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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 13

   GeneLoc map region (111,951,469 - 115,169,878 bp) around gene/marker "LAMP1"

   Explanation:
   LAMP1 is located at 113,951,469-113,977,987 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
1111766906 111958084 + ARHGEF7
Exon structure
Hs.508738 8874 ENSG00000102606 Rho guanine nucleotide exchange factor (GEF) 7
2111955608 111955771 + GC13P111961



3111955608 111955771 + GC13P111962



4111956964 111956990 + PIR49827
Exon structure




5111963646 111963672 + PIR37343
Exon structure




6111969248 111972583 - GC13M111972



7111972862 111972890 + PIR44781
Exon structure




8111968531 111996596 + TEX29
Exon structure
Hs.210677 121793 ENSG00000153495 testis expressed 29
9112044456 112044490 - GC13M112044



10112237238 112239062 - GC13M112237



11112240549 112242292 + GC13P112245



12112240244 112249342 - GC13M112243



13112248356 112294426 + ENSG00000215881
Exon structure


ENSG00000215881
14112276132 112276161 + PIR52047
Exon structure




15112279113 112279141 + PIR57299
Exon structure




16112282275 112282435 + GC13P112285



17112240548 112324955 + ENSG00000204398
Exon structure


ENSG00000204398
18112309309 112317410 - GC13M112309



19112512334 112512365 + PIR43491
Exon structure




20112512334 112512365 + GC13P112517



21112512516 112512547 - PIR57071
Exon structure




22112512516 112512547 - GC13M112514



23112513482 112514507 + GC13P112518



24112549569 112549596 + PIR33312
Exon structure




25112551109 112551138 + PIR31046
Exon structure




26112547393 112555530 + GC13P112552



27112554299 112555490 + LINC00354
Exon structure

101928616 ENSG00000226903 long intergenic non-protein coding RNA 354
28112548720 112569826 - GC13M112551



29112560995 112561024 + PIR56778
Exon structure




30112560995 112561024 + GC13P112564



31112563079 112563148 - ENSG00000264989
Exon structure


ENSG00000264989
32112706392 112706452 + ENSG00000200072
Exon structure


ENSG00000200072
33112706391 112706452 + GC13P112710



34112722130 112722151 + GC13P112722



35112721913 112726020 + SOX1
Exon structure
Hs.202526 6656 ENSG00000182968 SRY (sex determining region Y)-box 1
36112729033 112729233 + GC13P112733



37112737863 112739785 + ENSG00000260385
Exon structure


ENSG00000260385
38112749816 112764886 + GC13P112750



39112757225 112758628 + GC13P112757



40112760409 112761196 - LINC00404
Exon structure

100874160 ENSG00000229520 long intergenic non-protein coding RNA 404
41112761231 112762329 + LINC00403
Exon structure
Hs.734713 100505996 ENSG00000224243 long intergenic non-protein coding RNA 403
42112770139 112770168 - PIR44807
Exon structure




43112810023 112814358 - GC13M112810



44112809471 112815023 - LOC100506016
Exon structure
Hs.371110 100506016
Uncharacterized LOC100506016 (est)
45112834895 112835527 - GC13M112840



46112836583 112850190 - GC13M112839



47112843667 112855314 + GC13P112845



48112851664 112855314 + LINC01070
Exon structure

101928698 ENSG00000260102 long intergenic non-protein coding RNA 1070
49112861514 112867850 - GC13M112861



50112924680 112924715 - GC13M112924



51112925565 112927327 - GC13M112925



52112929297 112929324 + PIR34292
Exon structure




53112928628 112929999 + GC13P112932



54112931818 112931846 - PIR40178
Exon structure




55112967781 112976072 + LINC01043
Exon structure

101928752 ENSG00000260343 long intergenic non-protein coding RNA 1043
56112976881 112985539 - ENSG00000223626
Exon structure


ENSG00000223626
57112986524 112987886 - GC13M112986



58113037075 113037109 - GC13M113037



59113044925 113044956 + GC13P113044



60113030633 113089009 + SPACA7
Exon structure
Hs.97592 122258 ENSG00000153498 sperm acrosome associated 7
61113091885 113092946 + GC13P113091



