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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 14

   GeneLoc map region (55,267,425 - 59,277,197 bp) around gene/marker "OTX2"

   Explanation:
   OTX2 is located at 57,267,425-57,277,197 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
155325932 55326048 + GC14P055330



255325933 55326048 + RNU6ATAC9P
Exon structure

hugo3388 ENSG00000252019 RNA, U6atac small nuclear 9, pseudogene
355308723 55369570 - GCH1
Exon structure
Hs.86724 2643 ENSG00000131979 GTP cyclohydrolase 1
455309714 55369205 - GC14M055320



555310756 55369205 - GC14M055317



655344831 55344911 - MIR4308
Exon structure

100422984 ENSG00000265432 microRNA 4308
755351525 55352962 - FDPSP3
Exon structure

2227 ENSG00000258872 farnesyl diphosphate synthase pseudogene 3
855369024 55370518 + GC14P055372



955379237 55379567 + GC14P055379



1055380827 55381263 + GC14P055380



1155391897 55392476 + GC14P055391



1255405656 55493823 - WDHD1
Exon structure
Hs.385998 11169 ENSG00000198554 WD repeat and HMG-box DNA binding protein 1
1355471531 55472405 - GC14M055473



1455471473 55472481 - RPSAP13
Exon structure

3923 ENSG00000233924 ribosomal protein SA pseudogene 13
1555493999 55498712 + GC14P055494



1655493844 55516207 + SOCS4
Exon structure
Hs.744302 122809 ENSG00000180008 suppressor of cytokine signaling 4
1755518409 55527500 + GC14P055519



1855525593 55525954 - GC14M055531



1955525593 55525954 - GC14M055532



2055518349 55536912 + MAPK1IP1L
Exon structure
Hs.594338 93487 ENSG00000168175 mitogen-activated protein kinase 1 interacting protein 1-like
2155529669 55531388 + GC14P055529



2255553592 55561333 - GC14M055556



2355590828 55612148 + LGALS3
Exon structure
Hs.531081 3958 ENSG00000131981 lectin, galactoside-binding, soluble, 3
2455595974 55609473 + GC14P055596



2555617046 55619362 - GC14M055617



2655614830 55658396 - DLGAP5
Exon structure
Hs.77695 9787 ENSG00000126787 discs, large (Drosophila) homolog-associated protein 5
2755658458 55661716 + GC14P055663



2855663445 55665731 - ENSG00000258050
Exon structure


ENSG00000258050
2955695908 55696519 - GC14M055698



3055695911 55696654 + UBE2L1
Exon structure

283556
ubiquitin-conjugating enzyme E2L 1 (pseudogene)
3155707157 55707875 - COX5AP1
Exon structure

9385 ENSG00000271180 cytochrome c oxidase subunit Va pseudogene 1
3255707340 55707798 - GC14M055708



3355729485 55738793 - ENSG00000258413
Exon structure


ENSG00000258413
3455749014 55749361 - RPL34P28
Exon structure

100271500 ENSG00000239686 ribosomal protein L34 pseudogene 28
3555765320 55766214 + CHMP4BP1
Exon structure

100307126 ENSG00000258469 charged multivesicular body protein 4B pseudogene 1
3655738929 55821802 + GC14P055739



3755738021 55828636 + FBXO34
Exon structure
Hs.525348 55030 ENSG00000178974 F-box protein 34
3855792552 55806219 - ENSG00000258455
Exon structure


ENSG00000258455
3955817209 55817236 + PIR42744
Exon structure




4055832303 55832330 - PIR52112
Exon structure




4155833691 55833720 + PIR53477
Exon structure




4255834606 55834637 - GC14M055837



4355834606 55834643 - PIR36872
Exon structure




4455848791 55848818 - PIR34697
Exon structure




4555852751 55852780 - PIR34435
Exon structure




4655833109 55878576 - ATG14
Exon structure
Hs.414809 22863 ENSG00000126775 autophagy related 14
4755861033 55862045 - HMGN1P1
Exon structure

