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  Chromosome 13

   GeneLoc map region (26,494,157 - 30,500,451 bp) around gene/marker "PDX1"

   Explanation:
   PDX1 is located at 28,494,157-28,500,451 bp

    [ GeneLoc Home Page ]


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Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
125946209 26599989 + ATP8A2
Exon structure
Hs.444957 51761 ENSG00000132932 ATPase, aminophospholipid transporter, class I, type 8A, member 2
226518632 26518891 + ENSG00000242381
Exon structure


ENSG00000242381
326524842 26524959 - RNY1P3
Exon structure

100873803 ENSG00000223158 RNA, Ro-associated Y1 pseudogene 3
426545851 26546315 - GC13M026546



526561613 26561640 + PIR56473
Exon structure




626618735 26625198 - SHISA2
Exon structure
Hs.433791 387914 ENSG00000180730 shisa homolog 2 (Xenopus laevis)
726626414 26627523 - LINC00415
Exon structure

100874163 ENSG00000231983 long intergenic non-protein coding RNA 415
826689950 26693125 - PRUNEP1
Exon structure

100129595 ENSG00000234706 prune homolog (Drosophila) pseudogene 1
926688547 26728313 - ATP8A2P3
Exon structure

100874518 ENSG00000233963 ATPase, aminophospholipid transporter, class I, type 8A, member 2 pseudogene 3
1026708418 26708948 - GC13M026709



1126706253 26796791 - RNF6
Exon structure
Hs.136885 6049 ENSG00000127870 ring finger protein (C3H2C3 type) 6
1226808350 26811266 + PRKRIRP6
Exon structure

100128764 ENSG00000227882 protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) pseudogene 6
1326810998 26811028 - PIR37941
Exon structure




1426845484 26846503 + GC13P026846



1526828276 26979375 + CDK8
Exon structure
Hs.382306 1024 ENSG00000132964 cyclin-dependent kinase 8
1626963891 26967368 + GC13P026964



1726979086 26979374 + GC13P026982



1827083363 27092904 + GC13P027084



1927150995 27151858 + RPS3AP44
Exon structure

646527 ENSG00000234031 ribosomal protein S3a pseudogene 44
2027131840 27263085 + WASF3
Exon structure
Hs.618732 10810 ENSG00000132970 WAS protein family, member 3
2127180681 27215501 - WASF3-AS1
Exon structure

100874061 ENSG00000237001 WASF3 antisense RNA 1
2227261311 27261338 + PIR53379
Exon structure




2327329337 27334922 - GPR12
Exon structure
Hs.123034 2835 ENSG00000132975 G protein-coupled receptor 12
2427332961 27333964 - GC13M027334



2527359863 27359899 + PIR57206
Exon structure




2627479499 27479998 + FGFR1OP2P1
Exon structure

100873883 ENSG00000230256 FGFR1 oncogene partner 2 pseudogene 1
2727551680 27551926 + RPS21P8
Exon structure

100873798 ENSG00000223782 ribosomal protein S21 pseudogene 8
2827591654 27592165 - RPS20P32
Exon structure

100129306 ENSG00000218198 ribosomal protein S20 pseudogene 32
2927632486 27639529 + GC13P027633



3027651355 27652091 + RBBP8P2
Exon structure

100420607
retinoblastoma binding protein 8 pseudogene 2
3127640287 27746033 - USP12
Exon structure
Hs.42400 219333 ENSG00000152484 ubiquitin specific peptidase 12
3227736992 27743272 + USP12-AS1
Exon structure

100874070 ENSG00000232162 USP12 antisense RNA 1
3327746396 27757135 + USP12-AS2
Exon structure

100874071 ENSG00000230641 USP12 antisense RNA 2 (head to head)
3427752301 27760746 - GC13M027753



3527775342 27776444 - GC13M027776



3627781431 27782326 - GC13M027782



3727790495 27790521 - PIR56248
Exon structure




3827810419 27810948 - ENSG00000234772
Exon structure


ENSG00000234772
3927819822 27824854 - GC13M027820



4027825446 27830828 + RPL21
Exon structure
Hs.381123; Hs.535873 6144 ENSG00000122026 ribosomal protein L21
4127828748 27828777 + PIR55933
Exon structure




