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  Chromosome 13

   GeneLoc map region (19,140,585 - 23,265,576 bp) around gene/marker "IFT88"

   Explanation:
   IFT88 is located at 21,140,585-21,265,576 bp

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Start
(bp)
End
(bp)
Strand
Gene
Unigene cluster
Entrez Gene Id
Ensembl Id
Description
119146763 19150078 - GC13M019150



219183186 19183845 + LONRF2P2
Exon structure

100421799 ENSG00000233905 LON peptidase N-terminal domain and ring finger 2 pseudogene 2
319184438 19185815 - LINC00388
Exon structure

100874153 ENSG00000229788 long intergenic non-protein coding RNA 388
419238296 19241874 + FEM1AP4
Exon structure

729524 ENSG00000235876 fem-1 homolog a (C. elegans) pseudogene 4
519246967 19250303 + LINC00387
Exon structure

100874152 ENSG00000231914 long intergenic non-protein coding RNA 387
619254634 19257440 + TERF1P5
Exon structure

283523 ENSG00000226361 telomeric repeat binding factor (NIMA-interacting) 1 pseudogene 5
719271143 19271651 + FAM207BP
Exon structure

729535 ENSG00000228797 family with sequence similarity 207, member B, pseudogene
819283849 19284042 - BCYRN1P3
Exon structure

654337
brain cytoplasmic RNA 1, pseudogene 3
919292907 19293869 - LINC00418
Exon structure

hugo241 ENSG00000236169 long intergenic non-protein coding RNA 418
1019297860 19299044 - GXYLT1P1
Exon structure

100101111 ENSG00000230931 glucoside xylosyltransferase 1 pseudogene 1
1119300846 19301582 + CNN2P12
Exon structure

100131550 ENSG00000204718 calponin 2 pseudogene 12
1219307859 19309036 + ZNF965P
Exon structure

100132598 ENSG00000227784 zinc finger protein 965, pseudogene
1319315870 19316858 - CYP4F34P
Exon structure

100422247 ENSG00000244155 cytochrome P450, family 4, subfamily F, polypeptide 34, pseudogene
1419326568 19326595 - PIR48570
Exon structure




1519327527 19327553 - PIR32480
Exon structure




1619330124 19330153 - PIR50321
Exon structure




1719337013 19337043 - PIR46230
Exon structure




1819337013 19337043 - GC13M019339



1919358468 19358497 - PIR47625
Exon structure




2019382149 19382178 - PIR59588
Exon structure




2119381416 19382995 - SNX18P26
Exon structure

100419038 ENSG00000227568 sorting nexin 18 pseudogene 26
2219383970 19384188 + LINC00328-2P
Exon structure

100874404 ENSG00000225016 long intergenic non-protein coding RNA 328-2, pseudogene
2319385283 19411480 - LOC645626
Exon structure

645626

2419411282 19411311 - PIR49646
Exon structure




2519411907 19412238 - RHOT1P3
Exon structure

100462810 ENSG00000242756 ras homolog family member T1 pseudogene 3
2619412207 19412236 - PIR40032
Exon structure




2719390858 19446109 - ANKRD20A9P
Exon structure
Hs.742626 284232 ENSG00000206192 ankyrin repeat domain 20 family, member A9, pseudogene
2819427511 19427538 + PIR61929
Exon structure




2919433967 19434882 + ENSG00000227332
Exon structure


ENSG00000227332
3019443325 19443431 - RNU6-55P
Exon structure

100873763 ENSG00000223024 RNA, U6 small nuclear 55, pseudogene
3119454193 19454297 + GC13P019458



3219454194 19454297 + RNU6-76P
Exon structure

100873777 ENSG00000206787 RNA, U6 small nuclear 76, pseudogene
3319464957 19469880 - SNX19P2
Exon structure

400094 ENSG00000235500 sorting nexin 19 pseudogene 2
3419479579 19500881 + LINC00408
Exon structure
Hs.549878 100652856 ENSG00000226250 long intergenic non-protein coding RNA 408
3519479578 19500896 + GC13P019483