319131 ENSG00000259318 high mobility group nucleosome binding domain 1 pseudogene 1
4855861658 55861951 - GC14M055864



4955880274 55880777 - GC14M055900



5055880258 55880820 - RPL21P6
Exon structure

652975 ENSG00000239199 ribosomal protein L21 pseudogene 6
5155881198 55881215 + GC14P055881



5255880259 55923444 - TBPL2
Exon structure
Hs.528278 387332 ENSG00000182521 TATA box binding protein like 2
5355922636 55922666 - GC14M055922



5455923435 55923470 - GC14M055923



5555923551 55923579 - GC14M055924



5655964856 55966219 + GC14P055964



5755965996 56046828 - KTN1-AS1
Exon structure
Hs.633724 100129075 ENSG00000186615 KTN1 antisense RNA 1
5856010094 56010949 + RPL7AP4
Exon structure

652985 ENSG00000213641 ribosomal protein L7a pseudogene 4
5956013277 56017081 + ABI1P1
Exon structure

326268 ENSG00000271484 abl-interactor 1 pseudogene 1
6056016058 56016636 - GC14M056016



6156025790 56168244 + KTN1
Exon structure
Hs.509414 3895 ENSG00000126777 kinectin 1 (kinesin receptor)
6256118251 56118350 + GC14P056121



6356118252 56118352 + ENSG00000200742
Exon structure


ENSG00000200742
6456117353 56128575 + GC14P056117



6556138580 56141022 + GC14P056138



6656141768 56150441 + GC14P056141



6756221453 56222019 + GC14P056221



6856214926 56239921 + ENSG00000258784
Exon structure


ENSG00000258784
6956232895 56233508 + GC14P056234



7056232895 56234435 + RPL13AP3
Exon structure
Hs.663461 645683 ENSG00000177350 ribosomal protein L13a pseudogene 3
7156247432 56263417 - GC14M056251



7256247853 56263406 - LINC00520
Exon structure
Hs.569345 645687 ENSG00000258791 long intergenic non-protein coding RNA 520
7356306728 56306770 - GC14M056306



7456306987 56307014 + PIR35523
Exon structure




7556382445 56383044 + ENSG00000259868
Exon structure


ENSG00000259868
7656464932 56465307 - ENSG00000213622
Exon structure


ENSG00000213622
7756512565 56515402 + GC14P056517



7856535160 56535243 + GC14P056538



7956535161 56535245 + ENSG00000212522
Exon structure


ENSG00000212522
8056542198 56542284 + ENSG00000221254
Exon structure


ENSG00000221254
8156584532 56768244 + PELI2
Exon structure
Hs.657926 57161 ENSG00000139946 pellino E3 ubiquitin protein ligase family member 2
8256770208 56777479 - ENSG00000259483
Exon structure


ENSG00000259483
8356776790 56777445 + GC14P056780



8456777598 56811719 + ENSG00000259719
Exon structure


ENSG00000259719
8556840733 56840759 + PIR31231
Exon structure




8656859650 56893148 + GC14P056859



8756884239 56888495 - GC14M056884



8856961339 56963315 + GC14P056964



8956967797 56970532 + GC14P056967



9056980668 56982196 - GC14M056984



9156981049 57018027 + LOC101927690
Exon structure

101927690 ENSG00000258803
9256955072 57117324 + TMEM260
Exon structure
Hs.497253 54916 ENSG00000070269 transmembrane protein 260
9357052411 57075907 + GC14P057052



