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Display genomic neighborhood for:
genomic entity (gene/marker)
genomic coordinates

  Chromosome 11

   GeneLoc map region (34,510,400 - 38,593,156 bp) around gene/marker "RAG1"

   Explanation:
   RAG1 is located at 36,510,400-36,593,156 bp

# Start
(bp)
End
(bp)
StrandGene Unigene cluster Entrez Gene IdEnsembl Id Description
134478793 34513805 - ELF5
Exon structure
Hs.11713 2001 ENSG00000135374 E74-like factor 5 (ets domain transcription factor)
234533014 34557924 - ENSG00000255271
Exon structure


ENSG00000255271
334570876 34578608 + LOC105376623
Exon structure

105376623 ENSG00000255427
434573951 34593915 + GC11P034573



534575023 34594451 + GC11P034575



634621041 34663288 + EHF
Exon structure
Hs.653859 26298 ENSG00000135373 ets homologous factor
734674223 34710264 + NDUFB8P3
Exon structure

100132286
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, pseudogene 3
834685631 34703563 + GC11P034685



934709600 34710161 + ENSG00000271369
Exon structure


ENSG00000271369
1034742906 34743199 + ENSG00000270491
Exon structure


ENSG00000270491
1134781057 34784833 + GC11P034781



1234692784 34877212 + LOC102723568
Exon structure

102723568

1334791850 34791879 - PIR36408
Exon structure




1434793673 34794360 - GC11M034793



1534813373 34814968 - GC11M034814



1634824571 34825834 - LOC105376625
Exon structure

105376625

1734856839 34864657 - GC11M034856



1834853602 34875283 - LOC105376624
Exon structure

105376624

1934853094 34916499 - APIP
Exon structure
Hs.447794 51074 ENSG00000149089 APAF1 interacting protein
2034882741 34894935 - GC11M034882



2134941837 34941920 + MIR1343
Exon structure

100616437 ENSG00000251862 microRNA 1343
2234945112 34945187 + ENSG00000280915
Exon structure


ENSG00000280915
2334915829 35020591 + PDHX
Exon structure
Hs.502315 8050 ENSG00000110435 pyruvate dehydrogenase complex, component X
2434975355 34980815 + GC11P034975



2535009347 35012360 - GC11M035009



2635023691 35024668 - GC11M035023



2735050136 35067254 - LOC105376626
Exon structure

105376626

2835081656 35082075 + GC11P035081



2935086800 35097559 + LOC105376627
Exon structure

105376627

3035103188 35103444 + GC11P035103



3135111074 35111380 + GC11P035111



3235132650 35138032 - LOC100507144
Exon structure
Hs.673491 100507144 ENSG00000255521 Uncharacterized LOC100507144 (est)
3335176747 35186825 - LOC105376628
Exon structure

105376628

3435138870 35232402 + CD44
Exon structure
Hs.502328 960 ENSG00000026508 CD44 molecule (Indian blood group)
3535210054 35210181 + GC11P035210



3635210343 35214985 - ENSG00000255443
Exon structure


ENSG00000255443
3735212550 35214007 + ENSG00000251194
Exon structure


ENSG00000251194
3835281813 35286009 + ENSG00000255004
Exon structure


ENSG00000255004
3935251205 35420063 - SLC1A2
Exon structure
Hs.502338 6506 ENSG00000110436 solute carrier family 1 (glial high affinity glutamate transporter), member 2
4035374265 35374474 + ENSG00000215380
Exon structure


ENSG00000215380
4135411591 35414040 + GC11P035411



4235412099 35414309 - GC11M035412



4335419057 35421002 + ENSG00000255542
Exon structure


ENSG00000255542
4435431823 35530300 - PAMR1
Exon structure
Hs.55044 25891 ENSG00000149090 peptidase domain containing associated with muscle regeneration 1
4535579890 35583773 + GC11P035579



4635579430 35585310 - ENSG00000254669
Exon structure


ENSG00000254669
4735618187 35620873 + FJX1
Exon structure
Hs.39384 24147 ENSG00000179431 four jointed box 1
4835656694 35661339 + ENSG00000254686
Exon structure


ENSG00000254686
4935597642 35805427 - GC11M035597



5035662692 35818007 + TRIM44
Exon structure
Hs.192103 54765 ENSG00000166326 tripartite motif containing 44
5135814332 35818007 + GC11P035814



