ENSG00000033627 ATPase, H+ transporting, lysosomal V0 subunit a1
17140642555 40646607 + GC17P040642



17240646791 40646848 + MIR548AT
Exon structure

100847030 ENSG00000264314 microRNA 548at
17340647885 40648568 + ENSG00000267222
Exon structure


ENSG00000267222
17440661802 40663537 + ENSG00000267632
Exon structure


ENSG00000267632
17540663761 40663792 - GC17M040663



17640666206 40666325 + MIR5010
Exon structure

100847046 ENSG00000265611 microRNA 5010
17740669945 40674596 + GC17P040672



17840673736 40674065 + ENSG00000256929
Exon structure


ENSG00000256929
17940684209 40684423 + GC17P040684



18040685151 40686232 + PTP4A2P1
Exon structure

5767 ENSG00000267185 protein tyrosine phosphatase type IVA, member 2 pseudogene 1
18140685550 40686027 + GC17P040686



18240687951 40696467 + NAGLU
Exon structure
Hs.50727 4669 ENSG00000108784 N-acetylglucosaminidase, alpha
18340697797 40700993 + HSD17B1P1
Exon structure

643646 ENSG00000108785 hydroxysteroid (17-beta) dehydrogenase 1 pseudogene 1
18440688528 40714080 + ENSG00000266929
Exon structure


ENSG00000266929
18540701232 40707232 + HSD17B1
Exon structure
Hs.654385; Hs.655222 3292 ENSG00000108786 hydroxysteroid (17-beta) dehydrogenase 1
18640704941 40706069 + GC17P040704



18740704456 40706766 - ENSG00000266962
Exon structure


ENSG00000266962
18840713485 40714287 + GC17P040713



18940713485 40718295 + COASY
Exon structure
Hs.296422 80347 ENSG00000068120 CoA synthase
19040716033 40716689 + GC17P040716



19140717480 40718295 + GC17P040717



19240719117 40721517 + GC17P040722



19340719078 40725257 + MLX
Exon structure
Hs.714749 6945 ENSG00000108788 MLX, MAX dimerization protein
19440722001 40723904 - GC17M040743



19540722003 40723904 - GC17M040744



19640724329 40729849 - PSMC3IP
Exon structure
Hs.383019 29893 ENSG00000131470 PSMC3 interacting protein
19740728695 40729690 - GC17M040745



19840729851 40730931 + GC17P040729



19940731534 40732698 + GC17P040735



20040732477 40732505 - PIR42459
Exon structure




20140737108 40738857 - GC17M040742



20240737139 40738857 - GC17M040746



20340738831 40738858 - PIR51920
Exon structure




20440731526 40762641 - FAM134C
Exon structure
Hs.632262 162427 ENSG00000141699 family with sequence similarity 134, member C
20540750661 40751195 + GC17P040753



20640761336 40761363 - PIR53494
Exon structure




20740761358 40767256 + TUBG1
Exon structure
Hs.279669 7283 ENSG00000131462 tubulin, gamma 1
20840794304 40800819 + HMGB3P27
Exon structure

441795 ENSG00000267132 high mobility group box 3 pseudogene 27
20940799852 40800165 + ATP5LP7
Exon structure

100287964 ENSG00000267189 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit g, pseudogene 7
21040812278 40813409 + GC17P040813



21140811266 40819024 + TUBG2
Exon structure
Hs.708059 27175 ENSG00000037042 tubulin, gamma 2
21240822502 40822528 + PIR45597
Exon structure




21340819932 40829048 - PLEKHH3
Exon structure
Hs.632251 79990 ENSG00000068137 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
21440825417 40828079 - GC17M040825



21540831981 40834038 + ENSG00000267042
Exon structure


ENSG00000267042
21640830907 40835935 - CCR10
Exon structure
Hs.744542 2826 ENSG00000184451 chemokine (C-C motif) receptor 10
21740839279 40840596 + GC17P040839



21840834631 40852011 + CNTNAP1
Exon structure
Hs.408730 8506 ENSG00000108797 contactin associated protein 1
21940835205 40851484 - ENSG00000267765
Exon structure