9457075963 57086184 + GC14P057075



9557099962 57115376 - ENSG00000258428
Exon structure


ENSG00000258428
9657118548 57121279 + GC14P057118



9757150095 57150495 - RPL36AP1
Exon structure

100131379 ENSG00000242995 ribosomal protein L36a pseudogene 1
9857150139 57150459 - GC14M057152



9957115683 57197253 - ENSG00000259133
Exon structure


ENSG00000259133
10057206178 57206205 + PIR51405
Exon structure




10157220327 57220446 + GC14P057223



10257226097 57232475 + ENSG00000258703
Exon structure


ENSG00000258703
10357261373 57262540 + GC14P057261



10457265363 57266023 + GC14P057268



10557266623 57267306 - ENSG00000270163
Exon structure


ENSG00000270163
10657267425 57277197 - OTX2
Exon structure
Hs.288655; Hs.741558 5015 ENSG00000165588 orthodenticle homeobox 2
10757291092 57291374 - RN7SL461P
Exon structure

hugo1240 ENSG00000243801 RNA, 7SL, cytoplasmic 461, pseudogene
10857291704 57291810 + ENSG00000200818
Exon structure


ENSG00000200818
10957284288 57360428 - ENSG00000258776
Exon structure


ENSG00000258776
11057324054 57324260 + GC14P057327



11157279901 57397551 + GC14P057284



11257357924 57358237 + GC14P057361



11357366122 57366254 + GC14P057369



11457418305 57421277 - GC14M057418



11557420720 57420960 + GC14P057424



11657445066 57446394 + RPL3P3
Exon structure

645798 ENSG00000243388 ribosomal protein L3 pseudogene 3
11757279901 57618895 + OTX2-AS1
Exon structure
Hs.637962 100309464 ENSG00000248550 OTX2 antisense RNA 1 (head to head)
11857458278 57458320 - GC14M057458



11957507603 57509222 + LOC440180
Exon structure

440180 ENSG00000258758
12057498475 57522449 - GC14M057498



12157511364 57511678 - ENSG00000259136
Exon structure


ENSG00000259136
12257538543 57538663 + GC14P057542



12357532978 57579378 - ENSG00000258592
Exon structure


ENSG00000258592
12457647017 57647049 + GC14P057647



12557671888 57673291 + ENSG00000212928
Exon structure


ENSG00000212928
12657698858 57699941 - GC14M057698



12757669194 57735726 - EXOC5
Exon structure
Hs.743987 10640 ENSG00000070367 exocyst complex component 5
12857741450 57741480 + GC14P057743



12957741450 57741480 + PIR52540
Exon structure




13057735606 57756797 + AP5M1
Exon structure
Hs.597349 55745 ENSG00000053770 adaptor-related protein complex 5, mu 1 subunit
13157773967 57774126 + GC14P057776



13257799861 57799893 - GC14M057799



13357822164 57826128 + ENSG00000259008
Exon structure


ENSG00000259008
13457762446 57929187 + GC14P057764



13557857262 57882635 + NAA30
Exon structure
Hs.165465 122830 ENSG00000139977 N(alpha)-acetyltransferase 30, NatC catalytic subunit
13657894238 57894554 + GC14P057894



13757894302 57919824 - GC14M057894



13857921178 57921297 + GC14P057921



13957945635 57950018 - GC14M057947



14057936019 57960585 - C14orf105
Exon structure
Hs.659706 55195 ENSG00000100557 chromosome 14 open reading frame 105
14157987328 57998218 - GC14M057987



14258045350 58048038 + ENSG00000259039
Exon structure


ENSG00000259039
14358096717 58096743 + PIR51110
Exon structure




14458096559 58097880 + LOC401777
Exon structure

401777 ENSG00000258856
14558030640 58448912 - SLC35F4
Exon structure
Hs.28280 341880 ENSG00000151812 solute carrier family 35, member F4
14658304072 58304378 - RN7SKP99
Exon structure

hugo846 ENSG00000252837 RNA, 7SK small nuclear pseudogene 99
14758309742 58309773 - GC14M058309



14858460263 58461243 - ENSG00000259969
Exon structure


ENSG00000259969
14958460250 58467324 + GC14P058460



15058466453 58470742 - GC14M058467



15158564943 58564960 + GC14P058565



15258567703 58568292 + LOC100420347
Exon structure

100420347 ENSG00000258836
15358597925 58599849 - GC14M058597



15458607997 58608378 + GC14P058609



15558607956 58608476 + UBA52P3
Exon structure

122837 ENSG00000243023 ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3
15658466453 58764857 - C14orf37
Exon structure
Hs.535420 145407 ENSG00000139971 chromosome 14 open reading frame 37
15758646489 58646779 + RN7SL598P
Exon structure

hugo1390 ENSG00000243700 RNA, 7SL, cytoplasmic 598, pseudogene
15858651294 58652225 + ENSG00000258519
Exon structure