4227827871 27830420 + GC13P027836



4327829201 27829272 + SNORD102
Exon structure

26771 ENSG00000207500 small nucleolar RNA, C/D box 102
4427829200 27829272 + GC13P027835



4527829538 27829663 + SNORA27
Exon structure
Hs.689719 619499 ENSG00000207051 small nucleolar RNA, H/ACA box 27
4627829537 27829666 + GC13P027834



4727844464 27847827 + RASL11A
Exon structure
Hs.192131 387496 ENSG00000122035 RAS-like, family 11, member A
4827894150 27894296 + ENSG00000221756
Exon structure


ENSG00000221756
4927917785 27917883 - RNU6-70
Exon structure

hugo447 ENSG00000252247 RNA, U6 small nuclear 70
5027947485 27948503 + ENSG00000229609
Exon structure


ENSG00000229609
5127976613 27976724 - RNY1P1
Exon structure

100873802 ENSG00000201242 RNA, Ro-associated Y1 pseudogene 1
5227976614 27976724 - GC13M027978



5327998681 28009958 + GTF3A
Exon structure
Hs.445977 2971 ENSG00000122034 general transcription factor IIIA
5428008286 28008752 - ENSG00000203602
Exon structure


ENSG00000203602
5528009776 28024739 - MTIF3
Exon structure
Hs.534582 219402 ENSG00000122033 mitochondrial translational initiation factor 3
5628024405 28024432 - PIR36871
Exon structure




5728042429 28043015 - GC13M028043



5828062275 28062369 + RNU6-63
Exon structure

100873768 ENSG00000252499 RNA, U6 small nuclear 63
5928120050 28194720 - LNX2
Exon structure
Hs.132359 222484 ENSG00000139517 ligand of numb-protein X 2
6028198329 28198871 + GC13P028201



6128194903 28241548 + POLR1D
Exon structure
Hs.507584 51082 ENSG00000186184 polymerase (RNA) I polypeptide D, 16kDa
6228252397 28254702 - LOC100506997
Exon structure
Hs.569264 100506997
Uncharacterized LOC100506997 (est)
6328270213 28271439 - NPM1P4
Exon structure

100128903 ENSG00000226703 nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 4
6428366780 28368905 + GSX1
Exon structure
Hs.351785 219409 ENSG00000169840 GS homeobox 1
6528402899 28403006 + GC13P028404



6628402900 28403006 + RNU6-73
Exon structure

hugo448 ENSG00000207330 RNA, U6 small nuclear 73
6728403906 28495541 - PDX1-AS1
Exon structure

100861550 ENSG00000247381 PDX1 antisense RNA 1
6828494157 28500451 + PDX1
Exon structure
Hs.32938 3651 ENSG00000139515 pancreatic and duodenal homeobox 1
6928519343 28519727 + ATP5EP2
Exon structure
Hs.574118 432369 ENSG00000180389 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2
7028527663 28529507 + LINC00543
Exon structure
Hs.197435 100132234 ENSG00000260704 long intergenic non-protein coding RNA 543
7128535826 28545276 - CDX2
Exon structure
Hs.174249 1045 ENSG00000165556 caudal type homeobox 2
7228552243 28562774 - PRHOXNB
Exon structure
Hs.705356 646625 ENSG00000183463 parahox cluster neighbor
7328563435 28563721 - ENSG00000242360
Exon structure


ENSG00000242360
7428568289 28568315 + PIR32072
Exon structure




7528588621 28597558 - GC13M028590



7628588622 28597558 - GC13M028591



7728577411 28674729 - FLT3
Exon structure
Hs.507590 2322 ENSG00000122025 fms-related tyrosine kinase 3
7828641724 28642480 + LOC100420919
Exon structure

100420919

7928681568 28682014 + CHCHD2P8
Exon structure

646630 ENSG00000235115 coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 8
8028710980 28713311 - PAN3-AS1
Exon structure
Hs.123191 100288730 ENSG00000261485 PAN3 antisense RNA 1
8128788650 28790034 + EEF1A1P3
Exon structure

100421865 ENSG00000232587 eukaryotic translation elongation factor 1 alpha 1 pseudogene 3
8228712643 28869475 + PAN3
Exon structure
Hs.645015 255967 ENSG00000152520 PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
8328806637 28806744 + GC13P028808