3619496029 19497905 - ENSG00000231358
Exon structure


ENSG00000231358
3719521321 19521347 - PIR50693
Exon structure




3819536750 19536777 - PIR33396
Exon structure




3919564028 19564058 - PIR37468
Exon structure




4019574839 19575369 + GC13P019576



4119520895 19636858 - PHF2P2
Exon structure

100873793 ENSG00000226057 PHD finger protein 2 pseudogene 2
4219582725 19582751 - PIR40272
Exon structure




4319582399 19586774 + LINC00442
Exon structure
Hs.314114 348021 ENSG00000232685 long intergenic non-protein coding RNA 442
4419582398 19589338 + GC13P019585



4519586196 19586225 - PIR53059
Exon structure




4619589627 19593476 - USP24P1
Exon structure

100874248 ENSG00000229375 ubiquitin specific peptidase 24 pseudogene 1
4719601977 19602841 + ENSG00000226619
Exon structure


ENSG00000226619
4819600138 19606766 - GTF2IP3
Exon structure

645686 ENSG00000187721 general transcription factor IIi, pseudogene 3
4919620293 19692423 - PHF2P1
Exon structure
Hs.742132 266695
PHD finger protein 2 pseudogene 1
5019662627 19662721 + RNA5SP24
Exon structure

100873356 ENSG00000252287 RNA, 5S ribosomal pseudogene 24
5119669878 19669904 - PIR49445
Exon structure




5219692122 19692149 - PIR48958
Exon structure




5319700539 19713751 + CENPIP1
Exon structure

100419337 ENSG00000224778 centromere protein I pseudogene 1
5419717122 19717217 + RNU6-52P
Exon structure

100873761 ENSG00000252675 RNA, U6 small nuclear 52, pseudogene
5519725694 19726447 - ENSG00000234894
Exon structure


ENSG00000234894
5619727275 19727301 + PIR40837
Exon structure




5719725607 19745541 - SMPD4P2
Exon structure

441654 ENSG00000229147 sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) pseudogene 2
5819747910 19755992 - TUBA3C
Exon structure
Hs.349695 7278 ENSG00000198033 tubulin, alpha 3c
5919756173 19761496 + ENSG00000121388
Exon structure


ENSG00000121388
6019759428 19759454 + PIR48761
Exon structure




6119756123 19763579 + GC13P019758



6219775777 19801572 - PSPC1P1
Exon structure

642395 ENSG00000227879 paraspeckle component 1 pseudogene 1
6319836937 19838013 - ENSG00000232243
Exon structure


ENSG00000232243
6419866608 19866638 - PIR49599
Exon structure




6519836940 19919113 - ANKRD26P3
Exon structure
Hs.129283 100101938 ENSG00000237636 ankyrin repeat domain 26 pseudogene 3
6619878205 19879900 - MRPL3P1
Exon structure

359739 ENSG00000215349 mitochondrial ribosomal protein L3 pseudogene 1
6719919189 19920889 + LINC00421
Exon structure
Hs.375063 100287114 ENSG00000236834 long intergenic non-protein coding RNA 421
6819923276 19982293 + PARP4P2
Exon structure

645771 ENSG00000224976 poly (ADP-ribose) polymerase family, member 4 pseudogene 2
6919956348 19957525 + FAM58DP
Exon structure

100421566 ENSG00000231184 family with sequence similarity 58, member D, pseudogene
7019982182 19983669 - ENSG00000229791
Exon structure


ENSG00000229791
7119985371 19990328 + SLC25A15P2
Exon structure

100874522 ENSG00000237164 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 pseudogene 2
7220032538 20032858 - CYCSP32
Exon structure

360181 ENSG00000223625 cytochrome c, somatic pseudogene 32
7319997017 20110903 - TPTE2
Exon structure
Hs.377488 93492 ENSG00000132958 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2
7420133953 20135412 - ESRRAP1
Exon structure