62113129264 113130337 - GC13M113129



63113132709 113132743 - GC13M113132



64113133888 113133914 - PIR54920
Exon structure




65113136140 113137076 + GC13P113136



66113139325 113242481 - TUBGCP3
Exon structure
Hs.224152 10426 ENSG00000126216 tubulin, gamma complex associated protein 3
67113242483 113243727 + GC13P113242



68113249761 113249791 - GC13M113249



69113301358 113338811 + ATP11AUN
Exon structure
Hs.591213 400165 ENSG00000197595 ATP11A upstream neighbor
70113341387 113344642 - GC13M113344



71113351145 113371989 + GC13P113352



72113372159 113372228 - ENSG00000264726
Exon structure


ENSG00000264726
73113399763 113409007 - ATP11A-AS1
Exon structure

100874205 ENSG00000232684 ATP11A antisense RNA 1
74113406857 113406885 - PIR54522
Exon structure




75113408284 113408316 + PIR40163
Exon structure




76113408284 113408316 + GC13P113411



77113357601 113465013 + GC13P113357



78113344643 113541482 + ATP11A
Exon structure
Hs.29189 23250 ENSG00000068650 ATPase, class VI, type 11A
79113490557 113510242 + GC13P113490



80113505494 113506168 + GC13P113505



81113518867 113521222 + GC13P113521



82113527203 113527712 + GC13P113533



83113527746 113532773 + GC13P113532



84113534615 113536461 + GC13P113534



85113539551 113539994 + ENSG00000234603
Exon structure


ENSG00000234603
86113619149 113620445 - ENSG00000267868
Exon structure


ENSG00000267868
87113621798 113623138 - MCF2L-AS1
Exon structure
Hs.667436 100289410 ENSG00000235280 MCF2L antisense RNA 1
88113621912 113623461 - GC13M113624



89113548692 113754053 + MCF2L
Exon structure
Hs.170422 23263 ENSG00000126217 MCF.2 cell line derived transforming sequence-like
90113663092 113663738 + ENSG00000269356
Exon structure


ENSG00000269356
91113663985 113664633 + ENSG00000269376
Exon structure


ENSG00000269376
92113687115 113687737 + GC13P113687



93113694662 113709219 + GC13P113694



94113730194 113730221 - PIR52168
Exon structure




95113738881 113740479 + GC13P113738



96113740788 113740961 - GC13M113745



97113740788 113740961 - GC13M113746



98113735532 113748902 - GC13M113739



99113744594 113744720 + GC13P113748



100113744594 113744720 + GC13P113749



101113745283 113752862 + GC13P113750



102113755563 113756608 - ENSG00000268130
Exon structure


ENSG00000268130
103113760105 113774995 + F7
Exon structure
Hs.36989 2155 ENSG00000057593 coagulation factor VII (serum prothrombin conversion accelerator)
104113764654 113771149 + GC13P113764



105113777150 113784620 + GC13P113778



106113782469 113783194 - F10-AS1
Exon structure

hugo193 ENSG00000231882 F10 antisense RNA 1
107113784730 113786368 + KARSP2
Exon structure

100419560 ENSG00000230371 lysyl-tRNA synthetase pseudogene 2
108113777113 113803843 + F10
Exon structure
Hs.361463 2159 ENSG00000126218 coagulation factor X
109113804993 113808124 - GC13M113807



110113813440 113814140 - GC13M113817



111113818542 113818572 - GC13M113818



112113819316 113819497 - ENSG00000269125
Exon structure


ENSG00000269125
113113812968 113826694 + PROZ
Exon structure
Hs.1011 8858 ENSG00000126231 protein Z, vitamin K-dependent plasma glycoprotein
114113818322 113824388 - GC13M113820



115113818833 113824828 + GC13P113818



116113831926 113832792 - GC13M113832



117113831891 113863029 - PCID2
Exon structure
Hs.508769 55795 ENSG00000126226 PCI domain containing 2
118113850511 113862962 - GC13M113850