ENSG00000267765
22040853961 40853987 - PIR48762
Exon structure




22140854310 40855187 - GC17M040854



22240866317 40866661 + RPL34P30
Exon structure

100271505 ENSG00000239671 ribosomal protein L34 pseudogene 30
22340870024 40874827 - GC17M040871



22440852293 40897071 - EZH1
Exon structure
Hs.194669 2145 ENSG00000108799 enhancer of zeste homolog 1 (Drosophila)
22540894172 40895176 - GC17M040897



22640904749 40905924 - HMGN2P15
Exon structure

100288165 ENSG00000214578 high mobility group nucleosomal binding domain 2 pseudogene 15
22740904898 40905817 - GC17M040913



22840905932 40913275 - RAMP2-AS1
Exon structure
Hs.655265 100190938 ENSG00000197291 RAMP2 antisense RNA 1
22940910465 40915059 + RAMP2
Exon structure
Hs.514193 10266 ENSG00000131477 receptor (G protein-coupled) activity modifying protein 2
23040925454 40931617 + VPS25
Exon structure
Hs.500165 84313 ENSG00000131475 vacuolar protein sorting 25 homolog (S. cerevisiae)
23140935627 40936471 + GC17P040935



23240932649 40949084 + WNK4
Exon structure
Hs.105448 65266 ENSG00000126562 WNK lysine deficient protein kinase 4
23340947165 40950722 - COA3
Exon structure
Hs.16059 28958 ENSG00000183978 cytochrome c oxidase assembly factor 3
23440950888 40956414 + GC17P040952



23540950810 40963605 + CNTD1
Exon structure
Hs.12272 124817 ENSG00000176563 cyclin N-terminal domain containing 1
23640961698 40961725 + PIR34489
Exon structure




23740962459 40962488 - PIR60292
Exon structure




23840962798 40964104 - GC17M040965



23940962150 40985367 - BECN1
Exon structure
Hs.716464 8678 ENSG00000126581 beclin 1, autophagy related
24040972369 40976278 - GC17M040972



24140976402 40985043 + GC17P040976



24240976402 40995777 + PSME3
Exon structure
Hs.152978 10197 ENSG00000131467 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)
24340985435 40986821 + GC17P040986



24440996599 40996654 + GC17P041004



24540996599 40996654 + GC17P041005



24640996609 41002724 + AOC2
Exon structure
Hs.143102 314 ENSG00000131480 amine oxidase, copper containing 2 (retina-specific)
24741003201 41010147 + AOC3
Exon structure
Hs.198241 8639 ENSG00000131471 amine oxidase, copper containing 3
24841017939 41019723 + GC17P041027



24941017939 41026386 + AOC4P
Exon structure
Hs.367781 90586 ENSG00000260105 amine oxidase, copper containing 4, pseudogene
25041020767 41026263 + GC17P041028



25141030029 41030486 + GC17P041030



25241026687 41050751 - LINC00671
Exon structure
Hs.632257 388387 ENSG00000213373 long intergenic non-protein coding RNA 671
25341043355 41043452 - ENSG00000252039
Exon structure


ENSG00000252039
25441052814 41065386 + G6PC
Exon structure
Hs.212293; Hs.742566 2538 ENSG00000131482 glucose-6-phosphatase, catalytic subunit
25541066540 41067352 + GC17P041066



25641076663 41078733 - GC17M041076



25741084865 41084959 - RNY4P2
Exon structure

6088 ENSG00000200510 RNA, Ro-associated Y4 pseudogene 2
25841084865 41084959 - GC17M041088



25941092591 41092719 - GC17M041095



26041092592 41092719 - ENSG00000212149
Exon structure


ENSG00000212149
26141099820 41100221 + GC17P041099



26241100984 41101757 + GC17P041100



26341102543 41108556 - GC17M041106



26441102543 41132545 - PTGES3L-AARSD1
Exon structure
Hs.317403 100885850 ENSG00000108825 PTGES3L-AARSD1 readthrough
26541102543 41132545 - AARSD1
Exon structure