144847 ENSG00000215572 estrogen-related receptor alpha pseudogene 1
7520126710 20144428 - MRPS31P2
Exon structure

341757 ENSG00000232894 mitochondrial ribosomal protein S31 pseudogene 2
7620131972 20139336 - CASC4P1
Exon structure

100420689 ENSG00000238132 cancer susceptibility candidate 4 pseudogene 1
7720133177 20142960 - GC13M020139



7820161258 20162490 + LINC00350
Exon structure

100874136 ENSG00000225316 long intergenic non-protein coding RNA 350
7920177187 20177214 + PIR42308
Exon structure




8020179731 20199044 + GC13P020181



8120199831 20199858 + PIR53239
Exon structure




8220207788 20247599 + MPHOSPH8
Exon structure
Hs.269654 54737 ENSG00000196199 M-phase phosphoprotein 8
8320241348 20244877 - GC13M020244



8420247071 20247197 - ENSG00000257110
Exon structure


ENSG00000257110
8520248764 20250024 + ENSG00000226352
Exon structure


ENSG00000226352
8620268547 20269240 + ENSG00000269591
Exon structure


ENSG00000269591
8720248896 20357142 - PSPC1
Exon structure
Hs.213198 55269 ENSG00000121390 paraspeckle component 1
8820311117 20311394 - RN7SL166P
Exon structure

hugo811 ENSG00000265624 RNA, 7SL, cytoplasmic 166, pseudogene
8920392261 20392759 - ST6GALNAC4P1
Exon structure

100874524 ENSG00000233469 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 pseudogene 1
9020415967 20417812 + ENSG00000223576
Exon structure


ENSG00000223576
9120397622 20437776 - ZMYM5
Exon structure
Hs.530988 9205 ENSG00000132950 zinc finger, MYM-type 5
9220437124 20439190 + LOC400099
Exon structure

400099

9320449327 20449425 + ENSG00000238665
Exon structure


ENSG00000238665
9420504944 20505031 - ENSG00000266230
Exon structure


ENSG00000266230
9520530916 20532202 + GC13P020533



9620553662 20554892 + GC13P020556



9720532810 20665968 + ZMYM2
Exon structure
Hs.507433 7750 ENSG00000121741 zinc finger, MYM-type 2
9820644127 20646276 - KRR1P1
Exon structure

100422486 ENSG00000237672 KRR1, small subunit (SSU) processome component, homolog (yeast) pseudogene 1
9920645636 20645662 + PIR51697
Exon structure




10020666770 20668283 + GC13P020668



10120676840 20677369 + LINC01072
Exon structure

hugo278 ENSG00000236076 long intergenic non-protein coding RNA 1072
10220712394 20735188 - GJA3
Exon structure
Hs.130313 2700 ENSG00000121743 gap junction protein, alpha 3, 46kDa
10320753117 20753601 - PPIAP28
Exon structure

390378 ENSG00000226633 peptidylprolyl isomerase A (cyclophilin A) pseudogene 28
10420755670 20756081 + LINC00556
Exon structure
Hs.572247 100861551 ENSG00000260131 long intergenic non-protein coding RNA 556
10520763107 20763134 - PIR56183
Exon structure




10620759544 20766997 + GC13P020764



10720761602 20767114 - GJB2
Exon structure
Hs.524894 2706 ENSG00000165474 gap junction protein, beta 2, 26kDa
10820768550 20770144 + GC13P020772



10920796101 20806534 - GJB6
Exon structure
Hs.511757 10804 ENSG00000121742 gap junction protein, beta 6, 30kDa
11020797500 20806372 - GC13M020809



11120797500 20806372 - GC13M020811



11220797501 20806372 - GC13M020810



11320797547 20806372 - GC13M020812



11420856668 20857338 + GC13P020858



11521007917 21007985 - MIR4499
Exon structure

100616304 ENSG00000263978 microRNA 4499
11620977806 21100012 - CRYL1
Exon structure
Hs.370703 51084 ENSG00000165475 crystallin, lambda 1
11721142039 21142066 + PIR57097
Exon structure