119113863944 113882331 + GC13P113864



120113862552 113919399 + CUL4A
Exon structure
Hs.339735 8451 ENSG00000139842 cullin 4A
121113897339 113897365 + PIR53444
Exon structure




122113921643 113923259 + GC13P113921



123113930931 113932049 + LDHBP1
Exon structure

100289475 ENSG00000232662 lactate dehydrogenase B pseudogene 1
124113938775 113938805 - GC13M113938



125113951469 113977987 + LAMP1
Exon structure
Hs.494419 3916 ENSG00000185896 lysosomal-associated membrane protein 1
126113976082 113976909 + GC13P113979



127113976893 113976923 + PIR60275
Exon structure




128113976893 113976923 + GC13P113978



129113979206 113979241 - GC13M113979



130113978505 114018463 - GRTP1
Exon structure
Hs.745043 79774 ENSG00000139835 growth hormone regulated TBC protein 1
131114005988 114016183 + GRTP1-AS1
Exon structure

100874068 ENSG00000225083 GRTP1 antisense RNA 1
132114013932 114018446 - GC13M114013



133114026972 114027002 - GC13M114026



134114033101 114033134 - GC13M114033



135114043439 114043474 - GC13M114043



136114047217 114047250 - GC13M114047



137114052069 114052098 + PIR34234
Exon structure




138114054706 114054739 - GC13M114055



139114053939 114058436 - GC13M114053



140114076260 114107839 - ADPRHL1
Exon structure
Hs.98669 113622 ENSG00000153531 ADP-ribosylhydrolase like 1
141114092779 114092816 - GC13M114092



142114098034 114098067 - GC13M114098



143114112112 114113858 - GC13M114112



144114110944 114116670 + GC13P114112



145114115370 114117403 - GC13M114116



146114122132 114122166 - GC13M114122



147114123216 114130450 + DCUN1D2-AS
Exon structure

100874229 ENSG00000233613 DCUN1D2 antisense RNA
148114110134 114145267 - DCUN1D2
Exon structure
Hs.682987 55208 ENSG00000150401 DCN1, defective in cullin neddylation 1, domain containing 2
149114133229 114133393 - GC13M114137



150114133230 114133393 - RNU1-16P
Exon structure

100873860 ENSG00000202347 RNA, U1 small nuclear 16, pseudogene
151114166061 114168788 - GC13M114170



152114166061 114168788 + GC13P114168



153114154336 114193797 + GC13P114154



154114145308 114204544 + TMCO3
Exon structure
Hs.317593 55002 ENSG00000150403 transmembrane and coiled-coil domains 3
155114181415 114183483 + GC13P114184



156114200070 114204230 + GC13P114200



157114209219 114209252 - GC13M114209



158114245430 114245461 - GC13M114245



159114246801 114246827 + PIR60549
Exon structure




160114246922 114249004 + GC13P114247



161114253448 114256824 - GC13M114257



162114239036 114288314 + GC13P114240



163114239003 114295788 + TFDP1
Exon structure
Hs.79353 7027 ENSG00000198176 transcription factor Dp-1
164114285936 114285964 + PIR50867
Exon structure




165114291466 114294999 + GC13P114291



166114303119 114312513 - ATP4B
Exon structure
Hs.434202 496 ENSG00000186009 ATPase, H+/K+ exchanging, beta polypeptide
167114308602 114308634 + PIR44469
Exon structure




168114308602 114308634 + GC13P114310



169114321470 114440708 + GRK1
Exon structure
Hs.103501 6011 ENSG00000185974 G protein-coupled receptor kinase 1
170114446312 114448413 - GC13M114449



171114451484 114454062 - LINC00552
Exon structure
Hs.704121 100130386 ENSG00000227208 long intergenic non-protein coding RNA 552
172114456186 114457543 + GC13P114456