80755 ENSG00000266967 alanyl-tRNA synthetase domain containing 1
26641124403 41124435 - GC17M041125



26741124766 41124795 + GC17P041126



26841124875 41124910 + GC17P041124



26941125075 41125104 + GC17P041125



27041120105 41132545 - PTGES3L
Exon structure

100885848 ENSG00000267060 prostaglandin E synthase 3 (cytosolic)-like
27141127706 41129292 - ENSG00000267230
Exon structure


ENSG00000267230
27241132582 41145707 + RUNDC1
Exon structure
Hs.632255 146923 ENSG00000198863 RUN domain containing 1
27341143542 41143568 + PIR51537
Exon structure




27441143932 41143959 + PIR53885
Exon structure




27541145140 41145171 + PIR42941
Exon structure




27641145140 41145171 + GC17P041155



27741149933 41150024 - ENSG00000200127
Exon structure


ENSG00000200127
27841149934 41150024 - GC17M041153



27941150436 41151296 + GC17P041154



28041150290 41154976 + RPL27
Exon structure
Hs.660076; Hs.514196 6155 ENSG00000131469 ribosomal protein L27
28141154725 41154974 - GC17M041157



28241158805 41165381 + GC17P041159



28341158742 41166476 + IFI35
Exon structure
Hs.632258 3430 ENSG00000068079 interferon-induced protein 35
28441166622 41177140 - VAT1
Exon structure
Hs.514199 10493 ENSG00000108828 vesicle amine transport 1
28541177258 41184058 + RND2
Exon structure
Hs.603111 8153 ENSG00000108830 Rho family GTPase 2
28641181274 41184051 + ENSG00000267267
Exon structure


ENSG00000267267
28741231278 41231833 + RPL21P4
Exon structure

140660 ENSG00000240828 ribosomal protein L21 pseudogene 4
28841231319 41231797 + GC17P041234



28941196312 41277500 - BRCA1
Exon structure
Hs.194143 672 ENSG00000012048 breast cancer 1, early onset
29041276418 41276444 - PIR48082
Exon structure




29141277650 41277678 + PIR61659
Exon structure




29241277600 41305688 + NBR2
Exon structure
Hs.559259; Hs.373818 10230 ENSG00000198496 neighbor of BRCA1 gene 2 (non-protein coding)
29341296973 41297272 + ENSG00000267681
Exon structure


ENSG00000267681
29441300279 41322497 - GC17M041304



29541316200 41322420 - RP11-242D8.1
Exon structure

101929767 ENSG00000267002
29641320187 41320266 - ENSG00000267595
Exon structure


ENSG00000267595
29741320087 41321971 - BRCA1P1
Exon structure

394269
BRCA1 pseudogene 1
29841321897 41322094 - ENSG00000267340
Exon structure


ENSG00000267340
29941322465 41322491 - PIR60622
Exon structure




30041323242 41328693 + GC17P041325



30141322498 41363708 + NBR1
Exon structure
Hs.277721 4077 ENSG00000188554 neighbor of BRCA1 gene 1
30241363894 41366015 + GC17P041364



30341363854 41372061 + TMEM106A
Exon structure
Hs.536474 113277 ENSG00000184988 transmembrane protein 106A
30441368960 41383338 - LINC00854
Exon structure
Hs.546898 100874261 ENSG00000236383 long intergenic non-protein coding RNA 854
30541381732 41382576 + GC17P041384



30641393291 41393906 + GC17P041396



30741437409 41438729 - GC17M041441



30841447213 41466567 - LINC00910
Exon structure
Hs.546897 100130581 ENSG00000188825 long intergenic non-protein coding RNA 910
30941455317 41458968 + GC17P041458



31041464597 41464885 - RNU2-4P
Exon structure

26853
RNA, U2 small nuclear 4, pseudogene
31141473361 41473459 - ENSG00000252882
Exon structure


ENSG00000252882
31241476327 41478505 + ARL4D
Exon structure
Hs.183153 379 ENSG00000175906 ADP-ribosylation factor-like 4D
31341489795 41489898 + ENSG00000251763
Exon structure