11821186299 21186477 + GC13P021189



11921186300 21186477 + RNU2-7P
Exon structure

100873824 ENSG00000222726 RNA, U2 small nuclear 7, pseudogene
12021140585 21265576 + IFT88
Exon structure
Hs.187376 8100 ENSG00000032742 intraflagellar transport 88 homolog (Chlamydomonas)
12121217617 21217648 + PIR33855
Exon structure




12221181218 21266663 + SLC35E1P1
Exon structure

727991 ENSG00000238286 solute carrier family 35, member E1 pseudogene 1
12321276298 21277857 - GC13M021282



12421277842 21277922 + ENSG00000265710
Exon structure


ENSG00000265710
12521276266 21297237 + IL17D
Exon structure
Hs.655142 53342 ENSG00000172458 interleukin 17D
12621286771 21287261 + LOC100507583
Exon structure

100507583

12721278217 21295884 - GC13M021283



12821278218 21295884 - GC13M021284



12921286570 21288285 + ENSG00000203614
Exon structure


ENSG00000203614
13021296608 21296904 - GC13M021305



13121296608 21297237 - GC13M021302



13221296608 21297237 - GC13M021303



13321321174 21322196 - RANP8
Exon structure

100420519 ENSG00000233524 RAN, member RAS oncogene family pseudogene 8
13421302870 21348097 - N6AMT2
Exon structure
Hs.26674 221143 ENSG00000150456 N-6 adenine-specific DNA methyltransferase 2 (putative)
13521344908 21348817 - GC13M021346



13621399645 21399803 + GC13P021402



13721351468 21477187 - XPO4
Exon structure
Hs.507452 64328 ENSG00000132953 exportin 4
13821495803 21497372 - CNOT4P1
Exon structure

100874389 ENSG00000236704 CCR4-NOT transcription complex, subunit 4 pseudogene 1
13921512703 21523798 - HNRNPA1P30
Exon structure

440125 ENSG00000233780 heterogeneous nuclear ribonucleoprotein A1 pseudogene 30
14021530318 21530582 - PPIAP27
Exon structure

100874405 ENSG00000234363 peptidylprolyl isomerase A (cyclophilin A) pseudogene 27
14121535373 21536407 + RPSAP54
Exon structure

642641 ENSG00000213621 ribosomal protein SA pseudogene 54
14221543457 21543555 + ENSG00000238893
Exon structure


ENSG00000238893
14321573506 21573606 - RNU6-51P
Exon structure

hugo2737 ENSG00000251902 RNA, U6 small nuclear 51, pseudogene
14421579296 21592261 + LATS2-AS1
Exon structure

100874066 ENSG00000233851 LATS2 antisense RNA 1
14521547171 21635722 - LATS2
Exon structure
Hs.78960 26524 ENSG00000150457 large tumor suppressor kinase 2
14621612668 21612806 - RNU4-9P
Exon structure

100862675 ENSG00000201821 RNA, U4 small nuclear 9, pseudogene
14721612667 21612806 - GC13M021615



14821668434 21668934 - RPS12P23
Exon structure

338870 ENSG00000180172 ribosomal protein S12 pseudogene 23
14921677142 21678510 - IPPKP1
Exon structure

100874419 ENSG00000225585 inositol 1,3,4,5,6-pentakisphosphate 2-kinase pseudogene 1
15021700409 21700535 - GC13M021702



15121714025 21714096 - ENSG00000252128
Exon structure


ENSG00000252128
15221716330 21716629 - RN7SL80P
Exon structure

hugo1514 ENSG00000263607 RNA, 7SL, cytoplasmic 80, pseudogene
15321714653 21723224 + SAP18
Exon structure
Hs.524899 10284 ENSG00000150459 Sin3A-associated protein, 18kDa
15421727734 21750741 - SKA3
Exon structure
Hs.88523 221150 ENSG00000165480 spindle and kinetochore associated complex subunit 3
15521750372 21753223 + MRP63
Exon structure
Hs.458367 78988 ENSG00000173141 mitochondrial ribosomal protein 63
15621769074 21771935 + GC13P021771