ENSG00000258519
15958666888 58675975 + GC14P058667



16058666798 58702354 + ACTR10
Exon structure
Hs.509451 55860 ENSG00000131966 actin-related protein 10 homolog (S. cerevisiae)
16158677802 58701508 + GC14P058677



16258706613 58706685 - TRNAK13
Exon structure

100189107
transfer RNA lysine 13 (anticodon CUU)
16358711592 58712196 + GC14P058712



16458714507 58724799 + GC14P058714



16558711523 58738730 + PSMA3
Exon structure
Hs.558799 5684 ENSG00000100567 proteasome (prosome, macropain) subunit, alpha type, 3
16658730242 58734514 + GC14P058730



16758731380 58736399 + ENSG00000258682
Exon structure


ENSG00000258682
16858736693 58738722 + GC14P058736



16958737698 58737727 - PIR55001
Exon structure




17058732083 58764855 - FLJ31306
Exon structure
Hs.531089 379025 ENSG00000257621 Uncharacterized LOC379025 (est)
17158751427 58752551 + HMGB1P14
Exon structure

319130 ENSG00000180189 high mobility group box 1 pseudogene 14
17258745016 58764796 + GC14P058748



17358754751 58755865 + ENSG00000268466
Exon structure


ENSG00000268466
17458752448 58765145 - GC14M058755



17558759011 58759106 - ENSG00000252782
Exon structure


ENSG00000252782
17658765103 58840605 + ARID4A
Exon structure
Hs.161000 5926 ENSG00000032219 AT rich interactive domain 4A (RBP1-like)
17758818015 58825890 + GC14P058818



17858832193 58838678 + GC14P058832



17958836741 58862359 - ENSG00000258658
Exon structure


ENSG00000258658
18058862634 58875419 + TOMM20L
Exon structure
Hs.592307 387990 ENSG00000196860 translocase of outer mitochondrial membrane 20 homolog (yeast)-like
18158865275 58893843 + ENSG00000258378
Exon structure


ENSG00000258378
18258875212 58894332 - TIMM9
Exon structure
Hs.440525 26520 ENSG00000100575 translocase of inner mitochondrial membrane 9 homolog (yeast)
18358875321 58894245 - GC14M058876



18458908284 58908381 + GC14P058913



18558908562 58908710 + ENSG00000252198
Exon structure


ENSG00000252198
18658930607 58931127 + HSBP1P1
Exon structure

326296 ENSG00000258650 heat shock factor binding protein 1 pseudogene 1
18758894103 59015549 + KIAA0586
Exon structure
Hs.232532 9786 ENSG00000100578 KIAA0586
18858975289 58987918 + GC14P058975



18958987941 58988706 + GC14P058992



19058987652 58989464 + HNRNPCP1
Exon structure

319133 ENSG00000258900 heterogeneous nuclear ribonucleoprotein C pseudogene 1
19159006585 59014772 + GC14P059006



19259030864 59031334 + GC14P059032



19359030776 59031456 + RPL9P5
Exon structure

100129179 ENSG00000239510 ribosomal protein L9 pseudogene 5
19459106822 59106848 - PIR35115
Exon structure




19559100685 59115039 + DACT1
Exon structure
Hs.48950 51339 ENSG00000165617 dishevelled-binding antagonist of beta-catenin 1
19659100929 59114883 - GC14M059100



19759111975 59112086 + GC14P059115



19859153665 59153707 + GC14P059153



19959237870 59237964 - ENSG00000221427
Exon structure


ENSG00000221427
20059261348 59261789 + RPL31P4
Exon structure

729646 ENSG00000213598 ribosomal protein L31 pseudogene 4