ENSG00000251763
31441489796 41489898 + GC17P041495



31541504500 41510923 - GC17M041504



31641514751 41515752 + GC17P041514



31741522174 41522253 + MIR2117
Exon structure

100313779 ENSG00000267151 microRNA 2117
31841522875 41522981 + ENSG00000252279
Exon structure


ENSG00000252279
31941528241 41528271 - GC17M041528



32041550952 41551058 + GC17P041568



32141550953 41551058 + ENSG00000252729
Exon structure


ENSG00000252729
32241553566 41554033 + GC17P041560



32341553522 41554137 + RPL29P31
Exon structure

284064 ENSG00000237888 ribosomal protein L29 pseudogene 31
32441563765 41563814 - GC17M041566



32541561329 41568584 + GC17P041566



32641561233 41621831 + DHX8
Exon structure
Hs.463105 1659 ENSG00000067596 DEAH (Asp-Glu-Ala-His) box polypeptide 8
32741610298 41623683 - GC17M041616



32841613777 41621811 + GC17P041613



32941605211 41656988 - ETV4
Exon structure
Hs.434059 2118 ENSG00000175832 ets variant 4
33041622153 41687706 + ENSG00000267747
Exon structure


ENSG00000267747
33141684803 41685091 - GC17M041689



33241717756 41739322 - MEOX1
Exon structure
Hs.438 4222 ENSG00000005102 mesenchyme homeobox 1
33341754165 41768355 - GC17M041757



33441757641 41783252 + ENSG00000267440
Exon structure


ENSG00000267440
33541791182 41791317 + GC17P041794



33641795682 41797804 - WHSC1L2P
Exon structure

100128016 ENSG00000267253 Wolf-Hirschhorn syndrome candidate 1-like 2, pseudogene
33741825568 41825631 + ENSG00000215964
Exon structure


ENSG00000215964
33841831099 41836156 - SOST
Exon structure
Hs.349204 50964 ENSG00000167941 sclerostin
33941843489 41856368 - DUSP3
Exon structure
Hs.181046 1845 ENSG00000108861 dual specificity phosphatase 3
34041852250 41855705 - GC17M041852



34141857916 41857942 + PIR48941
Exon structure




34241860172 41862050 - ENSG00000267604
Exon structure


ENSG00000267604
34341857803 41864980 + C17orf105
Exon structure
Hs.252707 284067 ENSG00000231256 chromosome 17 open reading frame 105
34441862203 41862230 + PIR46069
Exon structure




34541891379 41892002 - GC17M041892



34641878167 41910547 - MPP3
Exon structure
Hs.396566 4356 ENSG00000161647 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
34741924516 41940997 + CD300LG
Exon structure
Hs.147313 146894 ENSG00000161649 CD300 molecule-like family member g
34841932644 41933164 + GC17P041932



34941952725 41987068 - MPP2
Exon structure
Hs.514208 4355 ENSG00000108852 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
35041960387 41982957 - GC17M041961



35141991801 41994767 - GC17M041994



35241994576 41995355 + FAM215A
Exon structure
Hs.721804 23591 ENSG00000267496 family with sequence similarity 215, member A (non-protein coding)
35341991801 42003711 - LRRC37A10P
Exon structure

100533791 ENSG00000267166 leucine rich repeat containing 37, member A10, pseudogene
35441998050 41998080 - GC17M041998



35541998876 41998903 + PIR32592
Exon structure




35642001199 42003759 - GC17M042001



35742004931 42009990 + ENSG00000267420
Exon structure


ENSG00000267420
35842011474 42013160 + GC17P042011



35942015731 42016327 + ENSG00000261514
Exon structure


ENSG00000261514
36042018172 42018882 - GC17M042018



36142018172 42019836 - PPY
Exon structure
Hs.558368; Hs.744427 5539 ENSG00000108849 pancreatic polypeptide
36242023509 42027711 + GC17P042029



36342030106 42081837 - PYY
Exon structure
Hs.169249 5697 ENSG00000131096 peptide YY
36442081914 42086436 + NAGS
Exon structure
Hs.8876 162417 ENSG00000161653 N-acetylglutamate synthase
36542087078 42087107 + PIR35856
Exon structure