15721790694 21790799 + ENSG00000271250
Exon structure


ENSG00000271250
15821808707 21809343 + LINC01046
Exon structure

hugo265 ENSG00000233405 long intergenic non-protein coding RNA 1046
15921834154 21867568 + ESRRAP2
Exon structure

144832 ENSG00000235438 estrogen-related receptor alpha pseudogene 2
16021861545 21868998 + ENSG00000229137
Exon structure


ENSG00000229137
16121872479 21876009 - GC13M021875



16221872264 21906210 + MIPEPP3
Exon structure
Hs.147563 650794 ENSG00000233325 mitochondrial intermediate peptidase pseudogene 3
16321872263 21906571 + GC13P021880



16421893166 21895829 + GRK6P1
Exon structure

2871 ENSG00000215571 G protein-coupled receptor kinase 6 pseudogene 1
16521877510 21922860 - LINC00539
Exon structure
Hs.659198 100652865 ENSG00000224429 long intergenic non-protein coding RNA 539
16621902974 21906571 - GC13M021903



16721932512 21933453 + GAPDHP52
Exon structure

100421313 ENSG00000235076 glyceraldehyde 3 phosphate dehydrogenase pseudogene 52
16821934328 21934357 - PIR62666
Exon structure




16921943929 21944038 - RNA5SP25
Exon structure

100873357 ENSG00000222747 RNA, 5S ribosomal pseudogene 25
17021946715 21948651 - GC13M021947



17121951116 21952013 - ZDHHC20-IT1
Exon structure

100874367 ENSG00000236953 ZDHHC20 intronic transcript 1 (non-protein coding)
17221946710 22033509 - ZDHHC20
Exon structure
Hs.564611 253832 ENSG00000180776 zinc finger, DHHC-type containing 20
17322009586 22009612 - PIR53166
Exon structure




17422032145 22032171 - PIR62825
Exon structure




17522032723 22034752 + GC13P022035



17622057973 22058313 - HIST1H2BPS3
Exon structure

100820735 ENSG00000226908 histone cluster 1, H2b, pseudogene 3
17722101939 22102039 - ENSG00000238878
Exon structure


ENSG00000238878
17822104828 22105995 + FNTAP2
Exon structure

2341 ENSG00000230022 farnesyltransferase, CAAX box, alpha pseudogene 2
17922066828 22178355 - MICU2
Exon structure
Hs.412103 221154 ENSG00000165487 mitochondrial calcium uptake 2
18022125443 22125549 - RNU6-59P
Exon structure

100873767 ENSG00000207518 RNA, U6 small nuclear 59, pseudogene
18122125442 22125549 - GC13M022129



18222182228 22183804 + GC13P022184



18322202537 22203198 - RPS7P10
Exon structure

100128060 ENSG00000226525 ribosomal protein S7 pseudogene 10
18422225658 22245083 - GC13M022227



18522245215 22278640 + FGF9
Exon structure
Hs.111 2254 ENSG00000102678 fibroblast growth factor 9
18622364676 22364982 + RN7SL766P
Exon structure

hugo1466 ENSG00000244197 RNA, 7SL, cytoplasmic 766, pseudogene
18722446909 22449705 - LINC00424
Exon structure
Hs.148951; Hs.737034 100874182 ENSG00000226722 long intergenic non-protein coding RNA 424
18822446908 22450817 - GC13M022448



18922673302 22673683 - NME1P1
Exon structure

100874501 ENSG00000237175 NME/NM23 nucleoside diphosphate kinase 1 pseudogene 1
19022687258 22687477 - MTND3P1
Exon structure

100873208 ENSG00000226118 MT-ND3 pseudogene 1
19122615058 22850665 + GC13P022618



19222784424 22850665 + LINC00540
Exon structure
Hs.255773 100506622
long intergenic non-protein coding RNA 540
19322942185 22958449 + GC13P022944



19422970934 22975013 + GC13P022972