8428806638 28806744 + RNU6-82
Exon structure

100873781 ENSG00000200840 RNA, U6 small nuclear 82
8528868449 28868683 + GC13P028870



8628882716 28883502 + GC13P028883



8728959687 28961478 - GC13M028961



8828874483 29069265 - FLT1
Exon structure
Hs.594454 2321 ENSG00000102755 fms-related tyrosine kinase 1
8929069769 29071404 + GC13P029071



9029172954 29174341 + EIF4A1P7
Exon structure

341784 ENSG00000235472 eukaryotic translation initiation factor 4A1 pseudogene 7
9129173842 29174130 + GC13P029176



9229203930 29204018 + GC13P029205



9329233241 29253094 + POMP
Exon structure
Hs.268742 51371 ENSG00000132963 proteasome maturation protein
9429252194 29252225 + PIR58876
Exon structure




9529277838 29277944 - GC13M029279



9629277839 29277944 - RNU6-53
Exon structure

100873762 ENSG00000202237 RNA, U6 small nuclear 53
9729274201 29293150 - SLC46A3
Exon structure
Hs.117167 283537 ENSG00000139508 solute carrier family 46, member 3
9829293261 29299073 + GC13P029295



9929295001 29298296 - CYP51P2
Exon structure

83530 ENSG00000233588 cytochrome P450, family 51, pseudogene 2
10029344749 29360542 + GC13P029345



10129352695 29353074 + POM121L13P
Exon structure

100874379 ENSG00000236339 POM121 transmembrane nucleoporin-like 13, pseudogene
10229390783 29398788 - GC13M029391



10329494157 29495937 - GC13M029495



10429575314 29581005 - GC13M029576



10529579735 29581012 - GC13M029579



10629626202 29626723 + GC13P029627



10729624022 29631758 - GC13M029625



10829668579 29669018 - GC13M029669



10929788496 29792040 - GC13M029789



11029796699 29796778 + ENSG00000221670
Exon structure


ENSG00000221670
11129813516 29824691 - MTUS2-AS2
Exon structure

100874106 ENSG00000236758 MTUS2 antisense RNA 2
11229814596 29837898 - GC13M029816



11329813495 29839804 - GC13M029817



11429812406 29846051 - GC13M029812



11529829401 29849282 - GC13M029829



11629598748 30080084 + MTUS2
Exon structure
Hs.22287 23281 ENSG00000132938 microtubule associated tumor suppressor candidate 2
11729835312 29845169 - GC13M029835



11829880844 29882111 + GAPDHP69
Exon structure

2611 ENSG00000223460 glyceraldehyde 3 phosphate dehydrogenase pseudogene 69
11929968219 29968247 + PIR44178
Exon structure




12030050652 30061887 - MTUS2-AS1
Exon structure
Hs.577987 100874107 ENSG00000179141 MTUS2 antisense RNA 1
12130084226 30084254 - PIR48904
Exon structure




12230085353 30085382 - PIR61494
Exon structure




12330086439 30086471 - PIR35309
Exon structure




12430083547 30169825 - SLC7A1
Exon structure
Hs.14846 6541 ENSG00000139514 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
12530144334 30144360 - PIR32808
Exon structure




12630160970 30161289 + GC13P030162



12730170019 30170919 + GC13P030171



12830221777 30229578 + GC13P030222



12930229206 30229615 - GC13M030230



13030275342 30282782 + GC13P030276



13130354687 30355532 + GC13P030355



13230338508 30424821 - UBL3
Exon structure
Hs.145575 5412 ENSG00000122042 ubiquitin-like 3
13330402813 30403619 - GC13M030403



13430440096 30440306 - TIMM8BP1
Exon structure

100874425 ENSG00000236258 translocase of inner mitochondrial membrane 8B pseudogene 1
13530446750 30462542 + LINC00297
Exon structure
Hs.569261 100874059 ENSG00000224329 long intergenic non-protein coding RNA 297
13630467298 30468275 - GC13M030467



13730492784 30500788 - LINC00572
Exon structure
Hs.585619 100861573 ENSG00000224405 long intergenic non-protein coding RNA 572
13830416271 30733758 - GC13M030417



13930416271 30781018 - GC13M030416