36642088556 42101314 - TMEM101
Exon structure
Hs.514211 84336 ENSG00000091947 transmembrane protein 101
36742102389 42102591 - ENSG00000221044
Exon structure


ENSG00000221044
36842101057 42111361 - GC17M042109



36942112148 42112477 + GC17P042116



37042112516 42112802 + GC17P042117



37142113431 42117708 - GC17M042113



37242112003 42144987 - LSM12
Exon structure
Hs.355570 124801 ENSG00000161654 LSM12 homolog (S. cerevisiae)
37342148535 42153200 + GC17P042149



37442148098 42153712 + G6PC3
Exon structure
Hs.294005 92579 ENSG00000141349 glucose 6 phosphatase, catalytic, 3
37542152357 42152387 + PIR62395
Exon structure




37642152357 42152387 + GC17P042154



37742155976 42156704 - GC17M042160



37842161935 42161963 - PIR36554
Exon structure




37942170740 42170771 + PIR35706
Exon structure




38042170740 42170771 + GC17P042172



38142154114 42201070 - HDAC5
Exon structure
Hs.438782 10014 ENSG00000108840 histone deacetylase 5
38242193280 42197963 + ENSG00000267638
Exon structure


ENSG00000267638
38342213251 42213357 - ENSG00000212446
Exon structure


ENSG00000212446
38442213250 42213357 - GC17M042218



38542219274 42239844 + C17orf53
Exon structure
Hs.437059 78995 ENSG00000125319 chromosome 17 open reading frame 53
38642247253 42248073 - GC17M042247



38742247815 42256451 + ASB16
Exon structure
Hs.534517 92591 ENSG00000161664 ankyrin repeat and SOCS box containing 16
38842257477 42257505 + GC17P042257



38942257786 42257815 + GC17P042259



39042253341 42264085 - ASB16-AS1
Exon structure
Hs.656564 339201 ENSG00000267080 ASB16 antisense RNA 1
39142266362 42266390 + PIR42921
Exon structure




39242266476 42266509 + PIR53071
Exon structure




39342264338 42269099 + TMUB2
Exon structure
Hs.181391 79089 ENSG00000168591 transmembrane and ubiquitin-like domain containing 2
39442269166 42271337 + GC17P042270



39542270467 42270499 - PIR49601
Exon structure




39642270467 42270499 - GC17M042273



39742270805 42270833 - PIR58445
Exon structure




39842272019 42273581 - GC17M042274



39942269173 42277481 - ATXN7L3
Exon structure
Hs.512651 56970 ENSG00000087152 ataxin 7-like 3
40042275014 42275044 - PIR47424
Exon structure




40142275014 42275044 - GC17M042277



40242276250 42293933 + ENSG00000267394
Exon structure


ENSG00000267394
40342289285 42290237 - GC17M042292



40442289548 42290724 - GC17M042295



40542282401 42298994 - UBTF
Exon structure
Hs.89781 7343 ENSG00000108312 upstream binding transcription factor, RNA polymerase I
40642298769 42301078 + ENSG00000260793
Exon structure


ENSG00000260793
40742304329 42307918 - SHC1P2
Exon structure

6466 ENSG00000267691 SHC (Src homology 2 domain containing) transforming protein 1 pseudogene 2
40842306128 42307596 - GC17M042307



40942315208 42315236 + GC17P042315



41042315304 42315334 - GC17M042317



41142325758 42327236 - ENSG00000214921
Exon structure


ENSG00000214921
41242325753 42345509 - SLC4A1
Exon structure
Hs.443948 6521 ENSG00000004939 solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
41342338173 42345509 - GC17M042338



41442335297 42355825 + ENSG00000268413
Exon structure


ENSG00000268413
41542350515 42351685 - GC17M042350



41642368226 42368519 - RN7SL507P
Exon structure

hugo1290 ENSG00000239702 RNA, 7SL, cytoplasmic 507, pseudogene
41742368227 42368519 - GC17M042378



41842381363 42381570 + GC17P042390



41942381382 42381570 + ENSG00000221496
Exon structure


ENSG00000221496
42042384456 42384541 + ENSG00000252628
Exon structure


ENSG00000252628
42142376942 42392683 - AC003102.3
Exon structure

101926996 ENSG00000267750
42242385781 42396039 + RUNDC3A
Exon structure
Hs.500197 10900 ENSG00000108309 RUN domain containing 3A
42342393923 42396038 + GC17P042393