5235816336 35816364 + PIR35060
Exon structure




5335824184 35824211 + PIR45735
Exon structure




5435860654 35860744 - ENSG00000266590
Exon structure


ENSG00000266590
5535860185 35861585 - KRT18P14
Exon structure

119722 ENSG00000186082 keratin 18 pseudogene 14
5635915051 35918739 - ENSG00000254919
Exon structure


ENSG00000254919
5735967010 35968676 - LOC100420018
Exon structure

100420018 ENSG00000254672
5835972428 35989007 + ENSG00000255256
Exon structure


ENSG00000255256
5935997226 35997675 - GC11M035997



6035997148 35997766 - RPL12P31
Exon structure

100271406 ENSG00000241228 ribosomal protein L12 pseudogene 31
6136010098 36010204 + MIR3973
Exon structure

100616311 ENSG00000263389 microRNA 3973
6236020636 36034018 - GC11M036020



6336063283 36078277 - LOC101928510
Exon structure

101928510

6435943981 36232136 + LDLRAD3
Exon structure
Hs.745134 143458 ENSG00000179241 low density lipoprotein receptor class A domain containing 3
6536134403 36134431 + PIR54286
Exon structure




6636149155 36149182 + PIR39980
Exon structure




6736148180 36151184 - LOC105376630
Exon structure

105376630

6836161414 36173216 - GC11M036161



6936193468 36193496 + PIR46476
Exon structure




7036196248 36197901 + ENSG00000280321
Exon structure


ENSG00000280321
7136200536 36201976 - GC11M036200



7236203300 36203326 - PIR45055
Exon structure




7336214771 36214797 + PIR40336
Exon structure




7436246488 36250148 - GC11M036246



7536269284 36289449 - COMMD9
Exon structure
Hs.279836 29099 ENSG00000110442 COMM domain containing 9
7636321158 36323440 - ENSG00000254566
Exon structure


ENSG00000254566
7736356925 36356952 + PIR61917
Exon structure




7836377524 36379209 + GC11P036377



7936296175 36465204 + PRR5L
Exon structure
Hs.19987 79899 ENSG00000135362 proline rich 5 like
8036386521 36388250 + ENSG00000255186
Exon structure


ENSG00000255186
8136420742 36428106 - LOC105376629
Exon structure

105376629 ENSG00000255060
8236439806 36444614 + GC11P036439



8336483773 36487445 - GC11M036483



8436483767 36510313 - TRAF6
Exon structure
Hs.444172 7189 ENSG00000175104 TNF receptor-associated factor 6, E3 ubiquitin protein ligase
8536510360 36510537 + GC11P036512



8636510360 36510537 + GC11P036511



8736510361 36510537 + ENSG00000280331
Exon structure


ENSG00000280331
8836546050 36546547 - GC11M036546



8936510400 36593156 + RAG1
Exon structure
Hs.73958; Hs.677010 5896 ENSG00000166349 recombination activating gene 1
9036554328 36554446 + GC11P036554



9136555360 36557771 + GC11P036555



9236575574 36598279 - RAG2
Exon structure
Hs.714519 5897 ENSG00000175097 recombination activating gene 2
9336597326 36605480 - GC11M036597



9436594229 36659291 + C11orf74
Exon structure
Hs.159376 119710 ENSG00000166352 chromosome 11 open reading frame 74
9536644578 36655239 - GC11M036644



9636666678 36677720 + GC11P036666



9736696317 36697867 + LOC100422241
Exon structure

100422241 ENSG00000254498
9836709049 36710990 - LOC105376631
Exon structure

105376631

9936725580 36732204 + GC11P036725



10036810666 36813503 + GC11P036810



10136832762 36833884 + GC11P036832



10236989416 37032400 - GC11M036989



10337036760 37037972 - GC11M037036



10437086356 37090714 - GC11M037086



10537161340 37180189 - GC11M037161



10637199260 37201355 - GC11M037199



10737199108 37220581 + GC11P037199



10837212462 37216686 - GC11M037212



10937278322 37278417 + ENSG00000275364
Exon structure


ENSG00000275364
11037407788 37416394 + GC11P037407



11137434288 37468484 + GC11P037434



11237465148 37469520 - GC11M037465



11337471812 37489050 - LOC105376632
Exon structure

105376632

11437702125 37702220 - ENSG00000251838
Exon structure


ENSG00000251838
11537725666 37726456 + GC11P037725



11637725645 37726490 + RPL7AP56
Exon structure

100271536 ENSG00000242834 ribosomal protein L7a pseudogene 56
11737891514 37896250 + GC11P037891



11837938601 37954663 + LOC105376633
Exon structure

105376633 ENSG00000254516
11938013510 38014141 - ENSG00000279004
Exon structure


ENSG00000279004
12038211389 38212799 + LRRC6P1
Exon structure

100420589 ENSG00000254784 leucine rich repeat containing 6 pseudogene 1
12138200942 38337044 - LOC105376634
Exon structure

105376634

12238255856 38315122 + GC11P038255



12338415094 38499745 + GC11P038415



12438472584 38473142 - GC11M038472



12538498995 38500186 + ENSG00000255477
Exon structure


ENSG00000255477