173114459242 114459562 - GC13M114463



174114461181 114461210 - PIR45723
Exon structure




175114469137 114472788 + GC13P114469



176114462216 114514926 + TMEM255B
Exon structure
Hs.280805 348013 ENSG00000184497 transmembrane protein 255B
177114502861 114514926 + GC13P114502



178114518583 114548719 + GC13P114520



179114523522 114567046 - GAS6
Exon structure
Hs.646346 2621 ENSG00000183087 growth arrest-specific 6
180114545293 114548734 + GAS6-AS1
Exon structure
Hs.369201 650669 ENSG00000233695 GAS6 antisense RNA 1
181114561229 114562312 - GC13M114561



182114561878 114562528 - GC13M114562



183114567141 114569806 + GAS6-AS2
Exon structure
Hs.132168 100506394 ENSG00000272695 GAS6 antisense RNA 2 (head to head)
184114580581 114582349 + ENSG00000237699
Exon structure


ENSG00000237699
185114581623 114586528 - GC13M114583



186114581673 114586624 - LINC00454
Exon structure

100874178 ENSG00000226921 long intergenic non-protein coding RNA 454
187114586640 114591365 + GC13P114590



188114586610 114626485 + LINC00452
Exon structure
Hs.740982 643365 ENSG00000229373 long intergenic non-protein coding RNA 452
189114598190 114626602 + GC13P114599



190114618803 114621065 + GC13P114618



191114627491 114627519 - PIR38561
Exon structure




192114630140 114630169 - PIR51207
Exon structure




193114629487 114631817 - LINC00565
Exon structure
Hs.353773 100861555 ENSG00000260910 long intergenic non-protein coding RNA 565
194114629487 114637260 - GC13M114634



195114743924 114744957 + GC13P114743



196114747194 114898095 - RASA3
Exon structure
Hs.593075 22821 ENSG00000185989 RAS p21 protein activator 3
197114847333 114847359 + PIR37177
Exon structure




198114847601 114847628 + PIR53976
Exon structure




199114848991 114849018 - PIR54358
Exon structure




200114872485 114872513 + PIR39138
Exon structure




201114872644 114872671 + PIR43235
Exon structure




202114873044 114874295 - RASA3-IT1
Exon structure

100874321 ENSG00000232487 RASA3 intronic transcript 1 (non-protein coding)
203114887749 114887776 - PIR55533
Exon structure




204114915020 114915326 - GC13M114915



205114922734 114922767 - GC13M114922



206114926642 114926668 - PIR45361
Exon structure




207114927019 114927046 + PIR55176
Exon structure




208114927184 114927213 + PIR40508
Exon structure




209114928199 114928225 + PIR42882
Exon structure




210114930218 114930246 + PIR51170
Exon structure




211114931706 114931735 + PIR45145
Exon structure




212114931706 114931735 + GC13P114935



213114932946 114932974 + PIR41654
Exon structure




214114944063 114944563 + GC13P114947



215115009980 115010036 + MIR548AR
Exon structure

100847035 ENSG00000264539 microRNA 548ar
216115011218 115012712 + GC13P115012



217115000362 115038198 + CDC16
Exon structure
Hs.374127 8881 ENSG00000130177 cell division cycle 16
218115039303 115039383 + MIR4502
Exon structure

100616227 ENSG00000265450 microRNA 4502
219115045310 115045833 + GC13P115045



220115047078 115047745 + GC13P115048



221115051849 115057219 + GC13P115051



222115047059 115071292 + UPF3A
Exon structure
Hs.533855 65110 ENSG00000169062 UPF3 regulator of nonsense transcripts homolog A (yeast)
223115068350 115068384 - GC13M115068



224115072121 115072541 + GC13P115075



225115072065 115072671 + CLCP2
Exon structure

100128145 ENSG00000226158 Charcot-Leyden crystal protein pseudogene 2
226115079965 115092803 + CHAMP1
Exon structure
Hs.7542 283489 ENSG00000198824 chromosome alignment maintaining phosphoprotein 1
227115086616 115087916 + GC13P115086



228115095034 115099423 - ENSG00000229723
Exon structure


ENSG00000229723