42442396982 42397364 - GC17M042402



42542396996 42397584 + GC17P042398



42642396993 42402238 - SLC25A39
Exon structure
Hs.744880 51629 ENSG00000013306 solute carrier family 25, member 39
42742399841 42402174 - GC17M042404



42842402275 42403494 + GC17P042402



42942405981 42408830 + ENSG00000267211
Exon structure


ENSG00000267211
43042422614 42427262 + GC17P042423



43142422491 42430470 + GRN
Exon structure
Hs.514220 2896 ENSG00000030582 granulin
43242427657 42429163 + GC17P042427



43342430114 42430470 + GC17P042438



43442430114 42430470 + GC17P042439



43542430583 42441243 - FAM171A2
Exon structure
Hs.154001 284069 ENSG00000161682 family with sequence similarity 171, member A2
43642442382 42443119 - RPL7L1P5
Exon structure

390800 ENSG00000267634 ribosomal protein L7-like 1 pseudogene 5
43742446674 42446705 - GC17M042449



43842446723 42446755 - GC17M042448



43942449548 42466873 - ITGA2B
Exon structure
Hs.411312 3674 ENSG00000005961 integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
44042486429 42486726 - RN7SL258P
Exon structure

hugo1019 ENSG00000240589 RNA, 7SL, cytoplasmic 258, pseudogene
44142472645 42580957 - GPATCH8
Exon structure
Hs.463129 23131 ENSG00000186566 G patch domain containing 8
44242553218 42553604 + GC17P042555



44342541893 42580772 - GC17M042544



44442601929 42601964 + GC17P042601



44542602015 42602044 + GC17P042602



44642604485 42604512 + PIR44449
Exon structure




44742634925 42636766 - GC17M042640



44842634812 42638630 + FZD2
Exon structure
Hs.142912 2535 ENSG00000180340 frizzled class receptor 2
44942673714 42674712 + ENSG00000271222
Exon structure


ENSG00000271222
45042722634 42723786 + SMCO4P1
Exon structure

728675 ENSG00000267384 single-pass membrane protein with coiled-coil domains 4 pseudogene 1
45142723732 42727717 - LINC01180
Exon structure

101927017 ENSG00000266979 long intergenic non-protein coding RNA 1180
45242733183 42733213 - PIR42077
Exon structure




45342733183 42733213 - GC17M042736



45442733762 42767676 + C17orf104
Exon structure
Hs.349758 284071 ENSG00000180336 chromosome 17 open reading frame 104
45542751057 42753625 - ENSG00000267160
Exon structure


ENSG00000267160
45642746749 42767856 + GC17P042746



45742750437 42767165 - CCDC43
Exon structure
Hs.579115 124808 ENSG00000180329 coiled-coil domain containing 43
45842796232 42796498 - RN7SL819P
Exon structure

hugo1632 ENSG00000264251 RNA, 7SL, cytoplasmic 819, pseudogene
45942797105 42797983 - RPL6P26
Exon structure

100271035 ENSG00000240305 ribosomal protein L6 pseudogene 26
46042797128 42797965 - GC17M042801



46142786096 42811521 + GC17P042786



46242785976 42829637 + DBF4B
Exon structure
Hs.369998 80174 ENSG00000161692 DBF4 zinc finger B
46342810565 42814372 - GC17M042810



46442825971 42825997 + PIR61260
Exon structure




46542835259 42835905 + GC17P042838



46642836399 42859214 + ADAM11
Exon structure
Hs.6088 4185 ENSG00000073670 ADAM metallopeptidase domain 11
46742870567 42871842 + ENSG00000267505
Exon structure


ENSG00000267505
46842872115 42875151 - ENSG00000267405
Exon structure


ENSG00000267405
46942881070 42881099 - PIR52410
Exon structure




47042875816 42908184 - GJC1
Exon structure
Hs.712052 10052 ENSG00000182963 gap junction protein, gamma 1, 45kDa
47142923721 42927848 + HIGD1B
Exon structure
Hs.287963 51751 ENSG00000131097 HIG1 hypoxia inducible domain family, member 1B
47242925266 42926581 + GC17P042926



47342927836 42928156 + GC17P042931



47442932343 42935007 - GC17M042932



47542927311 42977030 - EFTUD2
Exon structure
Hs.151787 9343 ENSG00000108883 elongation factor Tu GTP binding domain containing 2
47642957845 42959211 - GC17M042957



47742961354 42961639 + RN7SL405P
Exon structure

hugo1180 ENSG00000264540 RNA, 7SL, cytoplasmic 405, pseudogene
47842962624 42976771 - GC17M042963



47942976510 42982758 + CCDC103
Exon structure
Hs.743398 388389 ENSG00000167131 coiled-coil domain containing 103
48042977135 42982758 + FAM187A
Exon structure

100528020 ENSG00000214447 family with sequence similarity 187, member A
48142979974 42980003 + PIR50226
Exon structure




48242980529 42981914 - ENSG00000224911
Exon structure


ENSG00000224911
48342980419 42982722 - GC17M042983



48442983073 42983332 + GC17P042994



48542984930 42984960 + PIR49404
Exon structure




48642984930 42984960 + GC17P042993



48742984253 42988678 - GC17M042999



48842984741 42988678 - GC17M042997



48942987819 42988026 - GC17M042996



49042982376 42994305 - GFAP
Exon structure
Hs.514227 2670 ENSG00000131095 glial fibrillary acidic protein
49142988780 42990135 - GC17M042998



49242997525 42997551 + PIR57257
Exon structure




49343009690 43011344 - GC17M043009



49443002077 43025082 - KIF18B
Exon structure
Hs.135094 146909 ENSG00000186185 kinesin family member 18B
49543025280 43026307 + ENSG00000267334
Exon structure


ENSG00000267334
49643033073 43033231 + GC17P043036



49743037061 43045644 - C1QL1
Exon structure
Hs.134012 10882 ENSG00000131094 complement component 1, q subcomponent-like 1
49843053816 43063175 + GC17P043053



49943059882 43060140 + ENSG00000267788
Exon structure


ENSG00000267788
50043059881 43060140 - GC17M043064



50143059881 43060140 + GC17P043063



50243084258 43091307 - GC17M043084



50343115349 43115380 + GC17P043115



50443100706 43138473 - DCAKD
Exon structure
Hs.463148 79877 ENSG00000172992 dephospho-CoA kinase domain containing
50543139104 43139131 + PIR53442
Exon structure




50643148809 43148909 + GC17P043152



50743148810 43148911 + ENSG00000200888
Exon structure


ENSG00000200888
50843128978 43186384 + NMT1
Exon structure
Hs.532790 4836 ENSG00000136448 N-myristoyltransferase 1
50943183012 43186384 + GC17P043183



51043190940 43192745 - GC17M043190



51143195621 43196289 - GC17M043195



51243186335 43210721 - PLCD3
Exon structure
Hs.380094 113026 ENSG00000161714 phospholipase C, delta 3
51343198603 43209885 - GC17M043198



51443211079 43211198 - GC17M043211



51543209967 43221548 + ACBD4
Exon structure
Hs.110298 79777 ENSG00000181513 acyl-CoA binding domain containing 4
51643222901 43225592 - GC17M043222



51743224684 43229468 + HEXIM1
Exon structure
Hs.741758 10614 ENSG00000186834 hexamethylene bis-acetamide inducible 1
51843227767 43238877 - ENSG00000224505
Exon structure


ENSG00000224505
51943238067 43247407 + HEXIM2
Exon structure
Hs.56382 124790 ENSG00000168517 hexamethylene bis-acetamide inducible 2
52043246172 43248951 - ENSG00000267288
Exon structure


ENSG00000267288
52143267510 43268743 + GC17P043267



52243269438 43270124 + GC17P043269



52343272827 43273445 + GC17P043272



52443268298 43299589 - LOC339192
Exon structure
Hs.560498 339192 ENSG00000267121 Uncharacterized LOC339192 (est)